Phlda2 (pleckstrin homology like domain family A member 2) - Rat Genome Database

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Gene: Phlda2 (pleckstrin homology like domain family A member 2) Chinchilla lanigera
Analyze
Symbol: Phlda2
Name: pleckstrin homology like domain family A member 2
RGD ID: 8814360
Description: INVOLVED IN animal organ morphogenesis (ortholog); placenta development (ortholog); regulation of cell migration (ortholog); ASSOCIATED WITH COVID-19 (ortholog); developmental and epileptic encephalopathy (ortholog); early infantile epileptic encephalopathy (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: pleckstrin homology-like domain family A member 2; pleckstrin homology-like domain, family A, member 2
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542214,617,794 - 14,619,595 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542214,617,794 - 14,619,595 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References


Genomics

Comparative Map Data
Phlda2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542214,617,794 - 14,619,595 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542214,617,794 - 14,619,595 (-)NCBIChiLan1.0ChiLan1.0
PHLDA2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl112,928,273 - 2,929,420 (-)EnsemblGRCh38hg38GRCh38
GRCh38112,928,273 - 2,929,420 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37112,949,503 - 2,950,650 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36112,906,079 - 2,907,226 (-)NCBINCBI36hg18NCBI36
Build 34112,906,078 - 2,907,226NCBI
Celera112,984,154 - 2,985,301 (-)NCBI
Cytogenetic Map11p15.4NCBI
HuRef112,737,934 - 2,739,081 (-)NCBIHuRef
CHM1_1112,948,223 - 2,949,370 (-)NCBICHM1_1
Phlda2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397143,055,282 - 143,056,882 (-)NCBIGRCm39mm39
GRCm39 Ensembl7143,055,282 - 143,056,887 (-)Ensembl
GRCm387143,501,545 - 143,503,145 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7143,501,545 - 143,503,150 (-)EnsemblGRCm38mm10GRCm38
MGSCv377150,687,453 - 150,688,429 (-)NCBIGRCm37mm9NCBIm37
MGSCv367143,310,938 - 143,311,914 (-)NCBImm8
Celera7143,257,236 - 143,258,212 (-)NCBICelera
Cytogenetic Map7F5NCBI
cM Map788.23NCBI
Phlda2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21198,696,897 - 198,699,292 (-)NCBI
Rnor_6.0 Ensembl1216,702,319 - 216,703,534 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01216,701,345 - 216,704,479 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01223,562,616 - 223,564,645 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41203,878,093 - 203,879,038 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11204,031,653 - 204,032,469 (-)NCBI
Celera1196,265,214 - 196,266,153 (-)NCBICelera
Cytogenetic Map1q42NCBI
PHLDA2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Mhudiblu_PPA_v0112,953,864 - 2,954,923 (-)NCBIMhudiblu_PPA_v0panPan3
PHLDA2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha1845,509,931 - 45,510,389 (-)NCBI
ROS_Cfam_1.01847,580,136 - 47,580,554 (-)NCBI
UMICH_Zoey_3.11847,025,433 - 47,025,891 (-)NCBI
UNSW_CanFamBas_1.01846,608,113 - 46,608,570 (-)NCBI
UU_Cfam_GSD_1.01847,354,692 - 47,355,110 (-)NCBI
PHLDA2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl22,057,679 - 2,058,694 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.122,057,679 - 2,058,675 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22427,845 - 428,693 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PHLDA2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.112,741,039 - 2,743,107 (-)NCBI
ChlSab1.1 Ensembl12,741,544 - 2,742,002 (-)Ensembl
Vero_WHO_p1.0NW_02366603899,941,908 - 99,946,453 (-)NCBI
Phlda2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476715,678,897 - 15,680,656 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000020243   ⟹   ENSCLAP00000020050
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495542214,617,794 - 14,619,595 (-)Ensembl
RefSeq Acc Id: XM_005384213   ⟹   XP_005384270
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542214,617,794 - 14,619,595 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005384270 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005384270   ⟸   XM_005384213
- Sequence:
RefSeq Acc Id: ENSCLAP00000020050   ⟸   ENSCLAT00000020243


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000013737 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000020050 ENTREZGENE
Ensembl Transcript ENSCLAT00000020243 ENTREZGENE
NCBI Gene Phlda2 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Phlda2  pleckstrin homology like domain family A member 2    pleckstrin homology-like domain, family A, member 2  Symbol and/or name change 5135510 APPROVED