Blzf1 (basic leucine zipper nuclear factor 1) - Rat Genome Database

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Gene: Blzf1 (basic leucine zipper nuclear factor 1) Chinchilla lanigera
Analyze
Symbol: Blzf1
Name: basic leucine zipper nuclear factor 1
RGD ID: 8812794
Description: ENCODES a protein that exhibits enzyme binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN Golgi organization (ortholog); Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH 1q24 Deletion Syndrome (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: golgin-45
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554627,855,075 - 7,879,186 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554627,856,650 - 7,879,659 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Blzf1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554627,855,075 - 7,879,186 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554627,856,650 - 7,879,659 (-)NCBIChiLan1.0ChiLan1.0
BLZF1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381169,368,195 - 169,396,575 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1169,367,970 - 169,396,540 (+)EnsemblGRCh38hg38GRCh38
GRCh371169,337,433 - 169,365,813 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361167,603,818 - 167,632,406 (+)NCBINCBI36Build 36hg18NCBI36
Build 341166,068,851 - 166,097,436NCBI
Celera1142,446,973 - 142,475,560 (+)NCBICelera
Cytogenetic Map1q24.2NCBI
HuRef1140,560,311 - 140,588,820 (+)NCBIHuRef
CHM1_11170,759,225 - 170,787,810 (+)NCBICHM1_1
T2T-CHM13v2.01168,723,507 - 168,751,898 (+)NCBIT2T-CHM13v2.0
Blzf1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391164,117,368 - 164,135,056 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1164,117,369 - 164,135,058 (-)EnsemblGRCm39 Ensembl
GRCm381164,289,799 - 164,307,487 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1164,289,800 - 164,307,489 (-)EnsemblGRCm38mm10GRCm38
MGSCv371166,219,931 - 166,237,615 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361166,126,475 - 166,144,159 (-)NCBIMGSCv36mm8
Celera1166,727,333 - 166,745,010 (-)NCBICelera
Cytogenetic Map1H2.2NCBI
cM Map171.6NCBI
Blzf1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81379,174,898 - 79,190,116 (-)NCBIGRCr8
mRatBN7.21376,641,757 - 76,656,977 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1376,641,515 - 76,656,999 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1379,260,202 - 79,275,396 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01380,564,207 - 80,579,401 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01377,818,963 - 77,834,176 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01382,592,170 - 82,607,379 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1382,592,170 - 82,607,379 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01387,476,063 - 87,491,192 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41380,057,361 - 80,073,350 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1376,374,933 - 76,390,178 (-)NCBICelera
Cytogenetic Map13q23NCBI
BLZF1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2180,381,293 - 80,401,733 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1180,049,693 - 80,070,132 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01144,850,261 - 144,870,672 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11148,572,418 - 148,592,827 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1148,572,418 - 148,592,827 (+)Ensemblpanpan1.1panPan2
BLZF1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1729,182,098 - 29,205,909 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl729,183,132 - 29,206,040 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha728,713,866 - 28,737,899 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0728,984,070 - 29,008,112 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl728,983,504 - 29,008,078 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1728,832,354 - 28,856,356 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0728,868,216 - 28,892,049 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0729,104,882 - 29,128,750 (-)NCBIUU_Cfam_GSD_1.0
Blzf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934499,413,678 - 99,433,899 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648117,260,472 - 17,281,309 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648117,261,399 - 17,280,642 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BLZF1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl481,571,300 - 81,639,577 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1481,597,312 - 81,639,788 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2489,221,984 - 89,260,668 (-)NCBISscrofa10.2Sscrofa10.2susScr3
BLZF1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12559,665,035 - 59,685,304 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2559,664,280 - 59,685,376 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605561,339,924 - 61,360,507 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Blzf1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248267,300,216 - 7,327,081 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSCLAT00000008968   ⟹   ENSCLAP00000008840
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554627,855,075 - 7,879,186 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000008969   ⟹   ENSCLAP00000008841
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554627,855,075 - 7,879,186 (-)Ensembl
RefSeq Acc Id: XM_005398201   ⟹   XP_005398258
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554627,856,650 - 7,879,659 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005398202   ⟹   XP_005398259
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554627,856,650 - 7,879,647 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013521407   ⟹   XP_013376861
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554627,856,650 - 7,879,659 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013521408   ⟹   XP_013376862
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554627,856,650 - 7,879,503 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013521409   ⟹   XP_013376863
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554627,856,650 - 7,879,504 (-)NCBI
Sequence:
RefSeq Acc Id: XP_005398258   ⟸   XM_005398201
- UniProtKB: A0A8C2V1C9 (UniProtKB/TrEMBL),   A0A8C2V6E6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005398259   ⟸   XM_005398202
- UniProtKB: A0A8C2V1C9 (UniProtKB/TrEMBL),   A0A8C2V6E6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013376861   ⟸   XM_013521407
- UniProtKB: A0A8C2V1C9 (UniProtKB/TrEMBL),   A0A8C2V6E6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013376863   ⟸   XM_013521409
- UniProtKB: A0A8C2V1C9 (UniProtKB/TrEMBL),   A0A8C2V6E6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013376862   ⟸   XM_013521408
- UniProtKB: A0A8C2V1C9 (UniProtKB/TrEMBL),   A0A8C2V6E6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000008840   ⟸   ENSCLAT00000008968
RefSeq Acc Id: ENSCLAP00000008841   ⟸   ENSCLAT00000008969


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000006177 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000008968 ENTREZGENE
  ENSCLAT00000008968.1 UniProtKB/TrEMBL
  ENSCLAT00000008969 ENTREZGENE
  ENSCLAT00000008969.1 UniProtKB/TrEMBL
InterPro Golgin-45 UniProtKB/TrEMBL
  Hsk3-like UniProtKB/TrEMBL
NCBI Gene Blzf1 ENTREZGENE
PANTHER GOLGIN-45 UniProtKB/TrEMBL
  PTHR13066 UniProtKB/TrEMBL
Pfam DASH_Hsk3 UniProtKB/TrEMBL
UniProt A0A8C2V1C9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C2V6E6 ENTREZGENE, UniProtKB/TrEMBL