Myog (myogenin) - Rat Genome Database

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Gene: Myog (myogenin) Chinchilla lanigera
Analyze
Symbol: Myog
Name: myogenin
RGD ID: 8811892
Description: ENCODES a protein that exhibits chromatin DNA binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to growth factor stimulus (ortholog); cellular response to lithium ion (ortholog); ASSOCIATED WITH Experimental Arthritis (ortholog); Experimental Autoimmune Myasthenia Gravis (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-DNA complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: myogenin (myogenic factor 4)
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540639,099,716 - 39,102,501 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540639,099,044 - 39,102,479 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
cellular response to estradiol stimulus  (ISO)
cellular response to growth factor stimulus  (ISO)
cellular response to lithium ion  (ISO)
cellular response to magnetism  (ISO)
cellular response to retinoic acid  (ISO)
cellular response to tumor necrosis factor  (ISO)
histone H3 acetylation  (ISO)
histone H4 acetylation  (ISO)
muscle cell differentiation  (ISO)
muscle organ development  (ISO)
myoblast differentiation  (ISO)
myotube differentiation  (ISO)
negative regulation of cell population proliferation  (ISO)
negative regulation of glycolytic process  (ISO)
ossification  (ISO)
positive regulation of muscle atrophy  (ISO)
positive regulation of myoblast differentiation  (ISO)
positive regulation of myotube differentiation  (ISO)
positive regulation of oxidative phosphorylation  (ISO)
positive regulation of skeletal muscle fiber development  (ISO)
positive regulation of transcription by RNA polymerase II  (ISO)
positive regulation of transcription, DNA-templated  (ISO)
regulation of cell cycle  (ISO)
regulation of myoblast fusion  (ISO)
regulation of skeletal muscle satellite cell proliferation  (ISO)
response to denervation involved in regulation of muscle adaptation  (ISO)
response to electrical stimulus involved in regulation of muscle adaptation  (ISO)
response to gravity  (ISO)
response to muscle activity  (ISO)
response to muscle activity involved in regulation of muscle adaptation  (ISO)
skeletal muscle atrophy  (ISO)
skeletal muscle fiber development  (ISO)
skeletal muscle tissue development  (ISO)
skeletal muscle tissue regeneration  (ISO)
striated muscle atrophy  (ISO)

Cellular Component

References


Genomics

Comparative Map Data
Myog
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540639,099,716 - 39,102,501 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540639,099,044 - 39,102,479 (-)NCBIChiLan1.0ChiLan1.0
MYOG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1203,083,129 - 203,086,012 (-)EnsemblGRCh38hg38GRCh38
GRCh381203,083,129 - 203,086,012 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371203,052,257 - 203,055,140 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361201,318,880 - 201,322,000 (-)NCBINCBI36hg18NCBI36
Build 341199,783,916 - 199,786,823NCBI
Celera1176,181,515 - 176,184,632 (-)NCBI
Cytogenetic Map1q32.1NCBI
HuRef1174,217,862 - 174,220,769 (-)NCBIHuRef
CHM1_11204,474,600 - 204,477,509 (-)NCBICHM1_1
Myog
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391134,217,742 - 134,220,286 (+)NCBIGRCm39mm39
GRCm39 Ensembl1134,217,727 - 134,220,286 (+)Ensembl
GRCm381134,290,004 - 134,292,548 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1134,289,989 - 134,292,548 (+)EnsemblGRCm38mm10GRCm38
MGSCv371136,186,581 - 136,189,125 (+)NCBIGRCm37mm9NCBIm37
MGSCv361136,106,424 - 136,108,961 (+)NCBImm8
Celera1136,900,556 - 136,903,100 (+)NCBICelera
Cytogenetic Map1E4NCBI
cM Map158.18NCBI
Myog
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21345,745,455 - 45,748,044 (+)NCBI
Rnor_6.0 Ensembl1351,126,459 - 51,129,048 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01351,126,459 - 51,129,048 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01356,182,747 - 56,185,336 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41347,243,712 - 47,246,301 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11347,257,754 - 47,260,344 (+)NCBI
Celera1346,073,572 - 46,076,161 (+)NCBICelera
Cytogenetic Map13q13NCBI
MYOG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11182,979,700 - 182,982,607 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1182,979,700 - 182,982,611 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01178,684,933 - 178,687,971 (-)NCBIMhudiblu_PPA_v0panPan3
MYOG
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.17112,116 - 114,604 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl7112,034 - 113,892 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha7167,989 - 170,338 (+)NCBI
ROS_Cfam_1.07122,772 - 125,124 (+)NCBI
UMICH_Zoey_3.17111,008 - 113,379 (+)NCBI
UNSW_CanFamBas_1.07220,521 - 222,887 (+)NCBI
UU_Cfam_GSD_1.07243,050 - 245,421 (+)NCBI
Myog
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934472,272,365 - 72,275,138 (+)NCBI
SpeTri2.0NW_0049365671,507,042 - 1,509,814 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MYOG
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9113,782,469 - 113,785,362 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.19113,783,233 - 113,785,312 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29125,243,803 - 125,245,882 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap9q2.1-q2.6NCBI
MYOG
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12526,264,872 - 26,269,652 (+)NCBI
ChlSab1.1 Ensembl2526,266,717 - 26,268,867 (+)Ensembl
Vero_WHO_p1.0NW_02366605527,042,619 - 27,045,566 (+)NCBI
Myog
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248077,742,926 - 7,753,149 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000020597   ⟹   ENSCLAP00000020400
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495540639,099,716 - 39,102,501 (-)Ensembl
RefSeq Acc Id: XM_005375246   ⟹   XP_005375303
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540639,099,785 - 39,102,479 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005375247   ⟹   XP_005375304
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540639,099,044 - 39,102,479 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005375303 (Get FASTA)   NCBI Sequence Viewer  
  XP_005375304 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005375304   ⟸   XM_005375247
- Sequence:
RefSeq Acc Id: XP_005375303   ⟸   XM_005375246
- Sequence:
RefSeq Acc Id: ENSCLAP00000020400   ⟸   ENSCLAT00000020597


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000013979 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000020400 ENTREZGENE
Ensembl Transcript ENSCLAT00000020597 ENTREZGENE
NCBI Gene Myog ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-23 Myog  myogenin    myogenin (myogenic factor 4)  Symbol and/or name change 5135510 APPROVED