Npbwr1 (neuropeptides B and W receptor 1) - Rat Genome Database

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Gene: Npbwr1 (neuropeptides B and W receptor 1) Chinchilla lanigera
Analyze
Symbol: Npbwr1
Name: neuropeptides B and W receptor 1
RGD ID: 8811862
Description: INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); regulation of metabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); schizophrenia (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: neuropeptides B/W receptor 1; neuropeptides B/W receptor type 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495545412,453,047 - 12,453,676 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Npbwr1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495545412,453,047 - 12,453,676 (+)NCBIChiLan1.0ChiLan1.0
NPBWR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38852,939,182 - 52,943,734 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl852,939,182 - 52,943,734 (+)EnsemblGRCh38hg38GRCh38
GRCh37853,851,742 - 53,856,294 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36854,015,021 - 54,016,007 (+)NCBINCBI36Build 36hg18NCBI36
Build 34854,015,020 - 54,016,007NCBI
Celera849,843,313 - 49,844,299 (+)NCBICelera
Cytogenetic Map8q11.23NCBI
HuRef849,319,868 - 49,320,854 (+)NCBIHuRef
CHM1_1853,904,190 - 53,905,176 (+)NCBICHM1_1
T2T-CHM13v2.0853,315,605 - 53,320,157 (+)NCBIT2T-CHM13v2.0
Npbwr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3915,983,926 - 5,987,617 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl15,983,926 - 5,987,617 (-)EnsemblGRCm39 Ensembl
GRCm3815,913,707 - 5,917,398 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl15,913,707 - 5,917,398 (-)EnsemblGRCm38mm10GRCm38
MGSCv3715,903,788 - 5,907,479 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3615,903,788 - 5,907,479 (-)NCBIMGSCv36mm8
Celera15,903,854 - 5,907,545 (-)NCBICelera
Cytogenetic Map1A1NCBI
cM Map11.89NCBI
Npbwr1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8518,282,180 - 18,285,622 (+)NCBIGRCr8
mRatBN7.2513,495,319 - 13,498,761 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl513,495,426 - 13,496,415 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx515,661,002 - 15,661,991 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0517,305,633 - 17,306,622 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0516,995,703 - 16,996,692 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0513,379,772 - 13,380,761 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl513,379,772 - 13,380,761 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0518,149,038 - 18,150,027 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4513,637,094 - 13,638,083 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1513,637,093 - 13,638,082 (+)NCBI
Celera512,903,127 - 12,904,116 (+)NCBICelera
Cytogenetic Map5q12NCBI
NPBWR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2768,574,398 - 68,579,711 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1844,299,388 - 44,301,866 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0849,363,390 - 49,368,499 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1846,745,428 - 46,746,949 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl846,745,428 - 46,746,414 (+)Ensemblpanpan1.1panPan2
NPBWR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1294,772,851 - 4,774,412 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl294,773,409 - 4,774,404 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha295,213,096 - 5,214,096 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0294,843,580 - 4,844,580 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl294,843,585 - 4,844,580 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1294,776,129 - 4,777,129 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0294,997,715 - 4,998,715 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0295,078,264 - 5,079,264 (+)NCBIUU_Cfam_GSD_1.0
Npbwr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530374,810,294 - 74,849,609 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493659036,377 - 38,899 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493659038,185 - 38,899 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NPBWR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl477,539,087 - 77,540,079 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1477,539,000 - 77,540,691 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2484,561,705 - 84,562,872 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NPBWR1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1849,049,142 - 49,053,037 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl849,049,238 - 49,050,224 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603992,938,770 - 92,945,140 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Npbwr1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247352,574,026 - 2,575,018 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247352,573,992 - 2,576,509 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005396121   ⟹   XP_005396178
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545412,453,047 - 12,453,676 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005396178 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_005396178   ⟸   XM_005396121
- Sequence:


Additional Information

Database Acc Id Source(s)
NCBI Gene Npbwr1 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-12-27 Npbwr1  neuropeptides B and W receptor 1    neuropeptides B/W receptor 1  Symbol and/or name change 5135510 APPROVED