Krt76 (keratin 76) - Rat Genome Database

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Gene: Krt76 (keratin 76) Chinchilla lanigera
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Symbol: Krt76
Name: keratin 76
RGD ID: 8804137
Description: INVOLVED IN epidermis development (ortholog); pigmentation (ortholog); sebaceous gland development (ortholog); ASSOCIATED WITH genetic disease (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: keratin 76, type II; keratin, type II cytoskeletal 2 oral
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545874,900 - 82,778 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545874,368 - 82,778 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Krt76
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545874,900 - 82,778 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545874,368 - 82,778 (-)NCBIChiLan1.0ChiLan1.0
KRT76
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381252,768,155 - 52,777,345 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1252,768,155 - 52,777,345 (-)EnsemblGRCh38hg38GRCh38
GRCh371253,161,939 - 53,171,129 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361251,448,206 - 51,457,372 (-)NCBINCBI36Build 36hg18NCBI36
Celera1252,808,167 - 52,817,357 (-)NCBICelera
Cytogenetic Map12q13.13NCBI
HuRef1250,205,903 - 50,215,092 (-)NCBIHuRef
CHM1_11253,128,708 - 53,137,898 (-)NCBICHM1_1
T2T-CHM13v2.01252,732,608 - 52,741,798 (-)NCBIT2T-CHM13v2.0
Krt76
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3915101,792,786 - 101,801,355 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl15101,792,786 - 101,801,355 (-)EnsemblGRCm39 Ensembl
GRCm3815101,884,351 - 101,892,920 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl15101,884,351 - 101,892,920 (-)EnsemblGRCm38mm10GRCm38
MGSCv3715101,714,782 - 101,723,351 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3615101,712,385 - 101,720,954 (-)NCBIMGSCv36mm8
Celera15104,036,162 - 104,044,727 (-)NCBICelera
Cytogenetic Map15F2NCBI
cM Map1557.1NCBI
Krt76
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87134,895,677 - 134,904,162 (-)NCBIGRCr8
mRatBN7.27133,016,990 - 133,025,475 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7133,016,992 - 133,025,496 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7134,778,683 - 134,786,640 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07137,008,203 - 137,016,160 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07136,986,858 - 136,994,815 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07143,488,668 - 143,497,108 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7143,488,684 - 143,497,108 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07141,286,688 - 141,294,636 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47140,582,232 - 140,590,180 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17140,658,668 - 140,666,617 (-)NCBI
Celera7129,455,787 - 129,463,758 (-)NCBICelera
Cytogenetic Map7q36NCBI
KRT76
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21041,415,390 - 41,424,576 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11241,412,153 - 41,421,339 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01235,983,069 - 35,992,201 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11236,761,017 - 36,770,200 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1236,761,017 - 36,770,200 (+)Ensemblpanpan1.1panPan2
KRT76
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1272,337,929 - 2,346,716 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2743,907,162 - 43,915,483 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0272,338,022 - 2,346,410 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl272,337,974 - 2,346,920 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1272,354,690 - 2,363,008 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0272,339,105 - 2,347,428 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02744,305,647 - 44,313,992 (-)NCBIUU_Cfam_GSD_1.0
KRT76
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11148,899,517 - 48,910,236 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1148,900,530 - 48,909,246 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037197,162,545 - 197,171,876 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


RefSeq Acc Id: ENSCLAT00000015076   ⟹   ENSCLAP00000014917
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495545874,900 - 82,778 (-)Ensembl
RefSeq Acc Id: XM_005397127   ⟹   XP_005397184
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545874,368 - 82,778 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013520810   ⟹   XP_013376264
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545874,368 - 82,778 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005397184 (Get FASTA)   NCBI Sequence Viewer  
  XP_013376264 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000014917
  ENSCLAP00000014917.1
RefSeq Acc Id: XP_005397184   ⟸   XM_005397127
- Peptide Label: isoform X1
- UniProtKB: A0A8C2YQ23 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013376264   ⟸   XM_013520810
- Peptide Label: isoform X2
- UniProtKB: A0A8C2YQ23 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000014917   ⟸   ENSCLAT00000015076
Protein Domains
IF rod


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000010290 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000015076 ENTREZGENE
  ENSCLAT00000015076.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.170 UniProtKB/TrEMBL
  Single helix bin UniProtKB/TrEMBL
  Vasodilator-stimulated phosphoprotein UniProtKB/TrEMBL
InterPro IF_conserved UniProtKB/TrEMBL
  IF_rod_dom UniProtKB/TrEMBL
  Keratin_2_head UniProtKB/TrEMBL
  Keratin_II UniProtKB/TrEMBL
NCBI Gene Krt76 ENTREZGENE
PANTHER GATA-TYPE DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  KERATIN, TYPE II CYTOSKELETAL 2 ORAL UniProtKB/TrEMBL
Pfam Filament UniProtKB/TrEMBL
  Keratin_2_head UniProtKB/TrEMBL
PRINTS TYPE2KERATIN UniProtKB/TrEMBL
PROSITE IF_ROD_1 UniProtKB/TrEMBL
  IF_ROD_2 UniProtKB/TrEMBL
SMART Filament UniProtKB/TrEMBL
Superfamily-SCOP Intermediate filament protein, coiled coil region UniProtKB/TrEMBL
UniProt A0A8C2YQ23 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Krt76  keratin 76    keratin 76, type II  Symbol and/or name change 5135510 APPROVED
2015-08-25 Krt76  keratin 76, type II    keratin 76  Symbol and/or name change 5135510 APPROVED