| Gene: Tex13c (TEX13 family member C) Chinchilla lanigera |
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Analyze |
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| Symbol: |
Tex13c |
| Name: |
TEX13 family member C |
| RGD ID: |
8803940 |
| Description: |
ASSOCIATED WITH autistic disorder (ortholog) |
| Type: |
protein-coding
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| RefSeq Status: |
MODEL |
| Previously known as: |
LOC102028852; uncharacterized LOC102028852; uncharacterized protein LOC102028852 |
| RGD Orthologs |
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| Alliance Genes |
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| More Info |
more info ...
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| More Info |
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| Latest Assembly: |
ChiLan1.0 - Chinchilla ChiLan1.0 Assembly |
| Position: |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 | NW_004955473 | 9,425,572 - 9,428,326 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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| JBrowse: |
View Region in Genome Browser (JBrowse)
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| Model |
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Imported Disease Annotations - ClinVar
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References
Genomics
Comparative Map Data
Tex13c
(Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 | NW_004955473 | 9,425,572 - 9,428,326 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TEX13C
(Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | X | 125,319,871 - 125,325,214 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 125,319,871 - 125,325,216 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | X | 124,453,720 - 124,459,063 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | X | 124,281,650 - 124,284,631 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | X | 124,839,807 - 124,842,788 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q25 | NCBI | | | | | HuRef | X | 113,831,881 - 113,834,553 (+) | NCBI | | HuRef | | | CHM1_1 | X | 124,364,988 - 124,367,969 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 123,631,873 - 123,637,216 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Tex13c1
(Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | X | 42,679,866 - 42,682,407 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | X | 42,680,037 - 42,682,409 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | X | 43,590,989 - 43,593,530 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | X | 43,591,160 - 43,593,532 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | X | 40,944,337 - 40,946,178 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | X | 40,944,337 - 40,946,151 (+) | NCBI | | MGSCv36 | mm8 | | Celera | X | 31,131,050 - 31,132,672 (+) | NCBI | | Celera | | | Cytogenetic Map | X | A4 | NCBI | | | | | cM Map | X | 23.58 | NCBI | | | | |
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Tex13c
(Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | X | 127,342,431 - 127,344,933 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | X | 122,469,125 - 122,471,627 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | X | 122,469,079 - 122,471,628 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | X | 124,597,984 - 124,600,486 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | X | 128,119,379 - 128,121,881 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | X | 125,682,049 - 125,684,551 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | X | 130,007,087 - 130,009,589 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 130,007,087 - 130,009,588 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | X | 130,084,439 - 130,086,941 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | X | 1,437,228 - 1,438,949 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | X | 121,569,779 - 121,572,281 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q35 | NCBI | | | | |
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TEX13C
(Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | X | 124,797,701 - 124,802,389 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | X | 124,801,313 - 124,806,001 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | X | 114,516,749 - 114,519,112 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | X | 124,688,171 - 124,690,283 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
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TEX13D
(Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | X | 95,724,776 - 95,738,842 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | X | 81,791,879 - 81,805,942 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | X | 97,509,405 - 97,523,468 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | X | 97,509,619 - 97,511,658 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | X | 94,940,612 - 94,954,675 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | X | 96,697,180 - 96,711,144 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | X | 96,486,709 - 96,501,000 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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TEX13C
(Sus scrofa - pig) |
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TEX13C
(Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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Vero_WHO_p1.0 | NW_023666065 | 38,093,727 - 38,096,476 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Tex13c
(Heterocephalus glaber - naked mole-rat) |
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Expression
Sequence
| RefSeq Acc Id: |
XM_005401296 ⟹ XP_005401353 |
| Type: |
CODING |
| Position: |
| Chinchilla Assembly | Chr | Position (strand) | Source |
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ChiLan1.0 | NW_004955473 | 9,425,572 - 9,428,326 (-) | NCBI |
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| Sequence: |
ATGGCGGTGGATCTCGGGGACCCCAACAATGGCTTCCGCCATGCTGATGTGATGCAGTTCATTA
ACAGTGAAATCTGCAGTAATGGTGGGGACTCAGACTTTTATTTAACCTTCCGCTCGCGGTCCTG
GAAAGAGGTAGAGGACGGCCTTCACACGATCCTGGCCGACCAGCAGGTGGCGCTCGAGCGCAAG
AGGGCCAGTACCTGGAGCGCACTGGCCCTAGGGGTGCGAGCGGCCGCCAGGCTGCAGGAGCAGC
AGGGAGAGCTGCTCCAGCGGCTGCAGAAGCAGATGGAGGAGCACGAGACAGGTTACTGGGCTCT
GGCATCTGAGACGCAGAGGATGCGTGGCGAGCGAGACCAGGCTACAGCACAGCTGCACCTCCTG
AGGGCTGCCCTGCGGCAGGCTTTGGATGAGCGCGAAATGTTTCGCAGGAAGCTGCTCCAGGCCG
AGTGGTTAGCACAGGCCCATTCACTGCCCCAGGAAGTTGTACTTATTCCGGGAACTGAACAACA
CAGGGCTGCACAGTGGCTCGTTGGTGCACAGAAGCAAACAGGTGAAATGGCCGCCAGGGCTCAG
GGTACGCCACATTTGGGGACCCAGATGCCAGCTCCAAGAACCTTGCTTTATGTCCAAGAACCCC
CGAGGTCTTGGGCCCAGCCAGTGCCCCCACCGCTGCGAGTTCCTGTGCCACATCAATTCCCATT
CCATGCACCATTTCCAGTGAGAGTCCCATACTCAACACCTCTGCCATTCCCAGCAGTAATGGGA
TCAGAAGCAACAGCAACAACGACAGCAGGAATGGAAGCAGGTGAACCCCGTTTGTTGCCTACAG
AGATGTACCTTCAGGGCTTCTTGGCTGCAGTGGGGTCCCAAGAAGAGGCGGCTCCTCTGTGGGA
CCAGAGTCAGGGTACACATTCTGAGAACATCCAGGATGGGGGTCATCAGGAAGACGGCGGAAGC
CACAGGGCAGAGAAAAATCCTGAGTGTCCCCAGGAAATGACTTCCACGGGGAACAGCAGTAAAT
ACAGCAAGGAAGAAGTTTCAAAGAAGCCCCAAGAGACAGACACCTTGGGGAACAGCAGCAGCTA
CAGCTGGAAGGAAGAGGAGGTAAAGCTCCAGGGGACAGCTTCCCTGGGTGACAGCAGCAGCCAC
ACACAAAAGGAAGATCCTCAGTGTTGCAAGGGAATGGCTCCCCTGGGGAATAGCAGTAGCCACC
GCCAGCAAGAAGTTTCAGAGGGGTCCCAGGAGACAGGTACCCTGGGTGACAGCAGCAGCCACGG
TCAGAAGGAAGAGTTGGTGGTGCCCCTGAGTATGACTGCCCTGGAGGGTAGCAGCAGTCAGAGC
CAGAAGGAAGAGGTGGTGAAGCCACAGGAGACAGCCGTCCTAGTTGACGGTAGCAGCCACAGCC
AGAAGGAGGAGATGGTGGTGCCCCAGGGGATGGCTCCTCCGGGGGATAGTAAGATCCAGGATGT
GATGCAAAGCCACACGAAACAGCAGGTTAAGATACAGAAGGCCAAGCAACCACGAAGAAGAAAA
GCCTCAAAATCTCAGCAACAGAAGTCTGTCTCACAAGGTAGTCCAGACAATTGGGTCTGCTCGC
GGTGTAAAGGTGTGAATCCTTCAAGTCGGGTTTCCTGCCACAAATGTCGGAAGATCTGCAAGCC
AGGTGAAAGTGGAGGTGCTGACTCCGAACAAACTCACTGATTTCAGGAAGGTGGTGGATTCTCA
AGTTGAAGTTGTAAAACCCTTTTAGCCCCTCTTTTTTCAGTTTTCTTCTTAACCTTTTTCTGGC
TGGCAGCAGCCTTGTGGTTTTTGACTTAAAAGTTTTATAGGTGAAGTTCTGTTTTTGTGTCTCA
TTCCCATTGAACTTGCTTGTTGCTGAAGAAGCTGAACCTGTCACTTTGGAAGCTCTCCCCATGG
CTGAAAGATGTCACGTTGGAAGCTCTCCCCAGGGCTGAAAGATGTAAGACCTCGATTATGGTAG
ACTCACACTTCAGAGAGATCCTCACTGCCTAGAGTCAAGAAGAGTGAAAAGAAGTCAGCGAAGG
AAGGAGAGAGCCTTTGGAACTCATTAGGAGACAGTGCAAAACAAAATAGTTGTGTTAGTACTTA
ATTTCTCTGTATGGGACAAGAGACTAACTTGCAAGACTTTGGGGATAGTTTCAGTGTTACACTG
TATATATGAAAGCAAACTTGATTCATTTCATCTAATTCATTAGACAATTACTGATTGCTTAGTG
TTCATTAGGAGTTGAAACTATACAGTATTAACGAGTGCGCACATAATTTTTTTGTGAAATTAGA
TAACAGAAAGAGCATAACTTGGGATTAATATTATATCAGGAATGGCTTCTTTGCCTT
hide sequence
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| RefSeq Acc Id: |
XP_005401353 ⟸ XM_005401296 |
| - Sequence: |
MAVDLGDPNNGFRHADVMQFINSEICSNGGDSDFYLTFRSRSWKEVEDGLHTILADQQVALERK
RASTWSALALGVRAAARLQEQQGELLQRLQKQMEEHETGYWALASETQRMRGERDQATAQLHLL
RAALRQALDEREMFRRKLLQAEWLAQAHSLPQEVVLIPGTEQHRAAQWLVGAQKQTGEMAARAQ
GTPHLGTQMPAPRTLLYVQEPPRSWAQPVPPPLRVPVPHQFPFHAPFPVRVPYSTPLPFPAVMG
SEATATTTAGMEAGEPRLLPTEMYLQGFLAAVGSQEEAAPLWDQSQGTHSENIQDGGHQEDGGS
HRAEKNPECPQEMTSTGNSSKYSKEEVSKKPQETDTLGNSSSYSWKEEEVKLQGTASLGDSSSH
TQKEDPQCCKGMAPLGNSSSHRQQEVSEGSQETGTLGDSSSHGQKEELVVPLSMTALEGSSSQS
QKEEVVKPQETAVLVDGSSHSQKEEMVVPQGMAPPGDSKIQDVMQSHTKQQVKIQKAKQPRRRK
ASKSQQQKSVSQGSPDNWVCSRCKGVNPSSRVSCHKCRKICKPGESGGADSEQTH
hide sequence
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Additional Information
Nomenclature History
| Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
| 2016-08-16 |
Tex13c |
TEX13 family member C |
LOC102028852 |
uncharacterized LOC102028852 |
Symbol and/or name change |
5135510 |
APPROVED |
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