Padi3 (peptidyl arginine deiminase 3)

Gene: Padi3 (peptidyl arginine deiminase 3) Chinchilla lanigera

Analyze

Symbol:

Padi3

Name:

peptidyl arginine deiminase 3

RGD ID:

8802335

Description:

ENCODES a protein that exhibits identical protein binding (ortholog); protein-arginine deiminase activity (ortholog); ASSOCIATED WITH Central Centrifugal Cicatricial Alopecia (ortholog); chromosome 1p36 deletion syndrome (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intracellular membrane-bounded organelle (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

peptidyl arginine deiminase, type III; protein-arginine deiminase type-3

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955527	1,582,025 - 1,608,465 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955527	1,582,065 - 1,608,455 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Central Centrifugal Cicatricial Alopecia (ISO)

chromosome 1p36 deletion syndrome (ISO)

genetic disease (ISO)

Uncombable Hair Syndrome (ISO)

Uncombable Hair Syndrome 1 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

cytoplasm (ISO)

cytosol (ISO)

intracellular membrane-bounded organelle (ISO)

nucleoplasm (ISO)

Molecular Function

identical protein binding (ISO)

protein binding (ISO)

protein-arginine deiminase activity (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Padi3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955527	1,582,025 - 1,608,465 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955527	1,582,065 - 1,608,455 (-)	NCBI	ChiLan1.0	ChiLan1.0

PADI3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	17,249,098 - 17,284,233 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	17,249,098 - 17,284,233 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	17,575,593 - 17,610,728 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	17,448,180 - 17,483,315 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	17,320,898 - 17,356,031	NCBI
Celera	1	15,898,287 - 15,933,417 (+)	NCBI		Celera
Cytogenetic Map	1	p36.13	NCBI
HuRef	1	15,819,256 - 15,854,324 (+)	NCBI		HuRef
CHM1_1	1	17,684,024 - 17,719,148 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	17,060,334 - 17,095,464 (+)	NCBI		T2T-CHM13v2.0

Padi3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	140,512,680 - 140,537,959 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	140,512,676 - 140,537,959 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	140,785,369 - 140,810,648 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	140,785,365 - 140,810,648 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	140,341,284 - 140,366,563 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	140,057,445 - 140,082,724 (-)	NCBI		MGSCv36	mm8
Celera	4	142,596,501 - 142,623,198 (-)	NCBI		Celera
Cytogenetic Map	4	D3	NCBI
cM Map	4	72.5	NCBI

Padi3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	158,372,764 - 158,400,193 (-)	NCBI		GRCr8
mRatBN7.2	5	153,089,717 - 153,117,146 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	153,089,717 - 153,117,146 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	155,778,809 - 155,806,336 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	157,553,201 - 157,580,646 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	157,541,767 - 157,569,268 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	159,309,000 - 159,336,429 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	159,309,000 - 159,336,429 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	163,015,782 - 163,042,857 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	159,641,260 - 159,669,304 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	159,651,447 - 159,679,492 (-)	NCBI
Celera	5	151,447,226 - 151,474,655 (-)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

PADI3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	209,845,190 - 209,881,860 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	208,964,043 - 209,000,620 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	16,193,461 - 16,228,942 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	17,249,084 - 17,283,926 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	17,249,084 - 17,283,926 (+)	Ensembl	panpan1.1		panPan2

PADI3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	80,966,034 - 80,993,937 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	80,905,391 - 80,993,973 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	77,504,285 - 77,531,447 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	81,614,443 - 81,641,583 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	81,560,677 - 81,641,599 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	78,367,334 - 78,394,511 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	79,383,133 - 79,410,286 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	80,452,792 - 80,479,978 (-)	NCBI		UU_Cfam_GSD_1.0

Padi3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	38,340,793 - 38,366,667 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936474	4,165,597 - 4,191,449 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936474	4,165,597 - 4,191,449 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PADI3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	75,874,229 - 75,909,509 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	75,874,219 - 75,910,213 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	70,217,534 - 70,252,847 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PADI3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	115,300,975 - 115,339,002 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	115,302,123 - 115,338,551 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	781,080 - 817,000 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Padi3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624764	2,827,682 - 2,852,353 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624764	2,827,665 - 2,853,247 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005409816	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013507408	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013507409	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013507410	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001231973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01069410	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01069411	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01049983	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000005280 ⟹ ENSCLAP00000005185

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955527	1,582,025 - 1,608,465 (-)	Ensembl

RefSeq Acc Id:

ENSCLAT00000005281 ⟹ ENSCLAP00000005186

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955527	1,582,025 - 1,600,724 (-)	Ensembl

RefSeq Acc Id:

XM_005409816 ⟹ XP_005409873

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955527	1,582,065 - 1,608,455 (-)	NCBI

Sequence:

show sequence

GTGGCCCAAGCCCAGTCCAAGGCCAGCATGTCGCTGCAGAGGATCGTGCGCGTGTCCCTGGAGC
ATCCCACCAGTGCTGTGTGCGTGGTTGGCGTGGAGACTGTCGTGGACATATATGGATCGGTTCC
CGAGGGCACAGACATGTTCGAGGTCTACGGGACCCCGGGGGTGGACGTCTACGTCTCTCCCAGC
ACGGAGAGGAGCCGGGAGCGGCGCGCTGACCTCAGGCGGTGGCACTTCGACGAGGGCCTGGAGA
TCATCGTGGTCATGAACTCCCCCAGCAACGACCTCAACGACAGTCACGTGCAGATTTCCTACCA
CTCCAGCCGTGAGTCTCTGCCCCTGGCCTATGCTGTGCTGTACCTCACCTGTGTGGACATCACC
CTGGACTGCAACCTGAACTATGAGGGCAGGCAAGAGAAGAGCTTCGTAGACAAGCGGCAGTGGG
TCTGGGGGCCTGGTGGGTATGGAGCTATCTTGCTGGTGAACTGTGACAGGGACGATCTGGCCTG
TGATGTCCCGGACAACTGTGACCAGTGCGTGCGCTGCCTGCAAGATCTGGAAGACATGTCTGTC
ATGGTCCTGCGGACCCAGGGCCCTGCAGCTCTCTTTGACGACCACAAACTTATCCTCCACACCT
CTAGTTATGATGCCCAGCGGGCACGGGTCTTCCATGTGTGCGGCCCTGAGGACTCCTGTGAGGC
CTACAAGTGCGTGCTGGGCCAGGACAAGGTGTCCTACGAGGTGCCGCATCTCCATGGGGACGAG
GAGCGCTTCTTCGTGGAGGGCCTCTCCTTCCCCGACGCTGGCTTCCCAGGGCTTATTTCCTTCC
ATGTCACCCTGCTGGATGACTCCAATGAGGACTTCTCCGAGACCCCAATCTTCACTGACTCCGT
GGTGTTCCGGGTGGCACCTTGGATCATGACGCCCAGCACCCTGCCGCCCCTGGAGGTGTACGTG
TGCCGGGTGAGGAACAACACGCGTTTTGTGGAAGCTGTGGCGGAGCTGGCGAGTCAGGCAGGCT
GCAAGCTGACCATCTGTCCGCAGACCGAGAACCGCAACGACCGCTGGATCCAGGACGAGATGGA
GCTAGGCTATGTGGAGGCGCCGCACAAGACCTTCCCTGTGGTCTTCGATTCCCCCAGGAATGGG
GAGCTGCAGGAGTTCCCTTACAAAAGGATCCTGGGGACAGATTTTGGCTACGTGACTCGGGAAC
CACGAGACAAGTCCGTGAGTGGCCTAGACTCCTTTGGGAACCTGGAGGTCAGCCCCCCAGTGGT
GGCCAACGGGAAGGAGTACCCCCTGGGGCGGATCCTCATCGGGGGCAACCTGCCTGGGTCAAAG
GGCCGCAGGGTCACCCAGGTGGTGCGGAACTTCCTCCACGCACAGAAGGTACAGCCGCCTGTAG
AGCTCTTCGTGGACTGGCTGGCCGTGGGCCACGTGGATGAGTTCCTGAGCTTTGTCCCTGCCCC
GGATGGGAAGGGCTTCCGGATGCTCCTGGCCAGTCCCGCCGCCTGCTTCCGGCTCTTCCAGGAG
AAGCGGAAATGGGGCCATGGCAGGGCCCTCCTCTTCCAGGGGGTTGTTGGTGACAGGCAGGTCC
GGACCATCTCCATCGACCAGGTCCTTTCCAATAGAAACCTCATCAGCTTTAATAAGTTTGTGCA
GAGCTGCATCGACTGGAACCGTGAGGTGCTGAAGCGGGAGCTGGGCCTGGCAGATCAGGACATC
ATCGACATCCCGCAGCTCTTCAAGTCCGAGCAGAAAAAGGCGATGGCTTTCTTCCCTGACTTGG
TGAATATGCTGGTGCTGGGGAAGTACTTGGGCATCCCCAAGCCCTTTGGGCCGGTCATCAACGG
CCGCTGCTGCCTGGAGGAGAAGGTGCGCTCGCTGCTGGAGCCGCTGGGCCTCCACTGCACCTTC
ATCGATGACTTCACCCCCTACCACCTGCTGCATGGGGAGGTGCACTGCGGCACTAACGTGCGCC
GGAAGCCCTTTGATTTCAAGTGGTGGAACATGGTGCCCTGAGCCAGCTCCCACCCACTTCCTCC
CTGGGTGGGGCATCGGAGCTGGTCCCTGAACAGTGAGCCTCCAGAGACCCCCGGGTTCCAGACA
GAATGCTGAGGGTGACTGTCCCCCTCGGAAGCCCCTTCCCTAAGGGTCCATGCCCCACCTGTAA
CACATTTGGCTCCCCTACATGAATACTCTTGGCCTCCCATAGAGGACTTCATTTCTTGTGCCCT
CCTAAGTGGATCAACAGGACCCACACAGACTCCCCTCAGAATCCCCTTTCATAGCGCCCCAAAC
CTCCTGTTTGGCACCAAGTTCACTTTGGGGTCTAGAAACATCCATCTCGTTAGCCCCCTTGCCC
TGTGCGTGCTCACGGAGGAAGCCCCACGTGGGAGCAATGCTAGAGTCGCAGCACTCTACGCAGG
ACGGGGCGGAGCTGCGGGTCCATTTCGGGCAAAGTGGGGCCGTCACTCCCACTCTGTGCCCTTC
TGTCCCGCCCGGCCTGAGCCCTCACGTGGCGGATGCCTCTAGGTGGGCGTGGATGGAATGATAG
TTGTATCTTAGCCTTATACACCTCCCACCATTGGACATTCAGAACAATGGCTTTGTCCAAAACG
CTCCTGGAATTTCTTGGAGGCGAGAGTGTCTCAGGATGCTGAAGACTCGGAGGCCTGGGTCCAA
GGACAAAAAGTGTCTCTTACATCACACAGAGCTGACCCTGGTGACCACCCTGTGCAGGTGGGAA
GAGCCTGGAGGACACGGCCCTCAACCTTCTGTTGACATCCTGCCATGCTGCAGAGCTCGAGACA
GCTCTGGAGGGGACAGCTCCGGGAATGAGCCCGCTCTCAGGGCAGAGGGTGGGCAAGAGCTTGG
TTTCCTCAAAGCGGGTATCAGTTTTGTCTGTGCTATGTGTGGGTCCAGCTGGGTTTCAGTTACT
GGCTAATAAATCAACAGAAACACA

hide sequence

RefSeq Acc Id:

XM_013507408 ⟹ XP_013362862

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955527	1,582,065 - 1,600,723 (-)	NCBI

Sequence:

show sequence

GGGGACCCCGAGATGAGGGGATGCGCAGGCTGGTTTCTGAGCAGGATCCCTAGCTTACTGGGAA
TGGGGGAGACACAGTTTCAGCATTTTAAGCCTAGCAGCACCATCTGGCTGTTTGACCAGCTCAG
GGCCTGCTTTTCCAGGTGCCCCTGCAGCGGTTCCCAATAGCCTGGGCTCCAAGTCAGAGGCCTG
TGTGTAAACCTATCTCTGCCATTTGATGCTGTGTGACCCGTTTGTTACTAGACCTCTCTGAGCC
TCTGTTTCCCACCTATAAGTGGGATACTGCTGTGCACCCTGCAGACTTGTGAAAGGAAGTGGAA
AGTGCACACAGTAATACCCGCTGGGGGGACTCTGAGGACACCTCATCCCCTGCCAAGGAGACAG
GAGGGGTCTTGGGATGCAAAGTGCTCCTCTTAAAGCTACAGTCACAGAACCACTAGGGCGTCCA
CTCATTGCTGCTGACTCCGGTTCTGGGCTCCGTGGGGTTCTGTCCTCCTGGGAGGTCAGGAAAC
GCACAAGGCGATGTTTGTGGCCGTGGAGCCTGGAACGTGGGACGGGGATCTGAGTGGCCCAGCC
CGGGAGACTGGAGAAGGCTTGGGGAGGAATCAGGGCCGTGTCCCTCAGCGCGGCCCATGGCTCC
CTGTCCTTCCCAGATCGGTTCCCGAGGGCACAGACATGTTCGAGGTCTACGGGACCCCGGGGGT
GGACGTCTACGTCTCTCCCAGCACGGAGAGGAGCCGGGAGCGGCGCGCTGACCTCAGGCGGTGG
CACTTCGACGAGGGCCTGGAGATCATCGTGGTCATGAACTCCCCCAGCAACGACCTCAACGACA
GTCACGTGCAGATTTCCTACCACTCCAGCCGTGAGTCTCTGCCCCTGGCCTATGCTGTGCTGTA
CCTCACCTGTGTGGACATCACCCTGGACTGCAACCTGAACTATGAGGGCAGGCAAGAGAAGAGC
TTCGTAGACAAGCGGCAGTGGGTCTGGGGGCCTGGTGGGTATGGAGCTATCTTGCTGGTGAACT
GTGACAGGGACGATCTGGCCTGTGATGTCCCGGACAACTGTGACCAGTGCGTGCGCTGCCTGCA
AGATCTGGAAGACATGTCTGTCATGGTCCTGCGGACCCAGGGCCCTGCAGCTCTCTTTGACGAC
CACAAACTTATCCTCCACACCTCTAGTTATGATGCCCAGCGGGCACGGGTCTTCCATGTGTGCG
GCCCTGAGGACTCCTGTGAGGCCTACAAGTGCGTGCTGGGCCAGGACAAGGTGTCCTACGAGGT
GCCGCATCTCCATGGGGACGAGGAGCGCTTCTTCGTGGAGGGCCTCTCCTTCCCCGACGCTGGC
TTCCCAGGGCTTATTTCCTTCCATGTCACCCTGCTGGATGACTCCAATGAGGACTTCTCCGAGA
CCCCAATCTTCACTGACTCCGTGGTGTTCCGGGTGGCACCTTGGATCATGACGCCCAGCACCCT
GCCGCCCCTGGAGGTGTACGTGTGCCGGGTGAGGAACAACACGCGTTTTGTGGAAGCTGTGGCG
GAGCTGGCGAGTCAGGCAGGCTGCAAGCTGACCATCTGTCCGCAGACCGAGAACCGCAACGACC
GCTGGATCCAGGACGAGATGGAGCTAGGCTATGTGGAGGCGCCGCACAAGACCTTCCCTGTGGT
CTTCGATTCCCCCAGGAATGGGGAGCTGCAGGAGTTCCCTTACAAAAGGATCCTGGGGACAGAT
TTTGGCTACGTGACTCGGGAACCACGAGACAAGTCCGTGAGTGGCCTAGACTCCTTTGGGAACC
TGGAGGTCAGCCCCCCAGTGGTGGCCAACGGGAAGGAGTACCCCCTGGGGCGGATCCTCATCGG
GGGCAACCTGCCTGGGTCAAAGGGCCGCAGGGTCACCCAGGTGGTGCGGAACTTCCTCCACGCA
CAGAAGGTACAGCCGCCTGTAGAGCTCTTCGTGGACTGGCTGGCCGTGGGCCACGTGGATGAGT
TCCTGAGCTTTGTCCCTGCCCCGGATGGGAAGGGCTTCCGGATGCTCCTGGCCAGTCCCGCCGC
CTGCTTCCGGCTCTTCCAGGAGAAGCGGAAATGGGGCCATGGCAGGGCCCTCCTCTTCCAGGGG
GTTGTTGGTGACAGGCAGGTCCGGACCATCTCCATCGACCAGGTCCTTTCCAATAGAAACCTCA
TCAGCTTTAATAAGTTTGTGCAGAGCTGCATCGACTGGAACCGTGAGGTGCTGAAGCGGGAGCT
GGGCCTGGCAGATCAGGACATCATCGACATCCCGCAGCTCTTCAAGTCCGAGCAGAAAAAGGCG
ATGGCTTTCTTCCCTGACTTGGTGAATATGCTGGTGCTGGGGAAGTACTTGGGCATCCCCAAGC
CCTTTGGGCCGGTCATCAACGGCCGCTGCTGCCTGGAGGAGAAGGTGCGCTCGCTGCTGGAGCC
GCTGGGCCTCCACTGCACCTTCATCGATGACTTCACCCCCTACCACCTGCTGCATGGGGAGGTG
CACTGCGGCACTAACGTGCGCCGGAAGCCCTTTGATTTCAAGTGGTGGAACATGGTGCCCTGAG
CCAGCTCCCACCCACTTCCTCCCTGGGTGGGGCATCGGAGCTGGTCCCTGAACAGTGAGCCTCC
AGAGACCCCCGGGTTCCAGACAGAATGCTGAGGGTGACTGTCCCCCTCGGAAGCCCCTTCCCTA
AGGGTCCATGCCCCACCTGTAACACATTTGGCTCCCCTACATGAATACTCTTGGCCTCCCATAG
AGGACTTCATTTCTTGTGCCCTCCTAAGTGGATCAACAGGACCCACACAGACTCCCCTCAGAAT
CCCCTTTCATAGCGCCCCAAACCTCCTGTTTGGCACCAAGTTCACTTTGGGGTCTAGAAACATC
CATCTCGTTAGCCCCCTTGCCCTGTGCGTGCTCACGGAGGAAGCCCCACGTGGGAGCAATGCTA
GAGTCGCAGCACTCTACGCAGGACGGGGCGGAGCTGCGGGTCCATTTCGGGCAAAGTGGGGCCG
TCACTCCCACTCTGTGCCCTTCTGTCCCGCCCGGCCTGAGCCCTCACGTGGCGGATGCCTCTAG
GTGGGCGTGGATGGAATGATAGTTGTATCTTAGCCTTATACACCTCCCACCATTGGACATTCAG
AACAATGGCTTTGTCCAAAACGCTCCTGGAATTTCTTGGAGGCGAGAGTGTCTCAGGATGCTGA
AGACTCGGAGGCCTGGGTCCAAGGACAAAAAGTGTCTCTTACATCACACAGAGCTGACCCTGGT
GACCACCCTGTGCAGGTGGGAAGAGCCTGGAGGACACGGCCCTCAACCTTCTGTTGACATCCTG
CCATGCTGCAGAGCTCGAGACAGCTCTGGAGGGGACAGCTCCGGGAATGAGCCCGCTCTCAGGG
CAGAGGGTGGGCAAGAGCTTGGTTTCCTCAAAGCGGGTATCAGTTTTGTCTGTGCTATGTGTGG
GTCCAGCTGGGTTTCAGTTACTGGCTAATAAATCAACAGAAACACA

hide sequence

RefSeq Acc Id:

XM_013507409 ⟹ XP_013362863

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955527	1,582,065 - 1,600,724 (-)	NCBI

Sequence:

show sequence

CGGGGACCCCGAGATGAGGGGATGCGCAGGCTGGTTTCTGAGCAGGATCCCTAGCTTACTGGGA
ATGGGGGAGACACAGTTTCAGCATTTTAAGCCTAGCAGCACCATCTGGCTGTTTGACCAGCTCA
GGGCCTGCTTTTCCAGGTGCCCCTGCAGCGGTTCCCAATAGCCTGGGCTCCAAGTCAGAGGCCT
GTGTGTAAACCTATCTCTGCCATTTGATGCTGTGTGACCCGTTTGTTACTAGACCTCTCTGAGC
CTCTGTTTCCCACCTATAAGTGGGATACTGCTGTGCACCCTGCAGACTTGTGAAAGGAAGTGGA
AAGTGCACACAGTAATACCCGCTGGGGGGACTCTGAGGACACCTCATCCCCTGCCAAGGAGACA
GGAGGGGTCTTGGGATGCAAAGTGCTCCTCTTAAAGCTACAGTCACAGAACCACTAGGGCGTCC
ACTCATTGCTGCTGACTCCGGTTCTGGGCTCCGTGGGGTTCTGTCCTCCTGGGAGGTCAGGAAA
CGCACAAGGCGATGTTTGTGGCCGTGGAGCCTGGAACGTGGGACGGGGATCTGAGTGGCCCAGC
CCGGGAGACTGGAGAAGGCTTGGGGAGGAATCAGGGCCGTGTCCCTCAGCGCGGCCCATGGCTC
CCTGTCCTTCCCAGATCGGTTCCCGAGGGCACAGACATGTTCGAGGTCTACGGGACCCCGGGGG
TGGACGTCTACGTCTCTCCCAGCACGGAGAGGAGCCGGGAGCGGCGCGCTGACCTCAGGCGGTG
GCACTTCGACGAGGGCCTGGAGATCATCGTGGTCATGAACTCCCCCAGCAACGACCTCAACGAC
AGTCACGTGCAGATTTCCTACCACTCCAGCCGTGAGTCTCTGCCCCTGGCCTATGCTGTGCTGT
ACCTCACCTGTGTGGACATCACCCTGGACTGCAACCTGAACTATGAGGGCAGGCAAGAGAAGAG
CTTCGTAGACAAGCGGCAGTGGGTCTGGGGGCCTGGTGGGTATGGAGCTATCTTGCTGGTGAAC
TGTGACAGGGACGATCTGGCCTGTGATGTCCCGGACAACTGTGACCAGTGCGTGCGCTGCCTGC
AAGATCTGGAAGACATGTCTGTCATGGTCCTGCGGACCCAGGGCCCTGCAGCTCTCTTTGACGA
CCACAAACTTATCCTCCACACCTCTAGTTATGATGCCCAGCGGGCACGGGTCTTCCATGTGTGC
GGCCCTGAGGACTCCTGTGAGGCCTACAAGTGCGTGCTGGGCCAGGACAAGGTGTCCTACGAGG
TGCCGCATCTCCATGGGGACGAGGAGCGCTTCTTCGTGGAGGGCCTCTCCTTCCCCGACGCTGG
CTTCCCAGGGCTTATTTCCTTCCATGTCACCCTGCTGGATGACTCCAATGAGGACTTCTCCGAG
ACCCCAATCTTCACTGACTCCGTGGTGTTCCGGGTGGCACCTTGGATCATGACGCCCAGCACCC
TGCCGCCCCTGGAGGTGTACGTGTGCCGGGTGAGGAACAACACGCGTTTTGTGGAAGCTGTGGC
GGAGCTGGCGAGTCAGGCAGGCTGCAAGCTGACCATCTGTCCGCAGACCGAGAACCGCAACGAC
CGCTGGATCCAGGACGAGATGGAGCTAGGCTATGTGGAGGCGCCGCACAAGACCTTCCCTGTGG
TCTTCGATTCCCCCAGGAATGGGGAGCTGCAGGAGTTCCCTTACAAAAGGATCCTGGGGACAGA
TTTTGGCTACGTGACTCGGGAACCACGAGACAAGTCCGTGAGTGGCCTAGACTCCTTTGGGAAC
CTGGAGGTCAGCCCCCCAGTGGTGGCCAACGGGAAGGAGTACCCCCTGGGGCGGATCCTCATCG
GGGGCAACCTGCCTGGGTCAAAGGGCCGCAGGGTCACCCAGGTGGTGCGGAACTTCCTCCACGC
ACAGAAGGTACAGCCGCCTGTAGAGCTCTTCGTGGACTGGCTGGCCGTGGGCCACGTGGATGAG
TTCCTGAGCTTTGTCCCTGCCCCGGATGGGAAGGGCTTCCGGATGCTCCTGGCCAGTCCCGCCG
CCTGCTTCCGGCTCTTCCAGGAGAAGCGGAAATGGGGCCATGGCAGGGCCCTCCTCTTCCAGGG
GGTTGTTGGTGACAGGCAGGTCCGGACCATCTCCATCGACCAGGTCCTTTCCAATAGAAACCTC
ATCAGCTTTAATAAGTTTGTGCAGAGCTGCATCGACTGGAACCGTGAGGTGCTGAAGCGGGAGC
TGGGCCTGGCAGATCAGGACATCATCGACATCCCGCAGCTCTTCAAGTCCGAGCAGAAAAAGGC
GATGGCTTTCTTCCCTGACTTGGTGAATATGCTGGTGCTGGGGAAGTACTTGGGCATCCCCAAG
CCCTTTGGGCCGGTCATCAACGGCCGCTGCTGCCTGGAGGAGAAGAGCTGACCCTGGTGACCAC
CCTGTGCAGGTGGGAAGAGCCTGGAGGACACGGCCCTCAACCTTCTGTTGACATCCTGCCATGC
TGCAGAGCTCGAGACAGCTCTGGAGGGGACAGCTCCGGGAATGAGCCCGCTCTCAGGGCAGAGG
GTGGGCAAGAGCTTGGTTTCCTCAAAGCGGGTATCAGTTTTGTCTGTGCTATGTGTGGGTCCAG
CTGGGTTTCAGTTACTGGCTAATAAATCAACAGAAACACA

hide sequence

RefSeq Acc Id:

XM_013507410 ⟹ XP_013362864

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955527	1,582,065 - 1,600,722 (-)	NCBI

Sequence:

show sequence

GGGACCCCGAGATGAGGGGATGCGCAGGCTGGTTTCTGAGCAGGATCCCTAGCTTACTGGGAAT
GGGGGAGACACAGTTTCAGCATTTTAAGCCTAGCAGCACCATCTGGCTGTTTGACCAGCTCAGG
GCCTGCTTTTCCAGGTGCCCCTGCAGCGGTTCCCAATAGCCTGGGCTCCAAGTCAGAGGCCTGT
GTGTAAACCTATCTCTGCCATTTGATGCTGTGTGACCCGTTTGTTACTAGACCTCTCTGAGCCT
CTGTTTCCCACCTATAAGTGGGATACTGCTGTGCACCCTGCAGACTTGTGAAAGGAAGTGGAAA
GTGCACACAGTAATACCCGCTGGGGGGACTCTGAGGACACCTCATCCCCTGCCAAGGAGACAGG
AGGGGTCTTGGGATGCAAAGTGCTCCTCTTAAAGCTACAGTCACAGAACCACTAGGGCGTCCAC
TCATTGCTGCTGACTCCGGTTCTGGGCTCCGTGGGGTTCTGTCCTCCTGGGAGATCGGTTCCCG
AGGGCACAGACATGTTCGAGGTCTACGGGACCCCGGGGGTGGACGTCTACGTCTCTCCCAGCAC
GGAGAGGAGCCGGGAGCGGCGCGCTGACCTCAGGCGGTGGCACTTCGACGAGGGCCTGGAGATC
ATCGTGGTCATGAACTCCCCCAGCAACGACCTCAACGACAGTCACGTGCAGATTTCCTACCACT
CCAGCCGTGAGTCTCTGCCCCTGGCCTATGCTGTGCTGTACCTCACCTGTGTGGACATCACCCT
GGACTGCAACCTGAACTATGAGGGCAGGCAAGAGAAGAGCTTCGTAGACAAGCGGCAGTGGGTC
TGGGGGCCTGGTGGGTATGGAGCTATCTTGCTGGTGAACTGTGACAGGGACGATCTGGCCTGTG
ATGTCCCGGACAACTGTGACCAGTGCGTGCGCTGCCTGCAAGATCTGGAAGACATGTCTGTCAT
GGTCCTGCGGACCCAGGGCCCTGCAGCTCTCTTTGACGACCACAAACTTATCCTCCACACCTCT
AGTTATGATGCCCAGCGGGCACGGGTCTTCCATGTGTGCGGCCCTGAGGACTCCTGTGAGGCCT
ACAAGTGCGTGCTGGGCCAGGACAAGGTGTCCTACGAGGTGCCGCATCTCCATGGGGACGAGGA
GCGCTTCTTCGTGGAGGGCCTCTCCTTCCCCGACGCTGGCTTCCCAGGGCTTATTTCCTTCCAT
GTCACCCTGCTGGATGACTCCAATGAGGACTTCTCCGAGACCCCAATCTTCACTGACTCCGTGG
TGTTCCGGGTGGCACCTTGGATCATGACGCCCAGCACCCTGCCGCCCCTGGAGGTGTACGTGTG
CCGGGTGAGGAACAACACGCGTTTTGTGGAAGCTGTGGCGGAGCTGGCGAGTCAGGCAGGCTGC
AAGCTGACCATCTGTCCGCAGACCGAGAACCGCAACGACCGCTGGATCCAGGACGAGATGGAGC
TAGGCTATGTGGAGGCGCCGCACAAGACCTTCCCTGTGGTCTTCGATTCCCCCAGGAATGGGGA
GCTGCAGGAGTTCCCTTACAAAAGGATCCTGGGGACAGATTTTGGCTACGTGACTCGGGAACCA
CGAGACAAGTCCGTGAGTGGCCTAGACTCCTTTGGGAACCTGGAGGTCAGCCCCCCAGTGGTGG
CCAACGGGAAGGAGTACCCCCTGGGGCGGATCCTCATCGGGGGCAACCTGCCTGGGTCAAAGGG
CCGCAGGGTCACCCAGGTGGTGCGGAACTTCCTCCACGCACAGAAGGTACAGCCGCCTGTAGAG
CTCTTCGTGGACTGGCTGGCCGTGGGCCACGTGGATGAGTTCCTGAGCTTTGTCCCTGCCCCGG
ATGGGAAGGGCTTCCGGATGCTCCTGGCCAGTCCCGCCGCCTGCTTCCGGCTCTTCCAGGAGAA
GCGGAAATGGGGCCATGGCAGGGCCCTCCTCTTCCAGGGGGTTGTTGGTGACAGGCAGGTCCGG
ACCATCTCCATCGACCAGGTCCTTTCCAATAGAAACCTCATCAGCTTTAATAAGTTTGTGCAGA
GCTGCATCGACTGGAACCGTGAGGTGCTGAAGCGGGAGCTGGGCCTGGCAGATCAGGACATCAT
CGACATCCCGCAGCTCTTCAAGTCCGAGCAGAAAAAGGCGATGGCTTTCTTCCCTGACTTGGTG
AATATGCTGGTGCTGGGGAAGTACTTGGGCATCCCCAAGCCCTTTGGGCCGGTCATCAACGGCC
GCTGCTGCCTGGAGGAGAAGGTGCGCTCGCTGCTGGAGCCGCTGGGCCTCCACTGCACCTTCAT
CGATGACTTCACCCCCTACCACCTGCTGCATGGGGAGGTGCACTGCGGCACTAACGTGCGCCGG
AAGCCCTTTGATTTCAAGTGGTGGAACATGGTGCCCTGAGCCAGCTCCCACCCACTTCCTCCCT
GGGTGGGGCATCGGAGCTGGTCCCTGAACAGTGAGCCTCCAGAGACCCCCGGGTTCCAGACAGA
ATGCTGAGGGTGACTGTCCCCCTCGGAAGCCCCTTCCCTAAGGGTCCATGCCCCACCTGTAACA
CATTTGGCTCCCCTACATGAATACTCTTGGCCTCCCATAGAGGACTTCATTTCTTGTGCCCTCC
TAAGTGGATCAACAGGACCCACACAGACTCCCCTCAGAATCCCCTTTCATAGCGCCCCAAACCT
CCTGTTTGGCACCAAGTTCACTTTGGGGTCTAGAAACATCCATCTCGTTAGCCCCCTTGCCCTG
TGCGTGCTCACGGAGGAAGCCCCACGTGGGAGCAATGCTAGAGTCGCAGCACTCTACGCAGGAC
GGGGCGGAGCTGCGGGTCCATTTCGGGCAAAGTGGGGCCGTCACTCCCACTCTGTGCCCTTCTG
TCCCGCCCGGCCTGAGCCCTCACGTGGCGGATGCCTCTAGGTGGGCGTGGATGGAATGATAGTT
GTATCTTAGCCTTATACACCTCCCACCATTGGACATTCAGAACAATGGCTTTGTCCAAAACGCT
CCTGGAATTTCTTGGAGGCGAGAGTGTCTCAGGATGCTGAAGACTCGGAGGCCTGGGTCCAAGG
ACAAAAAGTGTCTCTTACATCACACAGAGCTGACCCTGGTGACCACCCTGTGCAGGTGGGAAGA
GCCTGGAGGACACGGCCCTCAACCTTCTGTTGACATCCTGCCATGCTGCAGAGCTCGAGACAGC
TCTGGAGGGGACAGCTCCGGGAATGAGCCCGCTCTCAGGGCAGAGGGTGGGCAAGAGCTTGGTT
TCCTCAAAGCGGGTATCAGTTTTGTCTGTGCTATGTGTGGGTCCAGCTGGGTTTCAGTTACTGG
CTAATAAATCAACAGAAACACA

hide sequence

RefSeq Acc Id:

XR_001231973

Type:

NON-CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955527	1,583,153 - 1,600,725 (-)	NCBI

Sequence:

show sequence

GCGGGGACCCCGAGATGAGGGGATGCGCAGGCTGGTTTCTGAGCAGGATCCCTAGCTTACTGGG
AATGGGGGAGACACAGTTTCAGCATTTTAAGCCTAGCAGCACCATCTGGCTGTTTGACCAGCTC
AGGGCCTGCTTTTCCAGGTGCCCCTGCAGCGGTTCCCAATAGCCTGGGCTCCAAGTCAGAGGCC
TGTGTGTAAACCTATCTCTGCCATTTGATGCTGTGTGACCCGTTTGTTACTAGACCTCTCTGAG
CCTCTGTTTCCCACCTATAAGTGGGATACTGCTGTGCACCCTGCAGACTTGTGAAAGGAAGTGG
AAAGTGCACACAGTAATACCCGCTGGGGGGACTCTGAGGACACCTCATCCCCTGCCAAGGAGAC
AGGAGGGGTCTTGGGATGCAAAGTGCTCCTCTTAAAGCTACAGTCACAGAACCACTAGGGCGTC
CACTCATTGCTGCTGACTCCGGTTCTGGGCTCCGTGGGGTTCTGTCCTCCTGGGAGGTCAGGAA
ACGCACAAGGCGATGTTTGTGGCCGTGGAGCCTGGAACGTGGGACGGGGATCTGAGTGGCCCAG
CCCGGGAGACTGGAGAAGGCTTGGGGAGGAATCAGGGCCGTGTCCCTCAGCGCGGCCCATGGCT
CCCTGTCCTTCCCAGATCGGTTCCCGAGGGCACAGACATGTTCGAGGTCTACGGGACCCCGGGG
GTGGACGTCTACGTCTCTCCCAGCACGGAGAGGAGCCGGGAGCGGCGCGCTGACCTCAGGCGGT
GGCACTTCGACGAGGGCCTGGAGATCATCGTGGTCATGAACTCCCCCAGCAACGACCTCAACGA
CAGTCACGTGCAGATTTCCTACCACTCCAGCCGTGAGTCTCTGCCCCTGGCCTATGCTGTGCTG
TACCTCACCTGTGTGGACATCACCCTGGACTGCAACCTGAACTATGAGGGCAGGCAAGAGAAGA
GCTTCGTAGACAAGCGGCAGTGGGTCTGGGGGCCTGGTGGGTATGGAGCTATCTTGCTGGTGAA
CTGTGACAGGGACGATCTGGCCTGTGATGTCCCGGACAACTGTGACCAGTGCGTGCGCTGCCTG
CAAGATCTGGAAGACATGTCTGTCATGGTCCTGCGGACCCAGGGCCCTGCAGCTCTCTTTGACG
ACCACAAACTTATCCTCCACACCTCTAGTTATGATGCCCAGCGGGCACGGGTCTTCCATGTGTG
CGGCCCTGAGGACTCCTGTGAGGCCTACAAGTGCGTGCTGGGCCAGGACAAGGTGTCCTACGAG
GTGCCGCATCTCCATGGGGACGAGGAGCGCTTCTTCGTGGAGGGCCTCTCCTTCCCCGACGCTG
GCTTCCCAGGGCTTATTTCCTTCCATGTCACCCTGCTGGATGACTCCAATGAGGACTTCTCCGA
GACCCCAATCTTCACTGACTCCGTGGTGTTCCGGGTGGCACCTTGGATCATGACGCCCAGCACC
CTGCCGCCCCTGGAGGTGTACGTGTGCCGGGTGAGGAACAACACGCGTTTTGTGGAAGCTGTGG
CGGAGCTGGCGAGTCAGGCAGGCTGCAAGCTGACCATCTGTCCGCAGACCGAGAACCGCAACGA
CCGCTGGATCCAGGACGAGATGGAGCTAGGCTATGTGGAGGCGCCGCACAAGACCTTCCCTGTG
GTCTTCGATTCCCCCAGGAATGGGGAGCTGCAGGAGTTCCCTTACAAAAGGATCCTGGGGACAG
ATTTTGGCTACGTGACTCGGGAACCACGAGACAAGTCCGTGAGTGGCCTAGACTCCTTTGGGAA
CCTGGAGGTCAGCCCCCCAGTGGTGGCCAACGGGAAGGAGTACCCCCTGGGGCGGATCCTCATC
GGGGGCAACCTGCCTGGGTCAAAGGGCCGCAGGGTCACCCAGGTGGTGCGGAACTTCCTCCACG
CACAGAAGGTACAGCCGCCTGTAGAGCTCTTCGTGGACTGGCTGGCCGTGGGCCACGTGGATGA
GTTCCTGAGCTTTGTCCCTGCCCCGGATGGGAAGGGCTTCCGGATGCTCCTGGCCAGTCCCGCC
GCCTGCTTCCGGCTCTTCCAGGAGAAGCGGAAATGGGGCCATGGCAGGGCCCTCCTCTTCCAGG
GGGTTGTTGGTGACAGGCAGGTCCGGACCATCTCCATCGACCAGGTCCTTTCCAATAGAAACCT
CATCAGCTTTAATAAGTTTGTGCAGAGCTGCATCGACTGGAACCGTGAGGTGCTGAAGCGGGAG
CTGGGCCTGGCAGATCAGGACATCATCGACATCCCGCAGCTCTTCAAGTCCGAGCAGAAAAAGG
CGATGGCTTTCTTCCCTGACTTGCTTGACTCCTTTGCTGGCCTCCCCCGGGGACAGATTGAGGA
TGGCCATGCGTTGTAGTTCACGCACAGGAGAGACTGGGACTTTCCTGAAGTCGACGCCAAAGCC
CTAGGACAAGGAGTCTGATTGGTCCATCTTAGGTGAATATGCTGGTGCTGGGGAAGTACTTGGG
CATCCCCAAGCCCTTTGGGCCGGTCATCAACGGCCGCTGCTGCCTGGAGGAGAAGGT

hide sequence

Protein Sequences


Protein RefSeqs	XP_005409873	(Get FASTA)	NCBI Sequence Viewer
	XP_013362862	(Get FASTA)	NCBI Sequence Viewer
	XP_013362863	(Get FASTA)	NCBI Sequence Viewer
	XP_013362864	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000005185
	ENSCLAP00000005185.1
	ENSCLAP00000005186
	ENSCLAP00000005186.1

RefSeq Acc Id:	XP_005409873 ⟸ XM_005409816
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2UYX6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLQRIVRVSLEHPTSAVCVVGVETVVDIYGSVPEGTDMFEVYGTPGVDVYVSPSTERSRERRA DLRRWHFDEGLEIIVVMNSPSNDLNDSHVQISYHSSRESLPLAYAVLYLTCVDITLDCNLNYEG RQEKSFVDKRQWVWGPGGYGAILLVNCDRDDLACDVPDNCDQCVRCLQDLEDMSVMVLRTQGPA ALFDDHKLILHTSSYDAQRARVFHVCGPEDSCEAYKCVLGQDKVSYEVPHLHGDEERFFVEGLS FPDAGFPGLISFHVTLLDDSNEDFSETPIFTDSVVFRVAPWIMTPSTLPPLEVYVCRVRNNTRF VEAVAELASQAGCKLTICPQTENRNDRWIQDEMELGYVEAPHKTFPVVFDSPRNGELQEFPYKR ILGTDFGYVTREPRDKSVSGLDSFGNLEVSPPVVANGKEYPLGRILIGGNLPGSKGRRVTQVVR NFLHAQKVQPPVELFVDWLAVGHVDEFLSFVPAPDGKGFRMLLASPAACFRLFQEKRKWGHGRA LLFQGVVGDRQVRTISIDQVLSNRNLISFNKFVQSCIDWNREVLKRELGLADQDIIDIPQLFKS EQKKAMAFFPDLVNMLVLGKYLGIPKPFGPVINGRCCLEEKVRSLLEPLGLHCTFIDDFTPYHL LHGEVHCGTNVRRKPFDFKWWNMVP hide sequence

RefSeq Acc Id:

XP_013362863 ⟸ XM_013507409

- Peptide Label:

isoform X3

- Sequence:

show sequence

MFVAVEPGTWDGDLSGPARETGEGLGRNQGRVPQRGPWLPVLPRSVPEGTDMFEVYGTPGVDVY
VSPSTERSRERRADLRRWHFDEGLEIIVVMNSPSNDLNDSHVQISYHSSRESLPLAYAVLYLTC
VDITLDCNLNYEGRQEKSFVDKRQWVWGPGGYGAILLVNCDRDDLACDVPDNCDQCVRCLQDLE
DMSVMVLRTQGPAALFDDHKLILHTSSYDAQRARVFHVCGPEDSCEAYKCVLGQDKVSYEVPHL
HGDEERFFVEGLSFPDAGFPGLISFHVTLLDDSNEDFSETPIFTDSVVFRVAPWIMTPSTLPPL
EVYVCRVRNNTRFVEAVAELASQAGCKLTICPQTENRNDRWIQDEMELGYVEAPHKTFPVVFDS
PRNGELQEFPYKRILGTDFGYVTREPRDKSVSGLDSFGNLEVSPPVVANGKEYPLGRILIGGNL
PGSKGRRVTQVVRNFLHAQKVQPPVELFVDWLAVGHVDEFLSFVPAPDGKGFRMLLASPAACFR
LFQEKRKWGHGRALLFQGVVGDRQVRTISIDQVLSNRNLISFNKFVQSCIDWNREVLKRELGLA
DQDIIDIPQLFKSEQKKAMAFFPDLVNMLVLGKYLGIPKPFGPVINGRCCLEEKS

hide sequence

RefSeq Acc Id:	XP_013362862 ⟸ XM_013507408
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2UT81 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFVAVEPGTWDGDLSGPARETGEGLGRNQGRVPQRGPWLPVLPRSVPEGTDMFEVYGTPGVDVY VSPSTERSRERRADLRRWHFDEGLEIIVVMNSPSNDLNDSHVQISYHSSRESLPLAYAVLYLTC VDITLDCNLNYEGRQEKSFVDKRQWVWGPGGYGAILLVNCDRDDLACDVPDNCDQCVRCLQDLE DMSVMVLRTQGPAALFDDHKLILHTSSYDAQRARVFHVCGPEDSCEAYKCVLGQDKVSYEVPHL HGDEERFFVEGLSFPDAGFPGLISFHVTLLDDSNEDFSETPIFTDSVVFRVAPWIMTPSTLPPL EVYVCRVRNNTRFVEAVAELASQAGCKLTICPQTENRNDRWIQDEMELGYVEAPHKTFPVVFDS PRNGELQEFPYKRILGTDFGYVTREPRDKSVSGLDSFGNLEVSPPVVANGKEYPLGRILIGGNL PGSKGRRVTQVVRNFLHAQKVQPPVELFVDWLAVGHVDEFLSFVPAPDGKGFRMLLASPAACFR LFQEKRKWGHGRALLFQGVVGDRQVRTISIDQVLSNRNLISFNKFVQSCIDWNREVLKRELGLA DQDIIDIPQLFKSEQKKAMAFFPDLVNMLVLGKYLGIPKPFGPVINGRCCLEEKVRSLLEPLGL HCTFIDDFTPYHLLHGEVHCGTNVRRKPFDFKWWNMVP hide sequence

RefSeq Acc Id:

XP_013362864 ⟸ XM_013507410

- Peptide Label:

isoform X4

- Sequence:

show sequence

MFEVYGTPGVDVYVSPSTERSRERRADLRRWHFDEGLEIIVVMNSPSNDLNDSHVQISYHSSRE
SLPLAYAVLYLTCVDITLDCNLNYEGRQEKSFVDKRQWVWGPGGYGAILLVNCDRDDLACDVPD
NCDQCVRCLQDLEDMSVMVLRTQGPAALFDDHKLILHTSSYDAQRARVFHVCGPEDSCEAYKCV
LGQDKVSYEVPHLHGDEERFFVEGLSFPDAGFPGLISFHVTLLDDSNEDFSETPIFTDSVVFRV
APWIMTPSTLPPLEVYVCRVRNNTRFVEAVAELASQAGCKLTICPQTENRNDRWIQDEMELGYV
EAPHKTFPVVFDSPRNGELQEFPYKRILGTDFGYVTREPRDKSVSGLDSFGNLEVSPPVVANGK
EYPLGRILIGGNLPGSKGRRVTQVVRNFLHAQKVQPPVELFVDWLAVGHVDEFLSFVPAPDGKG
FRMLLASPAACFRLFQEKRKWGHGRALLFQGVVGDRQVRTISIDQVLSNRNLISFNKFVQSCID
WNREVLKRELGLADQDIIDIPQLFKSEQKKAMAFFPDLVNMLVLGKYLGIPKPFGPVINGRCCL
EEKVRSLLEPLGLHCTFIDDFTPYHLLHGEVHCGTNVRRKPFDFKWWNMVP

hide sequence

RefSeq Acc Id:

ENSCLAP00000005186 ⟸ ENSCLAT00000005281

RefSeq Acc Id:

ENSCLAP00000005185 ⟸ ENSCLAT00000005280

Protein Domains

Protein-arginine deiminase (PAD) central Protein-arginine deiminase (PAD) N-terminal Protein-arginine deiminase C-terminal

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000003678	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000005280	ENTREZGENE
	ENSCLAT00000005280.1	UniProtKB/TrEMBL
	ENSCLAT00000005281	ENTREZGENE
	ENSCLAT00000005281.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.1700	UniProtKB/TrEMBL
	2.60.40.1860	UniProtKB/TrEMBL
InterPro	Cupredoxin	UniProtKB/TrEMBL
	PAD	UniProtKB/TrEMBL
	PAD_C	UniProtKB/TrEMBL
	PAD_central_sf	UniProtKB/TrEMBL
	PAD_N	UniProtKB/TrEMBL
	PAD_N_sf	UniProtKB/TrEMBL
	Prot_Arg_deaminase_cen_dom	UniProtKB/TrEMBL
NCBI Gene	Padi3	ENTREZGENE
PANTHER	PROTEIN-ARGININE DEIMINASE TYPE-3	UniProtKB/TrEMBL
	PTHR10837	UniProtKB/TrEMBL
Pfam	PAD	UniProtKB/TrEMBL
	PAD_M	UniProtKB/TrEMBL
	PAD_N	UniProtKB/TrEMBL
PIRSF	Protein-arginine_deiminase	UniProtKB/TrEMBL
Superfamily-SCOP	Pentein	UniProtKB/TrEMBL
	SSF110083	UniProtKB/TrEMBL
	SSF49503	UniProtKB/TrEMBL
UniProt	A0A8C2UT81	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2UYX6	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-03	Padi3	peptidyl arginine deiminase 3		peptidyl arginine deiminase, type III	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM