Fgfbp1 (fibroblast growth factor binding protein 1) - Rat Genome Database

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Gene: Fgfbp1 (fibroblast growth factor binding protein 1) Chinchilla lanigera
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Symbol: Fgfbp1
Name: fibroblast growth factor binding protein 1
RGD ID: 8799950
Description: ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN cell-cell signaling (ortholog); positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); positive regulation of cell migration involved in sprouting angiogenesis (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: fibroblast growth factor-binding protein 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554808,088,670 - 8,091,882 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554808,088,670 - 8,091,882 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References


Genomics

Comparative Map Data
Fgfbp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554808,088,670 - 8,091,882 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554808,088,670 - 8,091,882 (+)NCBIChiLan1.0ChiLan1.0
FGFBP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl415,935,577 - 15,938,740 (-)EnsemblGRCh38hg38GRCh38
GRCh38415,935,577 - 15,938,740 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37415,937,200 - 15,940,363 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36415,546,290 - 15,549,069 (-)NCBINCBI36hg18NCBI36
Build 34415,613,462 - 15,616,240NCBI
Celera416,401,736 - 16,404,515 (-)NCBI
Cytogenetic Map4p15.32NCBI
HuRef415,286,779 - 15,289,950 (-)NCBIHuRef
CHM1_1415,934,975 - 15,938,146 (-)NCBICHM1_1
Fgfbp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39544,136,200 - 44,139,173 (-)NCBIGRCm39mm39
GRCm39 Ensembl544,136,200 - 44,139,121 (-)Ensembl
GRCm38543,978,858 - 43,981,828 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl543,978,858 - 43,981,779 (-)EnsemblGRCm38mm10GRCm38
MGSCv37544,370,099 - 44,373,001 (-)NCBIGRCm37mm9NCBIm37
MGSCv36544,267,108 - 44,270,010 (-)NCBImm8
Celera541,407,787 - 41,410,689 (-)NCBICelera
Cytogenetic Map5B3NCBI
Fgfbp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21467,103,686 - 67,107,492 (+)NCBI
Rnor_6.0 Ensembl1471,649,274 - 71,650,354 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01471,647,429 - 71,650,359 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01471,677,999 - 71,680,898 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41472,242,271 - 72,243,353 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11472,244,661 - 72,245,742 (+)NCBI
Celera1466,064,463 - 66,065,545 (+)NCBICelera
Cytogenetic Map14q21NCBI
FGFBP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1415,671,157 - 15,674,063 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl415,671,516 - 15,672,220 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0410,374,303 - 10,377,210 (-)NCBIMhudiblu_PPA_v0panPan3
FGFBP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1364,447,441 - 64,450,529 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl364,449,411 - 64,450,178 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha366,965,564 - 66,968,653 (+)NCBI
ROS_Cfam_1.0364,926,048 - 64,929,145 (+)NCBI
UMICH_Zoey_3.1364,415,415 - 64,418,508 (+)NCBI
UNSW_CanFamBas_1.0364,619,531 - 64,622,601 (+)NCBI
UU_Cfam_GSD_1.0364,979,762 - 64,982,848 (+)NCBI
LOC101976958
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528558,328,351 - 58,331,287 (+)NCBI
SpeTri2.0NW_00493647712,030,140 - 12,032,626 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FGFBP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl811,186,368 - 11,189,241 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1811,186,360 - 11,189,317 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2810,836,810 - 10,839,763 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FGFBP1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12734,274,489 - 34,277,672 (+)NCBI
ChlSab1.1 Ensembl2734,276,611 - 34,277,315 (+)Ensembl


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000002491   ⟹   ENSCLAP00000002440
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554808,088,670 - 8,091,882 (+)Ensembl
RefSeq Acc Id: XM_005402520   ⟹   XP_005402577
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554808,088,670 - 8,091,882 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005402577 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAR26541 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005402577   ⟸   XM_005402520
- Sequence:
RefSeq Acc Id: ENSCLAP00000002440   ⟸   ENSCLAT00000002491


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000001767 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000002440 ENTREZGENE
Ensembl Transcript ENSCLAT00000002491 ENTREZGENE
NCBI Gene Fgfbp1 ENTREZGENE