Grk5 (G protein-coupled receptor kinase 5) - Rat Genome Database

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Gene: Grk5 (G protein-coupled receptor kinase 5) Chinchilla lanigera
Analyze
Symbol: Grk5
Name: G protein-coupled receptor kinase 5
RGD ID: 8797552
Description: ENCODES a protein that exhibits beta-adrenergic receptor kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN desensitization of G protein-coupled receptor signaling pathway (ortholog); fat cell differentiation (ortholog); negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; angiotensin II signaling pathway via AT1 receptor; dopamine signaling pathway via D1 family of receptors; ASSOCIATED WITH Alzheimer's disease (ortholog); cardiovascular system disease (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN cytosol (ortholog); nuclear membrane (ortholog); nuclear speck (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495555144,156 - 254,534 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495555143,918 - 255,118 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Grk5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495555144,156 - 254,534 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495555143,918 - 255,118 (+)NCBIChiLan1.0ChiLan1.0
GRK5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810119,207,571 - 119,459,745 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10119,207,571 - 119,459,745 (+)EnsemblGRCh38hg38GRCh38
GRCh3710120,967,083 - 121,219,257 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3610120,957,187 - 121,205,121 (+)NCBINCBI36Build 36hg18NCBI36
Build 3410120,957,186 - 121,205,120NCBI
Celera10114,696,799 - 114,943,133 (+)NCBICelera
Cytogenetic Map10q26.11NCBI
HuRef10114,596,405 - 114,842,644 (+)NCBIHuRef
CHM1_110121,251,583 - 121,499,541 (+)NCBICHM1_1
T2T-CHM13v2.010120,102,994 - 120,355,311 (+)NCBIT2T-CHM13v2.0
Grk5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391960,877,995 - 61,084,406 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1960,878,187 - 61,084,406 (+)EnsemblGRCm39 Ensembl
GRCm381960,889,560 - 61,095,968 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1960,889,749 - 61,095,968 (+)EnsemblGRCm38mm10GRCm38
MGSCv371960,965,652 - 61,168,459 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361960,945,139 - 61,147,005 (+)NCBIMGSCv36mm8
Celera1963,189,741 - 63,294,504 (+)NCBICelera
Cytogenetic Map19D3NCBI
cM Map1956.52NCBI
Grk5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81270,014,314 - 270,208,294 (+)NCBIGRCr8
mRatBN7.21260,028,269 - 260,223,699 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1260,028,242 - 260,218,701 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1268,234,940 - 268,425,947 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01274,940,966 - 275,131,956 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01267,595,271 - 267,786,197 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01282,265,371 - 282,467,842 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1282,265,370 - 282,462,605 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01289,603,922 - 289,802,914 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41267,495,534 - 267,693,144 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11267,706,618 - 267,904,229 (+)NCBI
Celera1255,668,943 - 255,859,242 (+)NCBICelera
Cytogenetic Map1q55NCBI
GRK5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28131,064,338 - 131,314,329 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110131,069,692 - 131,319,683 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v010115,776,236 - 116,026,221 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.110119,200,901 - 119,448,006 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10119,200,688 - 119,450,809 (+)Ensemblpanpan1.1panPan2
GRK5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12829,424,350 - 29,636,552 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2829,424,593 - 29,632,741 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2829,566,413 - 29,778,694 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02829,955,098 - 30,167,121 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2829,955,134 - 30,165,427 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12829,509,598 - 29,721,404 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02829,529,525 - 29,741,448 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02829,723,728 - 29,936,023 (+)NCBIUU_Cfam_GSD_1.0
Grk5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721316,730,225 - 16,924,264 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364868,720,036 - 8,831,075 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364868,720,036 - 8,830,472 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GRK5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14129,113,603 - 129,347,152 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114129,113,933 - 129,351,135 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214140,638,292 - 140,875,396 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GRK5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.19111,996,780 - 112,249,247 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl9111,996,599 - 112,244,570 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604873,269,146 - 73,517,028 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Grk5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473727,375,149 - 27,600,210 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473727,379,114 - 27,600,132 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSCLAT00000002637   ⟹   ENSCLAP00000002584
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495555144,156 - 254,534 (+)Ensembl
RefSeq Acc Id: XM_005412154   ⟹   XP_005412211
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_004955551228,757 - 255,118 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005412155   ⟹   XP_005412212
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495555143,918 - 255,118 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005412211 (Get FASTA)   NCBI Sequence Viewer  
  XP_005412212 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000002584
  ENSCLAP00000002584.1
RefSeq Acc Id: XP_005412212   ⟸   XM_005412155
- Peptide Label: isoform X2
- UniProtKB: A0A8C2UP20 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005412211   ⟸   XM_005412154
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSCLAP00000002584   ⟸   ENSCLAT00000002637
Protein Domains
AGC-kinase C-terminal   Protein kinase   RGS


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000001870 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000002637 ENTREZGENE
  ENSCLAT00000002637.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.167.10 UniProtKB/TrEMBL
  6.10.250.2260 UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro AGC-kinase_C UniProtKB/TrEMBL
  GPCR_kinase UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  RGS UniProtKB/TrEMBL
  RGS_sf UniProtKB/TrEMBL
  RGS_subdomain_2 UniProtKB/TrEMBL
NCBI Gene Grk5 ENTREZGENE
PANTHER G PROTEIN-COUPLED RECEPTOR KINASE 5 UniProtKB/TrEMBL
  G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE UniProtKB/TrEMBL
Pfam Pkinase UniProtKB/TrEMBL
  RGS UniProtKB/TrEMBL
PRINTS GPCRKINASE UniProtKB/TrEMBL
PROSITE AGC_KINASE_CTER UniProtKB/TrEMBL
  PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  RGS UniProtKB/TrEMBL
SMART RGS UniProtKB/TrEMBL
  S_TK_X UniProtKB/TrEMBL
  S_TKc UniProtKB/TrEMBL
Superfamily-SCOP SSF48097 UniProtKB/TrEMBL
  SSF56112 UniProtKB/TrEMBL
UniProt A0A8C2UP20 ENTREZGENE, UniProtKB/TrEMBL