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Gene: Atf6 (activating transcription factor 6) Chinchilla lanigera

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Symbol:

Atf6

Name:

activating transcription factor 6

RGD ID:

8793760

Description:

ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); enzyme binding (ortholog); INVOLVED IN eye development (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of ATF6-mediated unfolded protein response (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH achromatopsia (ortholog); achromatopsia 7 (ortholog); asbestosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

cyclic AMP-dependent transcription factor ATF-6 alpha

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955462	14,357,945 - 14,548,543 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955462	14,352,956 - 14,553,299 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

achromatopsia (ISO)

achromatopsia 7 (ISO)

asbestosis (ISO)

autoimmune interstitial lung, joint, and kidney disease (ISO)

borna disease (ISO)

Charcot-Marie-Tooth disease type 1 (ISO)

color blindness (ISO)

congenital nystagmus (ISO)

Creutzfeldt-Jakob disease (ISO)

Diabetic Cardiomyopathies (ISO)

fundus dystrophy (ISO)

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

Liver Reperfusion Injury (ISO)

macular degeneration (ISO)

parathyroid carcinoma (ISO)

Photophobia (ISO)

retinitis pigmentosa (ISO)

scrapie (ISO)

sensorineural hearing loss (ISO)

steatotic liver disease (ISO)

Temporomandibular Joint Osteoarthritis (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

eye development (ISO)

positive regulation of apoptotic process (ISO)

positive regulation of ATF6-mediated unfolded protein response (ISO)

positive regulation of autophagy (ISO)

positive regulation of transcription by RNA polymerase II (ISO)

response to endoplasmic reticulum stress (ISO)

visual perception (ISO)

Cellular Component

endoplasmic reticulum (ISO)

endoplasmic reticulum membrane (ISO)

Golgi apparatus (ISO)

membrane (ISO)

nucleus (ISO)

RNA polymerase II transcription regulator complex (ISO)

Molecular Function

DNA-binding transcription activator activity, RNA polymerase II-specific (ISO)

DNA-binding transcription factor activity (ISO)

enzyme binding (ISO)

identical protein binding (ISO)

protein binding (ISO)

protein heterodimerization activity (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (ISO)

RNA polymerase II transcription regulatory region sequence-specific DNA binding (ISO)

sequence-specific DNA binding (ISO)

sequence-specific double-stranded DNA binding (ISO)

transcription cis-regulatory region binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

endoplasmic reticulum stress - the unfolded protein response pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Atf6
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955462	14,357,945 - 14,548,543 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955462	14,352,956 - 14,553,299 (-)	NCBI	ChiLan1.0	ChiLan1.0

ATF6
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	161,766,320 - 161,964,070 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	161,766,298 - 161,977,574 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	161,736,110 - 161,933,860 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	160,002,708 - 160,195,476 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	158,467,741 - 158,660,510	NCBI
Celera	1	134,839,502 - 135,032,269 (+)	NCBI		Celera
Cytogenetic Map	1	q23.3	NCBI
HuRef	1	132,980,970 - 133,178,653 (+)	NCBI		HuRef
CHM1_1	1	163,157,827 - 163,355,630 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	161,110,648 - 161,308,347 (+)	NCBI		T2T-CHM13v2.0

Atf6
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	170,532,026 - 170,696,414 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	170,532,243 - 170,695,340 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	170,704,457 - 170,868,585 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	170,704,674 - 170,867,771 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	172,634,588 - 172,797,902 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	172,541,132 - 172,710,564 (-)	NCBI		MGSCv36	mm8
Celera	1	173,146,825 - 173,324,073 (-)	NCBI		Celera
Cytogenetic Map	1	H3	NCBI
cM Map	1	76.96	NCBI

Atf6
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	85,460,312 - 85,639,959 (-)	NCBI		GRCr8
mRatBN7.2	13	82,927,579 - 83,106,381 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	82,930,034 - 83,107,177 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	85,558,613 - 85,732,374 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	86,852,287 - 87,025,840 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	84,083,880 - 84,257,664 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	89,053,457 - 89,242,531 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	89,055,983 - 89,242,443 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	93,668,054 - 93,854,918 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	86,543,773 - 86,718,970 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	86,559,136 - 86,734,174 (-)	NCBI
Celera	13	82,588,612 - 82,760,829 (-)	NCBI		Celera
Cytogenetic Map	13	q24	NCBI

ATF6
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	87,820,564 - 88,020,287 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	87,484,878 - 87,688,569 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	137,178,629 - 137,382,256 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	140,977,750 - 141,181,837 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	140,977,750 - 141,176,725 (+)	Ensembl	panpan1.1		panPan2

ATF6
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	38	20,705,167 - 20,903,852 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	38	20,709,038 - 20,903,814 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	38	20,758,598 - 20,956,710 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	38	20,788,925 - 20,987,730 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	38	20,788,924 - 20,987,623 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	38	20,761,253 - 20,959,710 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	38	21,114,892 - 21,313,427 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	38	21,406,602 - 21,593,774 (-)	NCBI		UU_Cfam_GSD_1.0

Atf6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	7,651,241 - 7,833,831 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004937131	170,649 - 183,942 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ATF6
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	88,591,288 - 88,805,304 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	88,591,279 - 88,806,156 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	96,614,364 - 96,821,004 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ATF6
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	2,112,819 - 2,304,063 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	2,117,982 - 2,304,027 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	1,151,751 - 1,344,350 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Atf6
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624826	190,131 - 412,197 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624826	189,899 - 412,540 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005398327	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01049445	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01049446	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01049447	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01049448	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01049449	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01049450	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDJ01424155	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000017945 ⟹ ENSCLAP00000017770

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955462	14,357,945 - 14,548,543 (-)	Ensembl

RefSeq Acc Id:

XM_005398327 ⟹ XP_005398384

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955462	14,352,956 - 14,553,299 (-)	NCBI

Sequence:

show sequence

ATGTGCTCCAACAGTGGCTCTGCTGGTCATATTACAGTCTTCCAGAAATTGCTGACGTTCTCTC
TGCTGGTTTTCACACATTTTACTTGCGATAGAAACAGTTTGTCTTCGTTCGGCCACCGTCGCGT
CAGCGTTAGGAGTATTTTGTCCGCCTGCGGCTGCCGTCCCAGATACTGTGTTACTTACCGAATT
CCGGGGTACTCGGACTTGTGTTTCGCGGAGCCGGCTGGCGTTACCAGGACCATGGAGTCACCTT
TTAGCCCCGGACTTTGTCACAGACCAGATGAAGACTGGGATTCTACACTCTTCGCTGAACTTGG
TTATTTCACAGACATGGATGAACTACAGTTGGATGCAACAAATGAAACTTACGAAAGTAATTTT
GATCATCTGGACTTTGATTTGGATTTGATGCCTTGGGAGTCAGACATTTGGGGCATAAACAACC
AGTTCTGTACAGTTAAAGATATTAAGGCAGAACCTCAGCCGCTTTCTCCAGCTTCCTCAAGTTG
TTCAGTCTCATCTCCTCAGTCAGTGGACTCCTGTTCTTCAACTCAGCATGTTCCTGAGGAGTTG
GATTTGTCTTCTAGTTCCCAGATGTCTCCTCTTTCCTTGTATGGTGAAAACTGTAATAGTCCAT
CCTCAGCAGAGCCACTCAAGGAAGACAAACCCATTATTGGTCCTAGAAACAAAACTGAAAATGG
AATGACTCCAAAGAAAAAAATTCTGATAAGTTCAAAACCTTCAATTCAGCCCAAGCCTTTATTA
CTTCCAGCAGCACCCAAGGCTCAAACAAACTCCAGTGTTCCAGCAAAAACCATCATCATTCAGA
CATTACCGACACTTATGCCATTGGCAAAGCAGCATCCAGTTATCAGTATACAACCTACACCCAC
TAAAGGTCAGACCATTTTGCTCTCTCAGCCTACTGTGGTACAACTTCAGACTCCTGGAGTTCTG
CCCTCTGCTCAGCCTGTCCTTGCTGTCTCTGGGGGAGCCACACAGCTACCTAATCATGTGGTGA
ATGTGGTGCCAGCCCCTGTGGTGAGCAGCCCGGTGAACGGAAAACTTTCTGTGACTAAACCTGT
CCTACAAAGTACCACGAGAAGTGTGGGCTCAGATATCGCTGTGCTAAGAAGACAACAACGTATG
ATAAAAAATCGAGAGTCTGCTTGTCAGTCGCGCAAGAAAAAGAAAGAATATATGCTAGGGCTGG
AGGCAAGATTAAAGGCAGCTCTTTCGGAGAACGAGCAACTGAAGAAAGAGAATGGATCCCTGAA
GCGGCAGCTGGACGAAGTTGTATCAGAGAACCAGAGGCTTAAAGTTCCCAGTCCAAAGCGAAGA
GCGGTCTGTGTGATGATAGTCTTGGCATTTATAATCCTGAACTATGGACCTATGAGCATGTTGG
AACAGGATCCCAGGAGAATGAACCCTAATGTGCACCCTGCAAATCAAAGGAGGCATCTTTTAGA
ATTTTCTGCTAAAGAAGAACAACGCACATCAGATGACATCATCCAGAAAAATAGTTATAGATAT
GATCATTCTGTGTCAAATGACAAAGCCCTAATGGTACTAACAGAAGAGCCACTACTTTATATTC
CTCCACCTCCTTGTCAACCCCTGATTAACACAACCGAGTCACTCAGGTTAAATCATGAACTTCG
AGGTTGGGTTCACAGACACGAAGTAGAAAGGACCAAGTCAAGAAGAATGACAAACAATCAGCAG
AAGACCCGTATTCTTCAGGGTGCTCTGGAACAGAGCTCAAATTCTCAGCTGATGGCTGTTCAAT
ACACAGAAACCACTAGTATCAGTAGGAACTCGGGGAATGAGTTACAAGTATATTATGCTCCACC
CGGAAGTTATCAAGACTTCTTTGAAGCTATTCGCAGAAGAGGGGACACATTTTATGTTGTGTCA
TTTCGAAGGGATCACCTGCTGTTACCAGCTACTACCCATAACAAGACCACAAGACCAAAAATGT
CAATTGTGTTACCAGCAATTAACATAAATGAAAACGTGATCAATGGGCAGGACTACGAAGTGAT
GATGCAGATTGACTGCCAGGTGATGGACACTCGGATCCTCCACATCAAAAGCTCCTCAGTTCCT
CCTTACCTCCGAGATCAGCAGAGGAATCAAACCAACACCTTCTTTGGTTCCCCTCCATCAGCCA
CAGAGGCAGCCCATGTTGTCAGCACCATCCCCAAGTCGTTACAGTAATGCTCTGCAGCGAGGTG
GGAAAACAGAATGGGACCTGTTGGACTGCAGAGTGGGCGAGAGAAACGCCGCTTTCTGTCTGCA
GAGAACTGCTTCAGACTCCAGTTCAGGGAGGAGAGAAGGAAGAAGAAGCTAGTCTTCCAAACTG
CCAGAATTTAGATGCAAGAGAACATTTCTCCAGGGGCAAATGTAGCATACATCCTCCAGTGTTA
CCTGGTGTAGATTCGCCCACACCTTTCTAAGCTGCTTTTCATTCTGTATTTGTGTTCTCTTGCT
TTCAAGTAAGATCTGCTTCCCCTTCCTCCCATTTCACTTGTTGATAAAGAAGTTTTTATTTAAA
GCTATAGCCCTCAGAAACACAGATGGTTTCCCACAGATTGGTTTTCTCATTCCTTTACTGCAAA
CCTATTCTGGATATTGTGCTTGAGAAAATAAATTTGAAAACCAGAACAGCCAAAAACATCCCAC
AAAGAGTCAAAACTGTTTGGAGCTTTGGGTAAAAAGGAATATCCCCGGTTGGTAAAGTTTACTT
ATACTTGGGACTTGTGGTTCGTATGTAAACAAGTAACTGTTGGGCATCTGAGGGTGGGCCACAA
ATCTGAGAGAACTGAAAGGAAGAGGAAGCTCAGCGGTGGGCCTTGGAAGAGGAGGTAGCTCCAT
TAATACCTGTGTTTAAAATGTTGAAAGTCTGATGCTATTGCAGTGTAGAGTGAAAGCCATAGCT
ACCGTTCATTGTCGGGATTCTAGGCTGCTGAGTGGTGGTGTGCAGACTGGTGTCATCTCTTGAC
TGATCTGGTACAGATACTCAAGGGCCATGGGGCAAATCCTTTGTTTTCATTACGAATCCTCCAT
GGTACCAGATTTAGGCAAGGAACATGGAGGTGGCTTTAGACTTAAGCACGGCAAGAGCTTTTTC
CCTTGAGTACTGACAGGTACTTTTTCCTTAAGATGATGCAGACGGGTACCTTAGATTCCTGCTG
AGGAAGTGCCTCCTGTAATACGGCAATCATTTTCAATTTCTCCATGAAAAGACAATGGAAGAAT
GAACTCTTTTGTTGTTCAAAGAAGAGCTGCGTCCACTTACATTTTACTGAACCTTGCCTACTTT
CTTCGGCATAGTAGACAGTTAACTTATGCCTCACTTGGTGACTTCACCACATGCATCTCAGGCA
ACAATGTCCTCGCTAATGCTCTGCCCTCAGTTTCTAAAGTGAGCCCTTCTGCCTCTCCATTCTG
ACACTTTCCAGTCTCAAAGGCTGCTTTTCACCCCAATTTACTTGCCTCTGTCAGATTTCTTCCT
TCCCCATTCCATACTGTATCAGTTAATTCCTCTTCCTCCTTGCAAGAAAAGGAAAGAAAAATTA
TGTCAACCCCTGAAGGACTGCATGCAGTCAGTTCATTTTCTGCCTGTGCACTAATCAAGCCTGG
CCTCTAAATAATAGTAAACCACCACCACCATTTCTAATTCTCTGGACAGTAATGCCTCTCAAGC
TAGCCTGTTACTTTCCAAGAAAATCATTTTAACTTGGGGGTGGAGGGCTATTGCTTTATTACCT
GGTAACCTGGAGTTTGAATTAACCTTCCTTTTTCCCCACACCACAGACTCTTAAGCCAGTGCAG
CACTCTCCCCTCTGATCTGGCTCCTGTGTGACTTTCAGACGTGAACTATTTTCTCTGGCGACTG
TTCTTTTAATGGGTGCCAAAGAATAGACAACAGATGCCTAAAAGACTGTTAAGTTACTAGGCAG
TCTTTTAGTGCGATGTCCTATGGCCCTGCTTCTCCTTGTTCTGTAATATGAATTAGCCCAACAA
GAGGCTGTGACTATGGCTAGCAGGTGGTGATACCACGGTCATTTCCAAGCTGCTAATCTGCTGG
AACTGCCACACGTTATGGTAGGTACAAACGCAGGATGTCCAGAGTGGCTGTCAGTGGAGCCTCT
GCTCTCTTTTGCACTGAATCACACAAGAAGAAACCACCACATGGTGTTCTTGTCTCTAGCACTT
TGCTTTTCCTGTGCTCGTTCTGCCAACTGCTCAGACAGAAGACTTCAGTTATGTCATGTTCACC
AGCATTACTGCCTCTGTGATGGGTGAACATGTGCGTGACGGTTGGGAGGCCCAGACAGGTGTCC
GGATGGTCAGCACCCCAGCCGTGGAGCTGAGTACCTGGGCAGTGACTGATGCTCGGAAGCAGCA
GGGAGCTTTGCCTTTCTCATTCACTGACCCCACAGCTCCTTGCTGTTCTTCAGTTGATCTTTTT
GGGGATGAGGAACAGGAGCCTCCTCAGGGTAGAATTTCAGGAAACATGGCAACTGACAAGTTGC
AGAAAAGAACTCTGCCTTCCAAATTGCTGGCACAGTTATTACTTCCTAGAAACAAAAGTAGTTG
TTACTGTAGCGTTTGTATGCCAGCTCAAGGGCCTTTAGGAAATGGAGAGCTGCTATGACAGGTT
AGTAAGTTAAGCGAGTGTTTGAGCTTCACTTTTTGGTGGGGTTGCCTTTGGGGGAGATATGTGT
ATACATATATATATATATTTTTTTTAAATTTATTTAAGTTTTAAAGTGAGATTTTTGCAAACCC
ATGAGAAAATTAGATAAACTCTTAAGGGAGGGAAGTCCACCTGATAGTAGATGATTTCATGTCC
TTTGGCCAACACTGCTGCACTTGGGAAGAGGTGGAGACTGACAGGAGCAGTCATTCCACCTGTT
TGCAAGTCCCAGATTGTTAGGCCTCATGTAAGTAAGTGGATGTTTCCTCCTGCTAACCTCTGAG
TCAGGTGTCAGGAGCGTATCTGTGGGATGAACTCATACCAGTAGCGCAGGGACACAGCCTCGTT
AGAATGCCAGTATTCTCAAGTCAAGAGTTAACGGGAGCGGATCACTCTTGAGGTAAATATATTG
TTTGCAGTGCTTGTAGTGTAGCAATTTTACATTGCATGGTTGGGTGCGGTTTACTTTTTCAGAA
ATAAAAAGTCTTCCATGGTTATAAAAACTCAGAACAGCTTCTAATTTCTTTTACATGACTAAAA
TTTCCAGGACAAAGCTGGCATCTCTCTGTCTTATTAGCAACAAATAGAAATTGGAGGTATTTGA
AAGCAGTTATGTTAGATGAGTCATTCTTAAATGTTCCCAATAAACATTACTTAGAAACACAGGG
GAGCTGGGACCCACGCTGATTTTTCTATCATGTTTAAAGAAACACTACCCTGATTAAATTTTGT
TGGGCTGACTCCCCCGGGGCATATATTCCTCAGTAGTCACCACAGCCCAGCAAGACACAATCAG
ACACTGCCGCCGTGGCATTTGGAGAACTCTTGAGTTCTTCACAGCCTTCAGACTACTGTTTGAT
TCTTGCCATTTTACTAAACTCAGGTTGTGAAACTTGACAGAAATGTACCACAGGAAAAGACTTG
TGTTAGAGAGTCAAATACAGTTACATCGAAAAGTTTCAGAGCAATTTCTACTTTCAGTGACATG
TTAGAAATAACCACTTTTACTTTCATAACCTGAAGTACCAGAGTCTGGTCCGATGCCCCCTTGC
AGCCTGACCTCATGGAAAGTTTTTACCCTTGAAGCCTTCTTTCCACCGCATACTGATGGGCTGA
CTCAGCCACCTTCCGCAGACCCACATTAACTGCATACTGGCAGCGGTGTCAAATAAGCCTGCTT
ATTGCCAGACTTGATGAGAGCTTATTACCACCTCTGGACCCCATATTCACTACCAAAACCTTGT
TTTCATCAGTGCTGAGTCATTTTTATTTACATAAATCAGGATCTTTCCTGCTAATATGAATCCA
GTTATAACTTTTACCATAAAATAAGAAAACATAAAAGAAAGAGAATGAAATACAAGAATTTTTC
ATTCCTACCCTCACAATATTTGGAAGGGGAAATTCCTGTTTTCCCCTTACCTGCAGGGATTGTG
GCCAATATTTAAGGAAACAGAAACTGGACCAAAAGTTGTTACCAGAGTCCAGCAAAAACTGTGC
ACAGGGGCTGGGGATTTAGCTCAGTGGCAAAGCGCCTGCCTGGCAAGCGCAAGGTCGTGAGTTC
GGTTCCCGGTACCGGAGAAAAACCAAAAAAAAAAAACTGTGCACAAAAGAGAAATGCAACTTCC
TACCTGAAAAACCAAGAAAATGTTGTGCTAACTTATATTTTTAATGACTAATCTTAAAGTTTAT
TTTGGATAGAACTAGAACTTTCCACAGTTTATTCTAATATCTGTGTTTTCTGTCATGTGCAATA
GAACTTATGGGGAAAATGATAAAAGTGTATGGTTAGAAGATTTGATCTTACATGTGAATCATAT
CATGGCTAGCCAGGGCACACAGTAGACAGAATTCTCAAATAAGCGTTGGGGATTTAGCGCATTA
AAAGACTTAATTGTATGAGCCTTGAGAACTAAGGATAAATACAGTTTTTTATTTGTTGAGGCTA
ATAAACACCACTGTTTGGCGTTTGTCCCCAAAGAAGTTAGTGACCATTAGTTAAATAAATTAGG
AGGCTTGGTGTATTCCCTGGTGTGAAATACCAGAACAAAATTAGCAGGTTAGCTTTCACAGCAC
ATGTTTACTGGCTGAAATATTTTCATTCATATTGAGCCCTCATTTCTGGGTCAGTCACTAGGAT
GGAGGAGATGATTGGGAAGTAGTGCTTTCATGGAAAACTGTAAAGTGATACCAGTTTCTTTTGC
CCATCATGTTGGCAAGTATTGTTGGACTAAGAACAGTAGTGCTACACCTCTGCAGCCTCCGAAA
CCTCAGGAGAGTACCAGAAATGCCATTTCACCAGGGCTTTCTTCCTTAGGTTGTATCCATGCTA
ATTTAATAATGTGCGCAGGATGAAGAAGACAGAGGTATCATTCTGTCCTTTAATAATTACATCA
GTTTACAATACATAAATAATGACAATAAACTTTCGTATTTTCAAGTAACTCTTTATAATGTAAT
ACCTGTTCTTTCTCTAAAATTTAAATAAAGACTTTTTAAACTTG

hide sequence

Protein Sequences


Protein RefSeqs	XP_005398384	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000017770
	ENSCLAP00000017770.1

RefSeq Acc Id:

XP_005398384 ⟸ XM_005398327

- UniProtKB:

A0A8C2VU98 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MCSNSGSAGHITVFQKLLTFSLLVFTHFTCDRNSLSSFGHRRVSVRSILSACGCRPRYCVTYRI
PGYSDLCFAEPAGVTRTMESPFSPGLCHRPDEDWDSTLFAELGYFTDMDELQLDATNETYESNF
DHLDFDLDLMPWESDIWGINNQFCTVKDIKAEPQPLSPASSSCSVSSPQSVDSCSSTQHVPEEL
DLSSSSQMSPLSLYGENCNSPSSAEPLKEDKPIIGPRNKTENGMTPKKKILISSKPSIQPKPLL
LPAAPKAQTNSSVPAKTIIIQTLPTLMPLAKQHPVISIQPTPTKGQTILLSQPTVVQLQTPGVL
PSAQPVLAVSGGATQLPNHVVNVVPAPVVSSPVNGKLSVTKPVLQSTTRSVGSDIAVLRRQQRM
IKNRESACQSRKKKKEYMLGLEARLKAALSENEQLKKENGSLKRQLDEVVSENQRLKVPSPKRR
AVCVMIVLAFIILNYGPMSMLEQDPRRMNPNVHPANQRRHLLEFSAKEEQRTSDDIIQKNSYRY
DHSVSNDKALMVLTEEPLLYIPPPPCQPLINTTESLRLNHELRGWVHRHEVERTKSRRMTNNQQ
KTRILQGALEQSSNSQLMAVQYTETTSISRNSGNELQVYYAPPGSYQDFFEAIRRRGDTFYVVS
FRRDHLLLPATTHNKTTRPKMSIVLPAININENVINGQDYEVMMQIDCQVMDTRILHIKSSSVP
PYLRDQQRNQTNTFFGSPPSATEAAHVVSTIPKSLQ

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Ensembl Acc Id:

ENSCLAP00000017770 ⟸ ENSCLAT00000017945

Protein Domains

bZIP

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000012192	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000017945	ENTREZGENE
	ENSCLAT00000017945.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.170	UniProtKB/TrEMBL
InterPro	ATF_bZIP_TF	UniProtKB/TrEMBL
	bZIP	UniProtKB/TrEMBL
	bZIP_sf	UniProtKB/TrEMBL
NCBI Gene	Atf6	ENTREZGENE
PANTHER	ATF6, ISOFORM C	UniProtKB/TrEMBL
	PTHR46164:SF1	UniProtKB/TrEMBL
Pfam	bZIP_1	UniProtKB/TrEMBL
PROSITE	BZIP	UniProtKB/TrEMBL
	BZIP_BASIC	UniProtKB/TrEMBL
SMART	BRLZ	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57959	UniProtKB/TrEMBL
UniProt	A0A8C2VU98	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

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