Gene: LOC102005030 (olfactory receptor 226) Chinchilla lanigera |
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Analyze |
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Symbol: |
LOC102005030 (Ensembl: OR6A2) |
Name: |
olfactory receptor 226 |
RGD ID: |
8791005 |
Description: |
ASSOCIATED WITH genetic disease (ortholog) |
Type: |
protein-coding
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RefSeq Status: |
MODEL |
RGD Orthologs |
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Alliance Genes |
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More Info |
more info ...
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More Info |
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Latest Assembly: |
ChiLan1.0 - Chinchilla ChiLan1.0 Assembly |
Position: |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955414 | 22,706,291 - 22,707,274 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955414 | 22,706,291 - 22,707,274 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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Imported Disease Annotations - ClinVar
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References
Additional References at PubMed
Genomics
Comparative Map Data
LOC102005030 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955414 | 22,706,291 - 22,707,274 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955414 | 22,706,291 - 22,707,274 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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OR6A2 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 11 | 6,791,736 - 6,799,689 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 6,791,736 - 6,799,689 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 6,812,967 - 6,820,920 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 6,772,332 - 6,773,715 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 11 | 6,934,849 - 6,936,232 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | p15.4 | NCBI | | | | | HuRef | 11 | 6,474,715 - 6,476,098 (-) | NCBI | | HuRef | | | CHM1_1 | 11 | 6,814,666 - 6,816,049 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 6,850,158 - 6,858,111 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Or6a2 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 7 | 106,600,082 - 106,601,812 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 7 | 106,594,606 - 106,605,279 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 7 | 107,000,875 - 107,002,605 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 7 | 106,995,399 - 107,006,072 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 7 | 114,144,389 - 114,146,119 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 7 | 106,794,524 - 106,795,507 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 7 | 107,026,760 - 107,028,491 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | E3 | NCBI | | | | | cM Map | 7 | 56.1 | NCBI | | | | |
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Or6a2 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 1 | 170,239,077 - 170,240,060 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 160,827,258 - 160,828,241 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 160,793,997 - 160,831,557 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 169,081,390 - 169,082,373 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 176,267,393 - 176,268,376 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 168,949,932 - 168,950,915 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 148,846,679 - 148,847,662 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 148,846,679 - 148,847,662 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 171,059,028 - 171,060,011 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 155,149,851 - 155,150,834 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 164,256,455 - 164,257,438 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 164,351,931 - 164,352,915 (-) | NCBI | | | | | Celera | 1 | 158,741,544 - 158,742,527 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | q33 | NCBI | | | | |
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LOC100974335 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 9 | 9,234,603 - 9,332,485 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 9,193,057 - 9,362,922 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 6,924,625 - 6,930,405 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 6,612,202 - 6,613,379 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 6,612,202 - 6,613,185 (-) | Ensembl | panpan1.1 | | panPan2 | |
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OR6A2 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 21 | 30,254,194 - 30,255,177 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 21 | 30,254,194 - 30,255,177 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 21 | 29,925,295 - 29,926,278 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 21 | 31,073,199 - 31,074,182 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 21 | 31,073,199 - 31,074,182 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 21 | 30,387,427 - 30,388,410 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 21 | 30,548,327 - 30,549,310 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 21 | 30,750,181 - 30,751,164 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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LOC101975950 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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LOC100738942 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 9 | 2,702,533 - 2,703,516 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 9 | 2,700,569 - 2,705,447 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 9 | 3,513,421 - 3,514,618 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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LOC103241237 (Chlorocebus sabaeus - green monkey) |
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LOC101698941 (Heterocephalus glaber - naked mole-rat) |
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Expression
Sequence
RefSeq Acc Id: |
ENSCLAT00000026254 ⟹ ENSCLAP00000025948 |
Type: |
CODING |
Position: |
Chinchilla Assembly | Chr | Position (strand) | Source |
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ChiLan1.0 Ensembl | NW_004955414 | 22,706,291 - 22,707,274 (-) | Ensembl |
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RefSeq Acc Id: |
XM_005380180 ⟹ XP_005380237 |
Type: |
CODING |
Position: |
Chinchilla Assembly | Chr | Position (strand) | Source |
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ChiLan1.0 | NW_004955414 | 22,706,291 - 22,707,274 (-) | NCBI |
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Sequence: |
ATGGAGCGGAGGAACCACAGTGGCAGAGTGAGTGAGTTTGTGTTGCTGGGGTTTCCAGCTCCTA TGCCACTGCGGGCACTACTGTTTTCCCTCTCTCTGCTGGCCTATGTATTGGTGCTGACTGAAAA TGGACTCATCATTATGGCAATCAGGAACCACCCCGCCCTCCACAAACCCATGTATTTCTTTCTG GCTAATATGTCCTTCTTGGAGATCTGGTATGTCACTGTCACTATTCCCAAAATGCTTGCTGGCT TCATTGCATCCAAAAAGAATCATGGACAGCTAATCTCCTTTGAGGGCTGCATGACACAGCTCTA CTTTTTCTTGGGCTTGGGCTGCACTGAGTGTGTTCTTCTTGCTGTTATGGCCTACGATCGTTAT GTGGCCATCTGTCACCCTCTCCACTACCCTGTCATTGTCAGTGGTCGGCTGTGTGTGCAGCTGG CAGCTGGCTCCTGGGCTGGAGGCTTTGGAATCTCCATGGTTAAAGTTTTTCTCATTTCTCGCCT CTCTTACTGTGGCCCCAACATCATCAACCACTTTTTCTGTGATGTCTCCCCATTGCTCAACCTC TCGTGCACTGACATGTCCATAGCAGAGCTCACTGACTTCATCCTGGCCATTTTTATCCTGCTGG GGCCCCTCTCTGTCACTGGGGCTTCCTACATGGCCATTACTGGTGCTGTCACGCGCATCCCTTC AGCTGCTGGACGCCACAAAGCTTTTTCTACCTGTGCCTCTCACCTCACTGTTGTGGTCATCTTC TACGCAGCCAGTATCTTTATCTATGCCCGGCCTAAGGCACTGTCAGCTTTTGACACCAACAAGC TGGTCTCTGTACTCTATGCTGTCATCGTACCATTGCTCAATCCCATTATTTACTGCTTGCGTAA CCAAGAGGTCAAAAGAGCCCTACGCCGTACTCTGCACCTTTACCAGGGCCAGGATGCTAACTTC AATAAATCAGATAGAGACAGGTAG
hide sequence
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RefSeq Acc Id: |
XP_005380237 ⟸ XM_005380180 |
- UniProtKB: |
A0A8C2W6R6 (UniProtKB/TrEMBL) |
- Sequence: |
MERRNHSGRVSEFVLLGFPAPMPLRALLFSLSLLAYVLVLTENGLIIMAIRNHPALHKPMYFFL ANMSFLEIWYVTVTIPKMLAGFIASKKNHGQLISFEGCMTQLYFFLGLGCTECVLLAVMAYDRY VAICHPLHYPVIVSGRLCVQLAAGSWAGGFGISMVKVFLISRLSYCGPNIINHFFCDVSPLLNL SCTDMSIAELTDFILAIFILLGPLSVTGASYMAITGAVTRIPSAAGRHKAFSTCASHLTVVVIF YAASIFIYARPKALSAFDTNKLVSVLYAVIVPLLNPIIYCLRNQEVKRALRRTLHLYQGQDANF NKSDRDR
hide sequence
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RefSeq Acc Id: |
ENSCLAP00000025948 ⟸ ENSCLAT00000026254 |
Additional Information
Nomenclature History
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2015-08-25 |
LOC102005030 |
olfactory receptor 226 |
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olfactory receptor 226-like |
Symbol and/or name change |
5135510 |
APPROVED |
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