Kank1 (KN motif and ankyrin repeat domains 1) - Rat Genome Database

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Gene: Kank1 (KN motif and ankyrin repeat domains 1) Chinchilla lanigera
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Symbol: Kank1
Name: KN motif and ankyrin repeat domains 1
RGD ID: 8790556
Description: ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell population proliferation (ortholog); glomerular visceral epithelial cell migration (ortholog); ASSOCIATED WITH cholestasis (ortholog); Experimental Liver Cirrhosis (ortholog); Malformations of Cortical Development, Group II (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: KN motif and ankyrin repeat domain-containing protein 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554345,191,846 - 5,279,739 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554345,247,278 - 5,279,043 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References


Genomics

Comparative Map Data
Kank1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554345,191,846 - 5,279,739 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554345,247,278 - 5,279,043 (+)NCBIChiLan1.0ChiLan1.0
KANK1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl9470,291 - 746,106 (+)EnsemblGRCh38hg38GRCh38
GRCh389470,295 - 746,104 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh379470,295 - 746,103 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369494,703 - 736,103 (+)NCBINCBI36hg18NCBI36
Celera9421,697 - 662,617 (+)NCBI
Cytogenetic Map9p24.3NCBI
HuRef9422,063 - 697,776 (+)NCBIHuRef
CHM1_19469,730 - 745,633 (+)NCBICHM1_1
Kank1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391925,214,091 - 25,411,862 (+)NCBIGRCm39mm39
GRCm39 Ensembl1925,214,339 - 25,411,860 (+)Ensembl
GRCm381925,236,732 - 25,434,498 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1925,236,975 - 25,434,496 (+)EnsemblGRCm38mm10GRCm38
MGSCv371925,311,692 - 25,508,986 (+)NCBIGRCm37mm9NCBIm37
MGSCv361925,304,299 - 25,501,593 (+)NCBImm8
Celera1926,023,481 - 26,224,832 (+)NCBICelera
Cytogenetic Map19BNCBI
Kank1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21222,877,962 - 223,074,514 (+)NCBI
Rnor_6.0 Ensembl1243,276,403 - 243,398,536 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01243,201,073 - 243,398,531 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01250,464,788 - 250,659,569 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41228,748,121 - 228,868,261 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11228,953,941 - 229,032,270 (+)NCBI
Celera1220,157,106 - 220,275,618 (+)NCBICelera
Cytogenetic Map1q51NCBI
KANK1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Mhudiblu_PPA_v09550,713 - 556,230 (+)NCBIMhudiblu_PPA_v0panPan3
KANK1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1189,446,340 - 89,618,716 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl189,480,399 - 89,618,143 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha189,881,037 - 90,088,470 (+)NCBI
ROS_Cfam_1.0189,960,930 - 90,168,925 (+)NCBI
UMICH_Zoey_3.1189,606,742 - 89,814,600 (+)NCBI
UNSW_CanFamBas_1.0189,319,249 - 89,527,336 (+)NCBI
UU_Cfam_GSD_1.0190,086,221 - 90,294,502 (+)NCBI
Kank1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947136,917,110 - 137,047,718 (+)NCBI
SpeTri2.0NW_0049365034,125,302 - 4,255,880 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KANK1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1221,015,046 - 221,218,575 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11221,015,042 - 221,218,875 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21247,300,636 - 247,477,277 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KANK1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11278,775,214 - 79,015,538 (-)NCBI
ChlSab1.1 Ensembl1278,774,788 - 78,973,851 (-)Ensembl
Vero_WHO_p1.0NW_02366603867,163,360 - 67,410,180 (-)NCBI
Kank1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247365,260,761 - 5,444,234 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000022828   ⟹   ENSCLAP00000022620
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554345,191,846 - 5,279,739 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000022829   ⟹   ENSCLAP00000022621
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554345,247,281 - 5,265,483 (+)Ensembl
RefSeq Acc Id: XM_005388591   ⟹   XP_005388648
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554345,247,278 - 5,279,043 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005388596   ⟹   XP_005388653
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554345,247,278 - 5,279,043 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005388648 (Get FASTA)   NCBI Sequence Viewer  
  XP_005388653 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005388648   ⟸   XM_005388591
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005388653   ⟸   XM_005388596
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSCLAP00000022621   ⟸   ENSCLAT00000022829
RefSeq Acc Id: ENSCLAP00000022620   ⟸   ENSCLAT00000022828


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000015509 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000022620 ENTREZGENE
Ensembl Transcript ENSCLAT00000022828 ENTREZGENE
NCBI Gene Kank1 ENTREZGENE