Cep295 (centrosomal protein 295) - Rat Genome Database

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Gene: Cep295 (centrosomal protein 295) Chinchilla lanigera
Analyze
Symbol: Cep295
Name: centrosomal protein 295
RGD ID: 8788014
Description: ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN centriole replication (ortholog); positive regulation of centriole elongation (ortholog); positive regulation of centrosome duplication (ortholog); ASSOCIATED WITH intellectual disability (ortholog); Meckel syndrome (ortholog); Seckel syndrome 11 (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: centrosomal protein 295kDa; centrosomal protein of 295 kDa; Kiaa1731
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955414807,276 - 860,316 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955414806,238 - 860,273 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Cep295
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955414807,276 - 860,316 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955414806,238 - 860,273 (-)NCBIChiLan1.0ChiLan1.0
CEP295
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381193,661,682 - 93,730,358 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1193,661,682 - 93,730,358 (+)EnsemblGRCh38hg38GRCh38
GRCh371193,394,848 - 93,463,524 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361193,394,816 - 93,463,522 (+)NCBINCBI36Build 36hg18NCBI36
Celera1190,686,257 - 90,754,974 (+)NCBICelera
Cytogenetic Map11q21NCBI
HuRef1189,472,269 - 89,540,753 (+)NCBIHuRef
CHM1_11193,277,852 - 93,346,533 (+)NCBICHM1_1
T2T-CHM13v2.01193,578,052 - 93,648,871 (+)NCBIT2T-CHM13v2.0
Cep295
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39915,228,210 - 15,269,145 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl915,228,211 - 15,269,084 (-)EnsemblGRCm39 Ensembl
GRCm38915,316,914 - 15,357,849 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl915,316,915 - 15,357,788 (-)EnsemblGRCm38mm10GRCm38
MGSCv37915,121,358 - 15,162,232 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36915,067,308 - 15,083,892 (-)NCBIMGSCv36mm8
Celera912,595,903 - 12,636,777 (-)NCBICelera
Cytogenetic Map9A2NCBI
cM Map94.79NCBI
Cep295
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8820,437,967 - 20,475,968 (-)NCBIGRCr8
mRatBN7.2812,156,568 - 12,194,542 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl812,156,554 - 12,194,552 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx816,138,298 - 16,176,106 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0814,436,048 - 14,473,858 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0812,419,524 - 12,457,404 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0813,871,065 - 13,909,249 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl813,871,213 - 13,909,188 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0813,810,841 - 13,848,730 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4812,119,277 - 12,148,950 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1812,117,148 - 12,148,935 (-)NCBI
Celera813,624,275 - 13,662,157 (-)NCBICelera
Cytogenetic Map8q12NCBI
CEP295
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2994,520,645 - 94,590,117 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11195,614,553 - 95,684,035 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01188,683,180 - 88,751,995 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11192,170,720 - 92,239,237 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1192,175,806 - 92,239,772 (+)Ensemblpanpan1.1panPan2
CEP295
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1217,023,466 - 7,076,306 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl217,023,491 - 7,061,567 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha217,038,435 - 7,091,265 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0217,203,696 - 7,256,530 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl217,203,706 - 7,256,487 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1216,989,860 - 7,042,692 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0217,054,260 - 7,107,087 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0217,103,123 - 7,155,957 (-)NCBIUU_Cfam_GSD_1.0
Cep295
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494778,782,851 - 78,837,056 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366741,054,439 - 1,108,551 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366741,054,329 - 1,108,524 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CEP295
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl926,103,283 - 26,155,076 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1926,103,267 - 26,155,067 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2929,689,107 - 29,797,270 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CEP295
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1184,911,256 - 84,982,396 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl184,916,192 - 84,982,296 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604340,818,040 - 40,889,748 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cep295
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473538,358,694 - 38,397,865 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473538,349,473 - 38,398,022 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSCLAT00000021643   ⟹   ENSCLAP00000021440
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_004955414807,276 - 860,316 (-)Ensembl
Ensembl Acc Id: ENSCLAT00000021644   ⟹   ENSCLAP00000021441
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_004955414807,276 - 855,973 (-)Ensembl
RefSeq Acc Id: XM_013511832   ⟹   XP_013367286
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_004955414806,238 - 860,273 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013367286 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000021440.1
  ENSCLAP00000021441.1
RefSeq Acc Id: XP_013367286   ⟸   XM_013511832
- UniProtKB: A0A8C2W3L4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCLAP00000021441   ⟸   ENSCLAT00000021644
Ensembl Acc Id: ENSCLAP00000021440   ⟸   ENSCLAT00000021643


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000014683 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000021643.1 UniProtKB/TrEMBL
  ENSCLAT00000021644.1 UniProtKB/TrEMBL
NCBI Gene Kiaa1731 ENTREZGENE
PANTHER ALMS1-RELATED UniProtKB/TrEMBL
  CENTROSOMAL PROTEIN OF 295 KDA UniProtKB/TrEMBL
UniProt A0A8C2VY57_CHILA UniProtKB/TrEMBL
  A0A8C2W3L4 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Cep295  centrosomal protein 295    centrosomal protein 295kDa  Symbol and/or name change 5135510 APPROVED
2015-08-25 Cep295  centrosomal protein 295kDa  Kiaa1731  KIAA1731 ortholog  Symbol and/or name change 5135510 APPROVED