Tyr (tyrosinase) - Rat Genome Database

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Gene: Tyr (tyrosinase) Chinchilla lanigera
Analyze
Symbol: Tyr
Name: tyrosinase
RGD ID: 8786886
Description: ENCODES a protein that exhibits copper ion binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cell population proliferation (ortholog); melanin biosynthetic process (ortholog); pigmentation (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH Albinism (ortholog); basal cell carcinoma (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intracellular membrane-bounded organelle (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554144,244,035 - 4,314,001 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554144,244,035 - 4,314,001 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References


Genomics

Comparative Map Data
Tyr
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554144,244,035 - 4,314,001 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554144,244,035 - 4,314,001 (-)NCBIChiLan1.0ChiLan1.0
TYR
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1189,177,875 - 89,295,759 (+)EnsemblGRCh38hg38GRCh38
GRCh381189,177,565 - 89,295,759 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371188,911,043 - 89,028,927 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361188,550,688 - 88,668,575 (+)NCBINCBI36hg18NCBI36
Build 341188,550,687 - 88,668,474NCBI
Celera1185,603,013 - 85,720,910 (-)NCBI
Cytogenetic Map11q14.3NCBI
HuRef1185,151,456 - 85,265,865 (+)NCBIHuRef
CHM1_11188,794,044 - 88,911,928 (+)NCBICHM1_1
Tyr
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39787,073,979 - 87,142,720 (-)NCBIGRCm39mm39
GRCm39 Ensembl787,073,979 - 87,142,720 (-)Ensembl
GRCm38787,424,771 - 87,493,512 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl787,424,771 - 87,493,512 (-)EnsemblGRCm38mm10GRCm38
MGSCv37794,575,915 - 94,641,921 (-)NCBIGRCm37mm9NCBIm37
MGSCv36787,303,166 - 87,369,172 (-)NCBImm8
Celera784,786,868 - 84,854,808 (-)NCBICelera
Cytogenetic Map7D3NCBI
cM Map749.01NCBI
Tyr
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21141,115,036 - 141,210,207 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1141,115,036 - 141,210,207 (-)Ensembl
Rnor_6.01151,012,598 - 151,106,802 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1151,012,598 - 151,106,802 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01157,322,968 - 157,416,594 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41143,641,257 - 143,746,315 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1139,445,261 - 139,532,999 (-)NCBICelera
Cytogenetic Map1q32NCBI
TYR
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11187,769,989 - 87,888,138 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1187,769,606 - 87,888,138 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01184,188,557 - 84,306,686 (+)NCBIMhudiblu_PPA_v0panPan3
TYR
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12110,799,940 - 10,894,187 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2110,799,940 - 10,894,191 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2110,649,581 - 10,749,918 (-)NCBI
ROS_Cfam_1.02110,980,195 - 11,074,816 (-)NCBI
UMICH_Zoey_3.12110,768,466 - 10,862,962 (-)NCBI
UNSW_CanFamBas_1.02110,834,102 - 10,934,647 (-)NCBI
UU_Cfam_GSD_1.02110,884,281 - 10,984,898 (-)NCBI
Tyr
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494774,823,234 - 74,920,675 (+)NCBI
SpeTri2.0NW_004936736421,623 - 519,085 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TYR
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl922,517,047 - 22,604,290 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1922,517,047 - 22,604,290 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2925,164,768 - 25,214,580 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TYR
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1180,330,051 - 80,444,646 (+)NCBI
ChlSab1.1180,330,051 - 80,444,646 (+)NCBI
Vero_WHO_p1.0NW_02366604345,283,848 - 45,401,720 (-)NCBI
Tyr
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624845844,492 - 933,098 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000023959   ⟹   ENSCLAP00000023733
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554144,244,035 - 4,314,001 (-)Ensembl
RefSeq Acc Id: XM_005379730   ⟹   XP_005379787
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554144,244,035 - 4,314,001 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005379787 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005379787   ⟸   XM_005379730
- Sequence:
RefSeq Acc Id: ENSCLAP00000023733   ⟸   ENSCLAT00000023959


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000016284 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000023733 ENTREZGENE
Ensembl Transcript ENSCLAT00000023959 ENTREZGENE
NCBI Gene Tyr ENTREZGENE