Ttl (tubulin tyrosine ligase) - Rat Genome Database

Name: Ttl
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Ttl (tubulin tyrosine ligase) Chinchilla lanigera

Analyze

Symbol:

Ttl

Name:

tubulin tyrosine ligase

RGD ID:

8784743

Description:

ENCODES a protein that exhibits tubulin-tyrosine ligase activity (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); positive regulation of mitotic cell cycle (ortholog); post-translational protein modification (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN spindle microtubule (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

tubulin--tyrosine ligase

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TTL (tubulin tyrosine ligase)	NCBI	Ortholog
Mus musculus (house mouse):	Ttl (tubulin tyrosine ligase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ttl (tubulin tyrosine ligase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TTL (tubulin tyrosine ligase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TTL (tubulin tyrosine ligase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ttl (tubulin tyrosine ligase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TTL (tubulin tyrosine ligase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TTL (tubulin tyrosine ligase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ttl (tubulin tyrosine ligase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955470	1,743,751 - 1,774,512 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955470	1,747,217 - 1,774,512 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

microtubule cytoskeleton organization (ISO)

positive regulation of mitotic cell cycle (ISO)

post-translational protein modification (ISO)

regulation of axon extension (ISO)

regulation of metaphase plate congression (ISO)

Cellular Component

spindle microtubule (ISO)

Molecular Function

tubulin-tyrosine ligase activity (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

Ttl
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955470	1,743,751 - 1,774,512 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955470	1,747,217 - 1,774,512 (-)	NCBI	ChiLan1.0	ChiLan1.0

TTL
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	112,482,156 - 112,541,739 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	112,482,156 - 112,541,739 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	113,239,733 - 113,299,316 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	112,956,214 - 113,006,694 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	112,956,128 - 113,006,212	NCBI
Celera	2	106,625,279 - 106,675,764 (+)	NCBI		Celera
Cytogenetic Map	2	q14.1	NCBI
HuRef	2	105,693,725 - 105,744,724 (+)	NCBI		HuRef
CHM1_1	2	113,243,890 - 113,294,368 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	112,908,795 - 112,968,389 (+)	NCBI		T2T-CHM13v2.0

Ttl
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	128,907,867 - 128,938,203 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	128,907,862 - 128,938,203 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	129,065,947 - 129,096,283 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	129,065,942 - 129,096,283 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	128,891,683 - 128,922,019 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	128,757,430 - 128,785,190 (+)	NCBI		MGSCv36	mm8
Celera	2	130,293,491 - 130,323,607 (+)	NCBI		Celera
Cytogenetic Map	2	F1	NCBI
cM Map	2	62.65	NCBI

Ttl
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	136,752,025 - 136,781,758 (+)	NCBI		GRCr8
mRatBN7.2	3	116,298,813 - 116,328,538 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	116,298,797 - 116,328,538 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	120,196,066 - 120,222,520 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	128,791,655 - 128,818,105 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	126,452,127 - 126,478,585 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	121,596,773 - 121,626,581 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	121,596,791 - 121,624,048 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	128,388,189 - 128,417,974 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	116,671,419 - 116,697,989 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	116,576,991 - 116,603,562 (+)	NCBI
Celera	3	115,124,248 - 115,150,813 (+)	NCBI		Celera
Cytogenetic Map	3	q36	NCBI

TTL
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	15,591,253 - 15,632,233 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	15,594,017 - 15,635,068 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	89,526,022 - 89,567,068 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	113,505,416 - 113,546,896 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	113,505,416 - 113,546,896 (+)	Ensembl	panpan1.1		panPan2

TTL
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	36,735,836 - 36,770,292 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	36,735,788 - 36,767,016 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	36,504,890 - 36,539,300 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	37,511,436 - 37,545,848 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	37,511,409 - 37,545,835 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	36,649,169 - 36,683,745 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	36,703,448 - 36,738,023 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	36,917,312 - 36,951,900 (+)	NCBI		UU_Cfam_GSD_1.0

Ttl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	82,096,219 - 82,130,048 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936783	989,269 - 1,025,690 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936783	989,269 - 1,024,537 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TTL
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	43,977,265 - 44,022,635 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	43,980,634 - 44,022,611 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	45,574,533 - 45,617,612 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TTL
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	15,500,417 - 15,540,252 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	15,500,520 - 15,538,184 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666080	4,140,168 - 4,186,856 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ttl
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624749	12,549,969 - 12,595,490 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624749	12,550,017 - 12,595,397 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005400605	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013522827	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01052654	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01280281	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000007781 ⟹ ENSCLAP00000007662

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955470	1,743,751 - 1,774,512 (-)	Ensembl

RefSeq Acc Id:

XM_005400605 ⟹ XP_005400662

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955470	1,747,217 - 1,774,512 (-)	NCBI

Sequence:

show sequence

CGCCATGTACACCTTCGTGGTCCGCGACGAGAACAGCAGCGTCTACGCCGAGGTGTCCCGGCTG
CTCCTCGCCACCGGCCACTGGAAGAGGCTGAGGCGGGACAACCCCAGGTTCAACCTGATGCTGG
GGGAGAGGAACCGGCTTCCTTTCGGGAGACTGGGTCATGAGCCTGGCCTGCTGCAGCTGGTGAA
TTACTACAGGGGGGCCGACAAACTGTGTCGCAAAGCTTCTTTAGTGAAGCTGATCAAGACAAGC
CCGGAACTGGCTGAGTCCTGTACCTGGTTCCCTGAGTCCTATGTGATATATCCGACTAATCTCA
AGACCCCAGTTGCTCCAGCGCAGAATGGAATCCAGCCACTGGTCAGTAACTCACGGACAGATGA
AAGAGAATTCTTCCTAGCTTCTTATAACAGAAAGAAGGAGGATGGGGAAGGCAACGTTTGGATT
GCAAAGTCATCAGCTGGTGCCAAAGGCGAAGGCATCCTCATCTCCTCAGAGGCGTCAGAGCTTC
TGGATTTCATAGACAACCAGGGCCAGGTGCACGTGATCCAGAAATACCTCGAGCGCCCTCTGCT
ACTGGAGCCAGGGCACCGCAAGTTTGACATCCGAAGCTGGGTCTTGGTGGACCATCAGTATAAT
ATCTACCTCTACAGAGAGGGTGTTCTCCGAACTGCTTCAGAACCATATCATGTGGATAATTTCC
AGGACAAGACCTGCCATTTGACCAATCACTGCATTCAAAAGGAGTACTCAAAGAACTATGGGAA
GTATGAGGAGGGGAATGAAATGTTCTTTGAGGAGTTCAATCAGTACCTAATGAGTGCTTTGAAC
ATTACCTTGGAAACTAGTATCTTACAACAAATCAAGCATATAATAAGGAGCTGCCTCATGAGCG
TGGAGCCGGCCATCAGCACCAAGCACCTCCCTTACCAGAGCTTCCAGCTCTTTGGCTTTGACTT
CATGGTGGACGAAGAGCTGAAGGTGTGGCTCATTGAGGTCAACGGCGCCCCGGCTTGTGCTCAG
AAGCTCTATGCAGAACTGTGCCAGGGCATCGTGGACTTAGCCATATCCAGTGTCTTCCCGCCTC
CAGATGTGGAGCAGCAGCCACAGCTAGCTGCGTTCATCAAGCTGTGACCGACGGGGCCCTCAGA
GCTGCCTCGGGAAATGCACAAGGTCCTGCTCCACGGCGAGGCGAGATGACCGGACTACTCCATA
GCAAGCCGAGCTGGGAAAGAGAGGCAACTTGAACAGTGTGACAGAAGACAGCAGGAGAAGAGGA
AGCGACGCCCGGAGCTGGCTGCTCAGGGAGCTGCCCTGGGGAGCTCTCAGCAGTGCTGTTGCAG
TGGAGGAAGCTGAGGCACATGTCTCTGAGCGGGGAGCGGAATGTTCATCTGTGGGGGCGAAGGC
AGGGCTTTGGTGCCTGTGTGTTCTCTTCCTTGGGAGGTCTCTGCTTAGGCGGCGCTGGGGGCAG
AGCTGTCCTCCCACGTGTGGCAGACTGCGGGGCTGCTGCTTGGTCTTTCCACCCACCCGCTGCA
GCCGTAGTGCCTTAGCTCTGTGCCCAGCTGCAGCCTGGCTTTCTGGGACACAAAGTGGATGTTA
GAGCACTTTGGAGCGGCCCATATGTCCCTGCTCGTCCCCATCGCGATACTCTGTCCTCCTAAAC
TCTGGACAAGCATGCACCAACAGTCCTTAGTTTCGTGCCGTGTGTCGGCCTCTCTGCGGAGGCT
GCTGTCCTCATCTCCTTTCCGGTGGCGAGGGGTCCAGCTCCTGTCGGGGGTCCTCTGGATAGGG
CCCAAACAGCACCCACTGTGCACTCTCGAGCTGCTCTCTGCATGTTTCAGAAACAAAGCAGCAA
GTCTGCCAAGCTTAGAAGCCTCAAATAAGCATGAGAGAGGACAAACCATACAGTATCTTGCTTT
ACTTAAGAGGTTGAACGTGTGTGTGAGGGGGGTGTCTTTGAAATATGACGATTCTCAGTTATTT
TTGTTTTAATCAGAATGCTAACTGCAGACCTGCAAAGTCTCCTTTCCTTCAATTTTTAAAAATT
TATAAAATCTTGAGAGTCAGGGAGATAGAATTCCATGCCTCGTATCCCCTCCAGATGGCCCTGG
CCAGACACAGGTGTCTTCCCCTCTTTTTGGTTTCCTTGTGCTTCAAGCACCTTCTCTAAGAGCT
GGTGGGACGGGTTCCATCCCAAGAAGGATTCTGAGTCTGCTTGTGCCTGGAAGCGTCGGGAGAG
AGGCTCTCTGAGTAAGTGTGTGTCCTACCTAGATGGGAAAGAGGCAGTTCCAGAGCTCCTTGCA
GCTTCTTGTAAGTTTCAACAAAGGTATACAAAGGTATACAAAGATGTGGTTTCTCAGTACCAGA
TCAAGTGATATTTTGATCCACAGATCGCGGGAGGCTTCTTGGGAGGCCACGTCCCTAGCAGTGG
AAAGATGTTTTTTGTCATCACTGTGATCCAAATACTTAGGCTTTTCTTTTTTTGAGACAAGGTC
TTGCCGTGCAGTTCAGGCCAGCCTTGAACTCACTTCTGTAGGCT

hide sequence

RefSeq Acc Id:

XM_013522827 ⟹ XP_013378281

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955470	1,747,217 - 1,774,512 (-)	NCBI

Sequence:

show sequence

CGCCATGTACACCTTCGTGGTCCGCGACGAGAACAGCAGCGTCTACGCCGAGGTGTCCCGGCTG
CTCCTCGCCACCGGCCACTGGAAGAGGCTGAGGCGGGACAACCCCAGGTTCAACCTGATGCTGG
GGGAGAGGAACCGGCTTCCTTTCGGGAGACTGGGTCATGAGCCTGGCCTGCTGCAGCTGGTGAA
TTACTACAGGGGGGCCGACAAACTGTGTCGCAAAGCTTCTTTAGTGAAGCTGATCAAGACAAGC
CCGGAACTGGCTGAGTCCTGTACCTGGTTCCCTGAGTCCTATGTGATATATCCGACTAATCTCA
AGACCCCAGTTGCTCCAGCGCAGAATGGAATCCAGCCACTGGTCAGTAACTCACGGACAGATGA
AAGAGAATTCTTCCTAGCTTCTTATAACAGAAAGAAGGAGGATGGGGAAGGCAACGTTTGGATT
GCAAAGTCATCAGCTGGTGCCAAAGACCATCTGGCCATTGGTCCTCATTTCTATCCCTGGGCCA
GTAGACCTCACCTTCTTTTTCCACCAGCCATGAGACAGGAGGGCGTCACCTGGGATCTCCTGAG
AGTGGGAGAGTTGGACTCTTGCCACCAGCCAGGCGAAGGCATCCTCATCTCCTCAGAGGCGTCA
GAGCTTCTGGATTTCATAGACAACCAGGGCCAGGTGCACGTGATCCAGAAATACCTCGAGCGCC
CTCTGCTACTGGAGCCAGGGCACCGCAAGTTTGACATCCGAAGCTGGGTCTTGGTGGACCATCA
GTATAATATCTACCTCTACAGAGAGGGTGTTCTCCGAACTGCTTCAGAACCATATCATGTGGAT
AATTTCCAGGACAAGACCTGCCATTTGACCAATCACTGCATTCAAAAGGAGTACTCAAAGAACT
ATGGGAAGTATGAGGAGGGGAATGAAATGTTCTTTGAGGAGTTCAATCAGTACCTAATGAGTGC
TTTGAACATTACCTTGGAAACTAGTATCTTACAACAAATCAAGCATATAATAAGGAGCTGCCTC
ATGAGCGTGGAGCCGGCCATCAGCACCAAGCACCTCCCTTACCAGAGCTTCCAGCTCTTTGGCT
TTGACTTCATGGTGGACGAAGAGCTGAAGGTGTGGCTCATTGAGGTCAACGGCGCCCCGGCTTG
TGCTCAGAAGCTCTATGCAGAACTGTGCCAGGGCATCGTGGACTTAGCCATATCCAGTGTCTTC
CCGCCTCCAGATGTGGAGCAGCAGCCACAGCTAGCTGCGTTCATCAAGCTGTGACCGACGGGGC
CCTCAGAGCTGCCTCGGGAAATGCACAAGGTCCTGCTCCACGGCGAGGCGAGATGACCGGACTA
CTCCATAGCAAGCCGAGCTGGGAAAGAGAGGCAACTTGAACAGTGTGACAGAAGACAGCAGGAG
AAGAGGAAGCGACGCCCGGAGCTGGCTGCTCAGGGAGCTGCCCTGGGGAGCTCTCAGCAGTGCT
GTTGCAGTGGAGGAAGCTGAGGCACATGTCTCTGAGCGGGGAGCGGAATGTTCATCTGTGGGGG
CGAAGGCAGGGCTTTGGTGCCTGTGTGTTCTCTTCCTTGGGAGGTCTCTGCTTAGGCGGCGCTG
GGGGCAGAGCTGTCCTCCCACGTGTGGCAGACTGCGGGGCTGCTGCTTGGTCTTTCCACCCACC
CGCTGCAGCCGTAGTGCCTTAGCTCTGTGCCCAGCTGCAGCCTGGCTTTCTGGGACACAAAGTG
GATGTTAGAGCACTTTGGAGCGGCCCATATGTCCCTGCTCGTCCCCATCGCGATACTCTGTCCT
CCTAAACTCTGGACAAGCATGCACCAACAGTCCTTAGTTTCGTGCCGTGTGTCGGCCTCTCTGC
GGAGGCTGCTGTCCTCATCTCCTTTCCGGTGGCGAGGGGTCCAGCTCCTGTCGGGGGTCCTCTG
GATAGGGCCCAAACAGCACCCACTGTGCACTCTCGAGCTGCTCTCTGCATGTTTCAGAAACAAA
GCAGCAAGTCTGCCAAGCTTAGAAGCCTCAAATAAGCATGAGAGAGGACAAACCATACAGTATC
TTGCTTTACTTAAGAGGTTGAACGTGTGTGTGAGGGGGGTGTCTTTGAAATATGACGATTCTCA
GTTATTTTTGTTTTAATCAGAATGCTAACTGCAGACCTGCAAAGTCTCCTTTCCTTCAATTTTT
AAAAATTTATAAAATCTTGAGAGTCAGGGAGATAGAATTCCATGCCTCGTATCCCCTCCAGATG
GCCCTGGCCAGACACAGGTGTCTTCCCCTCTTTTTGGTTTCCTTGTGCTTCAAGCACCTTCTCT
AAGAGCTGGTGGGACGGGTTCCATCCCAAGAAGGATTCTGAGTCTGCTTGTGCCTGGAAGCGTC
GGGAGAGAGGCTCTCTGAGTAAGTGTGTGTCCTACCTAGATGGGAAAGAGGCAGTTCCAGAGCT
CCTTGCAGCTTCTTGTAAGTTTCAACAAAGGTATACAAAGGTATACAAAGATGTGGTTTCTCAG
TACCAGATCAAGTGATATTTTGATCCACAGATCGCGGGAGGCTTCTTGGGAGGCCACGTCCCTA
GCAGTGGAAAGATGTTTTTTGTCATCACTGTGATCCAAATACTTAGGCTTTTCTTTTTTTGAGA
CAAGGTCTTGCCGTGCAGTTCAGGCCAGCCTTGAACTCACTTCTGTAGGCT

hide sequence

Protein Sequences


Protein RefSeqs	XP_005400662	(Get FASTA)	NCBI Sequence Viewer
	XP_013378281	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000007662
	ENSCLAP00000007662.1

RefSeq Acc Id:	XP_005400662 ⟸ XM_005400605
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2V0U2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MYTFVVRDENSSVYAEVSRLLLATGHWKRLRRDNPRFNLMLGERNRLPFGRLGHEPGLLQLVNY YRGADKLCRKASLVKLIKTSPELAESCTWFPESYVIYPTNLKTPVAPAQNGIQPLVSNSRTDER EFFLASYNRKKEDGEGNVWIAKSSAGAKGEGILISSEASELLDFIDNQGQVHVIQKYLERPLLL EPGHRKFDIRSWVLVDHQYNIYLYREGVLRTASEPYHVDNFQDKTCHLTNHCIQKEYSKNYGKY EEGNEMFFEEFNQYLMSALNITLETSILQQIKHIIRSCLMSVEPAISTKHLPYQSFQLFGFDFM VDEELKVWLIEVNGAPACAQKLYAELCQGIVDLAISSVFPPPDVEQQPQLAAFIKL hide sequence

RefSeq Acc Id:

XP_013378281 ⟸ XM_013522827

- Peptide Label:

isoform X1

- Sequence:

show sequence

MYTFVVRDENSSVYAEVSRLLLATGHWKRLRRDNPRFNLMLGERNRLPFGRLGHEPGLLQLVNY
YRGADKLCRKASLVKLIKTSPELAESCTWFPESYVIYPTNLKTPVAPAQNGIQPLVSNSRTDER
EFFLASYNRKKEDGEGNVWIAKSSAGAKDHLAIGPHFYPWASRPHLLFPPAMRQEGVTWDLLRV
GELDSCHQPGEGILISSEASELLDFIDNQGQVHVIQKYLERPLLLEPGHRKFDIRSWVLVDHQY
NIYLYREGVLRTASEPYHVDNFQDKTCHLTNHCIQKEYSKNYGKYEEGNEMFFEEFNQYLMSAL
NITLETSILQQIKHIIRSCLMSVEPAISTKHLPYQSFQLFGFDFMVDEELKVWLIEVNGAPACA
QKLYAELCQGIVDLAISSVFPPPDVEQQPQLAAFIKL

hide sequence

RefSeq Acc Id:

ENSCLAP00000007662 ⟸ ENSCLAT00000007781

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000005372	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000007781	ENTREZGENE
	ENSCLAT00000007781.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.11480	UniProtKB/TrEMBL
	ATP-grasp fold, B domain	UniProtKB/TrEMBL
InterPro	TTL/TTLL_fam	UniProtKB/TrEMBL
NCBI Gene	Ttl	ENTREZGENE
PANTHER	TUBULIN--TYROSINE LIGASE	UniProtKB/TrEMBL
	TUBULIN--TYROSINE LIGASE	UniProtKB/TrEMBL
Pfam	TTL	UniProtKB/TrEMBL
PROSITE	TTL	UniProtKB/TrEMBL
Superfamily-SCOP	Glutathione synthetase ATP-binding domain-like	UniProtKB/TrEMBL
UniProt	A0A8C2V0U2	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

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MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar