Relch (RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing) - Rat Genome Database
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Gene: Relch (RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing) Chinchilla lanigera
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Symbol: Relch
Name: RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing
RGD ID: 8772730
Description: INVOLVED IN intracellular cholesterol transport (ortholog); ASSOCIATED WITH chromosome 18q deletion syndrome (ortholog); multiple congenital anomalies-hypotonia-seizures syndrome 1 (ortholog); FOUND IN recycling endosome (ortholog); trans-Golgi network (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: Kiaa1468; KIAA1468 ortholog; lisH domain and HEAT repeat-containing protein KIAA1468 homolog
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540246,115,066 - 46,224,752 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540246,114,835 - 46,226,330 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
Relch
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540246,115,066 - 46,224,752 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540246,114,835 - 46,226,330 (+)NCBIChiLan1.0ChiLan1.0
RELCH
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1862,187,255 - 62,310,217 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl1862,187,255 - 62,310,249 (+)EnsemblGRCh38hg38GRCh38
GRCh381862,187,255 - 62,310,249 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371859,854,488 - 59,977,482 (+)NCBIGRCh37GRCh37hg19GRCh37
GRCh371859,854,506 - 59,974,355 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361858,005,504 - 58,125,335 (+)NCBINCBI36hg18NCBI36
Build 341858,039,436 - 58,124,183NCBI
Celera1856,573,751 - 56,693,583 (+)NCBI
Cytogenetic Map18q21.33NCBI
HuRef1856,565,413 - 56,685,241 (+)NCBIHuRef
CHM1_11859,850,036 - 59,969,896 (+)NCBICHM1_1
Relch
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391105,591,570 - 105,682,856 (+)NCBIGRCm39mm39
GRCm381105,663,843 - 105,755,131 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1105,663,861 - 105,755,191 (+)EnsemblGRCm38mm10GRCm38
MGSCv371107,560,438 - 107,651,708 (+)NCBIGRCm37mm9NCBIm37
MGSCv361107,491,460 - 107,581,622 (+)NCBImm8
Celera1108,513,201 - 108,605,107 (+)NCBICelera
Cytogenetic Map1E2.1NCBI
Relch
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21321,806,972 - 21,902,807 (+)NCBI
Rnor_6.0 Ensembl1325,656,983 - 25,752,792 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01325,656,983 - 25,752,792 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01330,820,433 - 30,915,037 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41311,834,138 - 11,930,253 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11311,834,129 - 11,930,186 (+)NCBI
Celera1321,677,556 - 21,772,993 (+)NCBICelera
Cytogenetic Map13p11NCBI
RELCH
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11858,875,414 - 58,995,036 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1858,875,013 - 58,995,036 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01855,557,276 - 55,677,161 (+)NCBIMhudiblu_PPA_v0panPan3
RELCH
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl114,579,381 - 14,683,555 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1114,573,377 - 14,683,795 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Relch
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049364973,021,962 - 3,121,028 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RELCH
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1159,207,616 - 159,317,641 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11159,207,951 - 159,317,675 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21176,670,499 - 176,781,315 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RELCH
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11817,467,242 - 17,589,433 (-)NCBI
ChlSab1.1 Ensembl1817,466,750 - 17,589,413 (-)Ensembl
Relch
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247927,916,354 - 8,012,976 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000011397   ⟹   ENSCLAP00000011260
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495540246,115,066 - 46,224,752 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000011398   ⟹   ENSCLAP00000011261
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495540246,115,066 - 46,224,752 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000011399   ⟹   ENSCLAP00000011262
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495540246,115,066 - 46,224,752 (+)Ensembl
RefSeq Acc Id: XM_005373018   ⟹   XP_005373075
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540246,114,835 - 46,226,330 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005373019   ⟹   XP_005373076
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540246,114,835 - 46,226,330 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013511190   ⟹   XP_013366644
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540246,114,835 - 46,226,330 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013511192   ⟹   XP_013366646
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540246,114,835 - 46,211,548 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013511197   ⟹   XP_013366651
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540246,114,835 - 46,205,199 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001232916
RefSeq Status:
Type: NON-CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540246,114,835 - 46,205,418 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_005373075   ⟸   XM_005373018
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005373076   ⟸   XM_005373019
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_013366644   ⟸   XM_013511190
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_013366646   ⟸   XM_013511192
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_013366651   ⟸   XM_013511197
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: ENSCLAP00000011260   ⟸   ENSCLAT00000011397
RefSeq Acc Id: ENSCLAP00000011262   ⟸   ENSCLAT00000011399
RefSeq Acc Id: ENSCLAP00000011261   ⟸   ENSCLAT00000011398


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000007772 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000011260 ENTREZGENE
  ENSCLAP00000011261 ENTREZGENE
Ensembl Transcript ENSCLAT00000011397 ENTREZGENE
  ENSCLAT00000011398 ENTREZGENE
NCBI Gene Kiaa1468 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-15 Relch  RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing  Kiaa1468  KIAA1468 ortholog  Symbol and/or name change 5135510 APPROVED