Ccne1 (cyclin E1) - Rat Genome Database

Name: Ccne1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Ccne1 (cyclin E1) Chinchilla lanigera

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Symbol:

Ccne1

Name:

cyclin E1

RGD ID:

8764969

Description:

ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); antral ovarian follicle growth (ortholog); cellular response to nutrient (ortholog); PARTICIPATES IN G1/S transition pathway; mTOR signaling pathway; ASSOCIATED WITH Bowen's Disease (ortholog); breast adenocarcinoma (ortholog); breast cancer (ortholog); FOUND IN centrosome (ortholog); cyclin E1-CDK2 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

G1/S-specific cyclin-E1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CCNE1 (cyclin E1)	NCBI	Ortholog
Mus musculus (house mouse):	Ccne1 (cyclin E1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ccne1 (cyclin E1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CCNE1 (cyclin E1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CCNE1 (cyclin E1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ccne1 (cyclin E1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CCNE1 (cyclin E1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CCNE1 (cyclin E1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ccne1 (cyclin E1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

NCBI Annotation Information:

Annotation category: partial on reference assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955468	7,803,346 - 7,814,872 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955468	7,803,610 - 7,814,872 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Bowen's Disease (ISO)

breast adenocarcinoma (ISO)

breast cancer (ISO)

Breast Neoplasms (ISO)

cervix uteri carcinoma in situ (ISO)

Colonic Neoplasms (ISO)

Diabetic Nephropathies (ISO)

Disease Progression (ISO)

Endometrioid Carcinomas (ISO)

Experimental Mammary Neoplasms (ISO)

Germ Cell and Embryonal Neoplasms (ISO)

head and neck squamous cell carcinoma (ISO)

hepatitis (ISO)

hepatocellular carcinoma (ISO)

hypertension (ISO)

liver cancer (ISO)

lung non-small cell carcinoma (ISO)

Lymphatic Metastasis (ISO)

medulloblastoma (ISO)

Neoplasm Metastasis (ISO)

ovarian carcinoma (ISO)

Ovarian Neoplasms (ISO)

prostate carcinoma in situ (ISO)

Prostatic Neoplasms (ISO)

Recurrence (ISO)

renal cell carcinoma (ISO)

Reperfusion Injury (ISO)

Spinal Cord Injuries (ISO)

urinary bladder cancer (ISO)

Uterine Cervical Neoplasms (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

animal organ regeneration (ISO)

antral ovarian follicle growth (ISO)

cellular response to nutrient (ISO)

chromosome organization involved in meiotic cell cycle (ISO)

DNA replication initiation (ISO)

G1/S transition of mitotic cell cycle (ISO)

homologous chromosome pairing at meiosis (ISO)

liver development (ISO)

negative regulation of transcription by RNA polymerase II (ISO)

positive regulation of cell differentiation (ISO)

positive regulation of mesenchymal stem cell proliferation (ISO)

protein phosphorylation (ISO)

regulation of cell cycle (ISO)

regulation of protein localization (ISO)

response to corticosterone (ISO)

response to cytokine (ISO)

response to estradiol (ISO)

response to ethanol (ISO)

response to methylmercury (ISO)

response to progesterone (ISO)

response to purine-containing compound (ISO)

response to steroid hormone (ISO)

response to vitamin E (ISO)

response to xenobiotic stimulus (ISO)

telomere maintenance (ISO)

Wnt signaling pathway (ISO)

Cellular Component

centrosome (ISO)

cyclin E1-CDK2 complex (ISO)

cyclin-dependent protein kinase holoenzyme complex (ISO)

nucleoplasm (ISO)

nucleus (ISO)

Molecular Function

cyclin-dependent protein serine/threonine kinase regulator activity (ISO)

kinase activity (ISO)

protein binding (ISO)

protein kinase binding (ISO)

protein-containing complex binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

G1/S transition pathway (ISO)

mTOR signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Ccne1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955468	7,803,346 - 7,814,872 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955468	7,803,610 - 7,814,872 (-)	NCBI	ChiLan1.0	ChiLan1.0

CCNE1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	29,811,991 - 29,824,312 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	29,811,991 - 29,824,312 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	30,302,898 - 30,315,219 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	34,994,741 - 35,007,059 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	34,995,400 - 35,007,058	NCBI
Celera	19	27,001,121 - 27,013,439 (+)	NCBI		Celera
Cytogenetic Map	19	q12	NCBI
HuRef	19	26,814,506 - 26,826,846 (+)	NCBI		HuRef
CHM1_1	19	30,304,072 - 30,316,380 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	32,337,722 - 32,350,035 (+)	NCBI		T2T-CHM13v2.0

Ccne1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	37,797,409 - 37,806,915 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	37,797,409 - 37,806,959 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	38,097,984 - 38,107,490 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	38,097,984 - 38,107,534 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	38,883,003 - 38,892,509 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	37,806,744 - 37,816,090 (-)	NCBI		MGSCv36	mm8
Celera	7	33,255,165 - 33,271,131 (-)	NCBI		Celera
Cytogenetic Map	7	B3	NCBI
cM Map	7	25.35	NCBI

Ccne1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	99,918,672 - 99,927,986 (-)	NCBI		GRCr8
mRatBN7.2	1	90,781,947 - 90,791,188 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	90,781,949 - 90,791,101 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	96,177,587 - 96,186,820 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	104,643,512 - 104,652,745 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	97,935,949 - 97,945,186 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	94,485,830 - 94,495,112 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	94,485,832 - 94,494,980 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	95,575,136 - 95,584,387 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	90,568,189 - 90,577,426 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	90,646,304 - 90,655,502 (-)	NCBI
Celera	1	85,114,968 - 85,124,206 (-)	NCBI		Celera
RH 3.4 Map	1	885.7	RGD
Cytogenetic Map	1	q21	NCBI

CCNE1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	35,791,482 - 35,803,832 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	37,788,541 - 37,800,858 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	26,739,285 - 26,751,630 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	35,497,576 - 35,509,289 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	35,496,700 - 35,510,295 (+)	Ensembl	panpan1.1		panPan2

CCNE1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	121,688,622 - 121,697,533 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	121,688,796 - 121,697,649 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	121,057,141 - 121,067,963 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	122,317,344 - 122,328,414 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	122,317,344 - 122,327,556 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	121,897,115 - 121,908,170 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	121,503,639 - 121,514,505 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	122,568,738 - 122,579,545 (-)	NCBI		UU_Cfam_GSD_1.0

Ccne1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	6,098,056 - 6,108,393 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936570	5,536,672 - 5,548,008 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936570	5,536,817 - 5,547,880 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CCNE1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	39,919,624 - 39,933,363 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	39,919,541 - 39,933,224 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	35,242,127 - 35,255,298 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CCNE1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	24,879,923 - 24,888,985 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666073	2,422,215 - 2,433,635 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ccne1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624794	4,957,178 - 4,967,140 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624794	4,957,156 - 4,967,058 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005400106	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005400107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01052008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01123114	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000023847 ⟹ ENSCLAP00000023623

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955468	7,803,346 - 7,814,872 (-)	Ensembl

Ensembl Acc Id:

ENSCLAT00000023848 ⟹ ENSCLAP00000023624

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955468	7,803,346 - 7,814,872 (-)	Ensembl

RefSeq Acc Id:

XM_005400106 ⟹ XP_005400163

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955468	7,803,610 - 7,814,872 (-)	NCBI

Sequence:

show sequence

GGACACAGTTTCGGGTGAGGCCCTTCGCGGGCTGCGGGGACGGGCGCCGCGGGCGGGGACTCTT
GGGGCGCCCGGGCTGGGCCGGGTCGGGCCGGGAGTGGGGGTGGGGCGCTGGGTCTTCGGGTCCC
GGGGGCGTCCGCGCGAGGTGCCCGGGGCAGGGTGGCTCAGAGACGGGTCGGGGCAAGGTGCTGA
GGGGAGGCTGAGGCAGCCCTGGCGCCAAGGGGGGCGACGGGCGGACAGGGAGCCGGGGGGGCTG
TGTGGGCCCCTCCCCCACCCCGGACTCGGACCCGGGATCGCGGGCTGCGGGCGCCGCCGCGGGT
GACAGGCCACCCCGGCCCATCGGCCATTTTCCCGGCCGGCCCGGGAGGCTCCCGCCGCCGCCGC
CGCCCGCGCGGGAGGGGGGAGGGGTGCTGGGGCGGGCGGCGGGCCCGGGCCCCCTCCGCCGGCC
GCCTCACCCCGCTGCCCGCTCCGTGCCCCCAGGTCTGAGGTCGGAGCCCGAGCCCTGCGCCATG
CCAAGGGAAAGGAAGGAGAGAGATGCCAAGGAGCAGGACACCATGAAAGAGGAAGGTGGCACCG
ACGTCTCCGTGCGCTCCAGGAAAAGGAAGGCAAACGTGGCCGTTTTTCTGCAGGACCCTGACGA
AGAAGTTGCCAAAATTGACAGGACTTCCAGAGGCCAATGTGGCAGTCAGGCAAGAAAAAGGAGG
CCTGGAGATCACTCCCTGTCTTGCGACAATAATACAGTATGTGCAAACCCCTCCTTGATGCCCA
CACCTGCTAAAGAAGACGGTGAGCCAGAATATCCAATTTCTACATTCGTGCCTCGGAAATCAGC
CCCGCCACCCAGGGCCTCGCCGCTGCCCGTACTGAACTGGGCCAATAGAGAGGAGGTTTGGAAA
ATCATGTTAAACAAGGAAGAGACATACATACGCGATGAGCACTTTTTGCAGCGACATCCTCTTC
TACAGCCTAAAATGCGAGCAATTCTTCTGGATTGGTTAATGGAGGTGTGTGAAGTCTATAAACT
TCACAGGGAGACATTTTACTTGGCACAAGATTTCTTTGATCGGTATATGGCAACACAAGAAAAT
ATTGTAAAAACACTTTTACAGCTTATCGGGATTTCATCTTTATTTATTGCTGCCAAACTTGAGG
AAATCTATCCTCCCAAGTTGCACCAGTTTGCTTACGTTACGGATGGGGCTTGCTCAGGAGATGA
AATTCTCACCATGGAATTAGTGATTATGCAGGCTCTGAAGTGGCGTTTAAGTCCCCTGACCATT
GTGTCCTGGCTGAATGTGTACATGCAGGTTGCATATCTGAACGACGTGTATGAAGTGCTGCTGC
CGCAGTATCCGCAGCACATCTTTATACAGGTCGCAGAGCTTTTAGATCTCTGTGTTCTGGATGT
TGGCTGCTTAGAATTTCCTTATGGTGTCCTTGCTGCTTCTGCCTTATATCATTTCACTTCATCT
GAAATGATGCAGAAAGTTTCAGGGTATCAGTGGTGCGATATAGAGAAGTGTGTCAAATGGATGA
TTCCATTTGCCATGGTTATAAGGGAGGCAGGAAATTCCAAAGTAAAGCACTTCCGGGGAGTGCC
TATTGAAGATTCCCACAACATACAGACTCACATCAACAGCTTGGATTTGCTGGACAAAGCCCAA
GCAAAGAAAGCCATATTGTTGGAAGAGAGTAGGCTTTCTCCTGTCCCATCCGGAGTGCTTACCC
CGCCGCAGAGCAGTAAGAAGCAGAGCAGTGAGCCAGACACGGCGTGACCACACCAGCCTTCTCC
GCCACAGACAGTTGTGTGGAAGTGCCTGCCCCTCGCTCTCTGTGTGCTGCAGCGGAGGCCTGTG
CTAGCTTTTACAGATATTTAAGTGGAAGAGTGTCTCTCCTGTGACAAGTTTTTCTGTGGATGGC
TTTGGACAGGGAGAAATATTTTTATTAAATGCTTAGTTTTTTTAAATAAGTGGGTCAAGTACAC
CAGCCACCTCCCGAACACCAACGCGTGCTCCAGATGCTGCTAAGGAAGGTGATACTTGGCTTGA
TCAACTTCACAGAAATGAGAAAGGCTTCGAGTGGAGGAGCGCCCGTGCTTCGCTGATCTCCACG
CGGGTGCTCTGAGTTGCGTGGTGTTGGGTGACGCACGCGGTCAAGCCCTCACTGGGGTGCAGAG
CCCACGACAGCGGGGCAGGGCTGCACTTCAGACACTGTCATCGGCAGTGGACCATGCCTTTCAT
GAACTCTTGCAAGTGCTGCTATATCTATCCCTGTTGAATAAAGATAATACTGTCTTTGA

hide sequence

RefSeq Acc Id:

XM_005400107 ⟹ XP_005400164

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955468	7,803,610 - 7,814,872 (-)	NCBI

Sequence:

show sequence

GGACACAGTTTCGGGTGAGGCCCTTCGCGGGCTGCGGGGACGGGCGCCGCGGGCGGGGACTCTT
GGGGCGCCCGGGCTGGGCCGGGTCGGGCCGGGAGTGGGGGTGGGGCGCTGGGTCTTCGGGTCCC
GGGGGCGTCCGCGCGAGGTGCCCGGGGCAGGGTGGCTCAGAGACGGGTCGGGGCAAGGTGCTGA
GGGGAGGCTGAGGCAGCCCTGGCGCCAAGGGGGGCGACGGGCGGACAGGGAGCCGGGGGGGCTG
TGTGGGCCCCTCCCCCACCCCGGACTCGGACCCGGGATCGCGGGCTGCGGGCGCCGCCGCGGGT
GACAGGCCACCCCGGCCCATCGGCCATTTTCCCGGCCGGCCCGGGAGGCTCCCGCCGCCGCCGC
CGCCCGCGCGGGAGGGGGGAGGGGTGCTGGGGCGGGCGGCGGGCCCGGGCCCCCTCCGCCGGCC
GCCTCACCCCGCTGCCCGCTCCGTGCCCCCAGGTCTGAGGTCGGAGCCCGAGCCCTGCGCCATG
CCAAGGGAAAGGAAGGAGAGAGATGCCAAGGAGCAGGACACCATGAAAGAGGAAGGTGGCACCG
ACGTCTCCGTGCGCTCCAGGAAAAGGAAGGCAAACGTGGCCGTTTTTCTGCAGGACCCTGACGA
AGAAGTTGCCAAAATTGACAGGACTTCCAGAGGCCAATGTGGCAGTCAGTCTTGCGACAATAAT
ACAGTATGTGCAAACCCCTCCTTGATGCCCACACCTGCTAAAGAAGACGGTGAGCCAGAATATC
CAATTTCTACATTCGTGCCTCGGAAATCAGCCCCGCCACCCAGGGCCTCGCCGCTGCCCGTACT
GAACTGGGCCAATAGAGAGGAGGTTTGGAAAATCATGTTAAACAAGGAAGAGACATACATACGC
GATGAGCACTTTTTGCAGCGACATCCTCTTCTACAGCCTAAAATGCGAGCAATTCTTCTGGATT
GGTTAATGGAGGTGTGTGAAGTCTATAAACTTCACAGGGAGACATTTTACTTGGCACAAGATTT
CTTTGATCGGTATATGGCAACACAAGAAAATATTGTAAAAACACTTTTACAGCTTATCGGGATT
TCATCTTTATTTATTGCTGCCAAACTTGAGGAAATCTATCCTCCCAAGTTGCACCAGTTTGCTT
ACGTTACGGATGGGGCTTGCTCAGGAGATGAAATTCTCACCATGGAATTAGTGATTATGCAGGC
TCTGAAGTGGCGTTTAAGTCCCCTGACCATTGTGTCCTGGCTGAATGTGTACATGCAGGTTGCA
TATCTGAACGACGTGTATGAAGTGCTGCTGCCGCAGTATCCGCAGCACATCTTTATACAGGTCG
CAGAGCTTTTAGATCTCTGTGTTCTGGATGTTGGCTGCTTAGAATTTCCTTATGGTGTCCTTGC
TGCTTCTGCCTTATATCATTTCACTTCATCTGAAATGATGCAGAAAGTTTCAGGGTATCAGTGG
TGCGATATAGAGAAGTGTGTCAAATGGATGATTCCATTTGCCATGGTTATAAGGGAGGCAGGAA
ATTCCAAAGTAAAGCACTTCCGGGGAGTGCCTATTGAAGATTCCCACAACATACAGACTCACAT
CAACAGCTTGGATTTGCTGGACAAAGCCCAAGCAAAGAAAGCCATATTGTTGGAAGAGAGTAGG
CTTTCTCCTGTCCCATCCGGAGTGCTTACCCCGCCGCAGAGCAGTAAGAAGCAGAGCAGTGAGC
CAGACACGGCGTGACCACACCAGCCTTCTCCGCCACAGACAGTTGTGTGGAAGTGCCTGCCCCT
CGCTCTCTGTGTGCTGCAGCGGAGGCCTGTGCTAGCTTTTACAGATATTTAAGTGGAAGAGTGT
CTCTCCTGTGACAAGTTTTTCTGTGGATGGCTTTGGACAGGGAGAAATATTTTTATTAAATGCT
TAGTTTTTTTAAATAAGTGGGTCAAGTACACCAGCCACCTCCCGAACACCAACGCGTGCTCCAG
ATGCTGCTAAGGAAGGTGATACTTGGCTTGATCAACTTCACAGAAATGAGAAAGGCTTCGAGTG
GAGGAGCGCCCGTGCTTCGCTGATCTCCACGCGGGTGCTCTGAGTTGCGTGGTGTTGGGTGACG
CACGCGGTCAAGCCCTCACTGGGGTGCAGAGCCCACGACAGCGGGGCAGGGCTGCACTTCAGAC
ACTGTCATCGGCAGTGGACCATGCCTTTCATGAACTCTTGCAAGTGCTGCTATATCTATCCCTG
TTGAATAAAGATAATACTGTCTTTGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005400163	(Get FASTA)	NCBI Sequence Viewer
	XP_005400164	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000023623
	ENSCLAP00000023623.1
	ENSCLAP00000023624
	ENSCLAP00000023624.1

RefSeq Acc Id:	XP_005400164 ⟸ XM_005400107
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2YU70 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPRERKERDAKEQDTMKEEGGTDVSVRSRKRKANVAVFLQDPDEEVAKIDRTSRGQCGSQSCDN NTVCANPSLMPTPAKEDGEPEYPISTFVPRKSAPPPRASPLPVLNWANREEVWKIMLNKEETYI RDEHFLQRHPLLQPKMRAILLDWLMEVCEVYKLHRETFYLAQDFFDRYMATQENIVKTLLQLIG ISSLFIAAKLEEIYPPKLHQFAYVTDGACSGDEILTMELVIMQALKWRLSPLTIVSWLNVYMQV AYLNDVYEVLLPQYPQHIFIQVAELLDLCVLDVGCLEFPYGVLAASALYHFTSSEMMQKVSGYQ WCDIEKCVKWMIPFAMVIREAGNSKVKHFRGVPIEDSHNIQTHINSLDLLDKAQAKKAILLEES RLSPVPSGVLTPPQSSKKQSSEPDTA hide sequence

RefSeq Acc Id:	XP_005400163 ⟸ XM_005400106
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2YU75 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPRERKERDAKEQDTMKEEGGTDVSVRSRKRKANVAVFLQDPDEEVAKIDRTSRGQCGSQARKR RPGDHSLSCDNNTVCANPSLMPTPAKEDGEPEYPISTFVPRKSAPPPRASPLPVLNWANREEVW KIMLNKEETYIRDEHFLQRHPLLQPKMRAILLDWLMEVCEVYKLHRETFYLAQDFFDRYMATQE NIVKTLLQLIGISSLFIAAKLEEIYPPKLHQFAYVTDGACSGDEILTMELVIMQALKWRLSPLT IVSWLNVYMQVAYLNDVYEVLLPQYPQHIFIQVAELLDLCVLDVGCLEFPYGVLAASALYHFTS SEMMQKVSGYQWCDIEKCVKWMIPFAMVIREAGNSKVKHFRGVPIEDSHNIQTHINSLDLLDKA QAKKAILLEESRLSPVPSGVLTPPQSSKKQSSEPDTA hide sequence

Ensembl Acc Id:

ENSCLAP00000023623 ⟸ ENSCLAT00000023847

Ensembl Acc Id:

ENSCLAP00000023624 ⟸ ENSCLAT00000023848

Protein Domains

Cyclin C-terminal Cyclin-like

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000016202	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000023847	ENTREZGENE
	ENSCLAT00000023847.1	UniProtKB/TrEMBL
	ENSCLAT00000023848	ENTREZGENE
	ENSCLAT00000023848.1	UniProtKB/TrEMBL
Gene3D-CATH	Cyclin-like	UniProtKB/TrEMBL
InterPro	Cyclin	UniProtKB/TrEMBL
	Cyclin-like	UniProtKB/TrEMBL
	Cyclin-like_sf	UniProtKB/TrEMBL
	Cyclin_A/B-like	UniProtKB/TrEMBL
	Cyclin_C-dom	UniProtKB/TrEMBL
	Cyclin_N	UniProtKB/TrEMBL
	Cyclins_cyclin-box	UniProtKB/TrEMBL
NCBI Gene	Ccne1	ENTREZGENE
PANTHER	PTHR10177	UniProtKB/TrEMBL
	PTHR10177:SF71	UniProtKB/TrEMBL
Pfam	Cyclin_C	UniProtKB/TrEMBL
	Cyclin_N	UniProtKB/TrEMBL
PIRSF	Cyclin_A_B_D_E	UniProtKB/TrEMBL
PROSITE	CYCLINS	UniProtKB/TrEMBL
SMART	CYCLIN	UniProtKB/TrEMBL
	Cyclin_C	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47954	UniProtKB/TrEMBL
UniProt	A0A8C2YU70	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2YU75	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - PID (archival)

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Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - PID (archival)