Cbln2 (cerebellin 2 precursor) - Rat Genome Database
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Gene: Cbln2 (cerebellin 2 precursor) Chinchilla lanigera
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Symbol: Cbln2
Name: cerebellin 2 precursor
RGD ID: 8764891
Description: INVOLVED IN maintenance of synapse structure (ortholog); positive regulation of synapse assembly (ortholog); regulation of presynapse assembly (ortholog); ASSOCIATED WITH chromosome 18q deletion syndrome (ortholog); intestinal volvulus (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN extracellular space (ortholog); glutamatergic synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: cerebellin-2
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540256,051,496 - 56,062,190 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540256,052,340 - 56,062,190 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References


Genomics

Comparative Map Data
Cbln2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540256,051,496 - 56,062,190 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540256,052,340 - 56,062,190 (-)NCBIChiLan1.0ChiLan1.0
CBLN2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1872,536,680 - 72,638,521 (-)EnsemblGRCh38hg38GRCh38
GRCh381872,533,720 - 72,638,485 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371870,203,916 - 70,211,577 (-)NCBIGRCh37GRCh37hg19GRCh37
GRCh371870,203,915 - 70,211,723 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361868,354,895 - 68,362,542 (-)NCBINCBI36hg18NCBI36
Celera1867,055,763 - 67,063,568 (-)NCBI
Cytogenetic Map18q22.3NCBI
HuRef1866,922,467 - 66,930,272 (-)NCBIHuRef
CHM1_11870,199,133 - 70,206,942 (-)NCBICHM1_1
Cbln2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391886,727,226 - 86,736,410 (+)NCBIGRCm39mm39
GRCm381886,711,061 - 86,718,283 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1886,711,110 - 86,718,283 (+)EnsemblGRCm38mm10GRCm38
MGSCv371886,882,440 - 86,887,675 (+)NCBIGRCm37mm9NCBIm37
MGSCv361886,847,241 - 86,852,476 (+)NCBImm8
Celera1887,741,193 - 87,746,432 (+)NCBICelera
Cytogenetic Map18E4NCBI
cM Map1858.63NCBI
Cbln2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21879,940,412 - 79,948,766 (+)NCBI
Rnor_6.0 Ensembl1883,777,665 - 83,782,930 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01883,775,568 - 83,783,841 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01882,836,552 - 82,844,974 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41883,306,945 - 83,313,398 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11883,380,394 - 83,386,848 (+)NCBI
Celera1878,526,129 - 78,532,582 (+)NCBICelera
Cytogenetic Map18q13NCBI
CBLN2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11869,196,248 - 69,201,563 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v01865,906,154 - 66,010,195 (-)NCBIMhudiblu_PPA_v0panPan3
CBLN2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl16,376,777 - 6,382,024 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.116,378,153 - 6,384,559 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Cbln2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936756567,906 - 576,276 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CBLN2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1150,973,622 - 150,980,757 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11150,966,003 - 150,980,757 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21167,191,334 - 167,198,494 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CBLN2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1187,270,551 - 7,280,233 (+)NCBI
ChlSab1.1 Ensembl187,274,754 - 7,278,714 (+)Ensembl
Cbln2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248068,371,966 - 8,381,908 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000010979   ⟹   ENSCLAP00000010845
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495540256,051,496 - 56,062,190 (-)Ensembl
RefSeq Acc Id: XM_005373058   ⟹   XP_005373115
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540256,052,340 - 56,061,288 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005373059   ⟹   XP_005373116
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540256,052,340 - 56,062,190 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005373060   ⟹   XP_005373117
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540256,052,340 - 56,062,190 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005373061   ⟹   XP_005373118
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540256,052,340 - 56,062,190 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005373062   ⟹   XP_005373119
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540256,052,340 - 56,060,913 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013511355   ⟹   XP_013366809
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540256,052,340 - 56,062,190 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_005373118   ⟸   XM_005373061
- Sequence:
RefSeq Acc Id: XP_005373117   ⟸   XM_005373060
- Sequence:
RefSeq Acc Id: XP_005373115   ⟸   XM_005373058
- Sequence:
RefSeq Acc Id: XP_005373116   ⟸   XM_005373059
- Sequence:
RefSeq Acc Id: XP_005373119   ⟸   XM_005373062
- Sequence:
RefSeq Acc Id: XP_013366809   ⟸   XM_013511355
- Sequence:
RefSeq Acc Id: ENSCLAP00000010845   ⟸   ENSCLAT00000010979


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000007487 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000010845 ENTREZGENE
Ensembl Transcript ENSCLAT00000010979 ENTREZGENE
NCBI Gene Cbln2 ENTREZGENE