Fgf3 (fibroblast growth factor 3) - Rat Genome Database

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Gene: Fgf3 (fibroblast growth factor 3) Chinchilla lanigera
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Symbol: Fgf3
Name: fibroblast growth factor 3
RGD ID: 8764487
Description: INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); negative regulation of cardiac muscle tissue development (ortholog); organ induction (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); Breast Neoplasms (ortholog); cleft lip (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542216,333,363 - 16,339,853 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542216,333,363 - 16,339,853 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References


Genomics

Comparative Map Data
Fgf3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542216,333,363 - 16,339,853 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542216,333,363 - 16,339,853 (+)NCBIChiLan1.0ChiLan1.0
FGF3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1169,809,968 - 69,819,416 (-)EnsemblGRCh38hg38GRCh38
GRCh381169,809,968 - 69,819,416 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371169,624,736 - 69,634,184 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361169,333,917 - 69,343,129 (-)NCBINCBI36hg18NCBI36
Build 341169,333,916 - 69,343,129NCBI
Celera1166,921,757 - 66,931,244 (-)NCBI
Cytogenetic Map11q13.3NCBI
HuRef1165,917,066 - 65,926,354 (-)NCBIHuRef
CHM1_11169,507,656 - 69,517,018 (-)NCBICHM1_1
Fgf3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397144,392,349 - 144,397,085 (+)NCBIGRCm39mm39
GRCm39 Ensembl7144,391,820 - 144,398,173 (+)Ensembl
GRCm387144,838,612 - 144,843,348 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7144,838,083 - 144,844,436 (+)EnsemblGRCm38mm10GRCm38
MGSCv377152,024,517 - 152,029,253 (+)NCBIGRCm37mm9NCBIm37
MGSCv367144,648,098 - 144,652,378 (+)NCBImm8
Celera7144,602,541 - 144,607,277 (+)NCBICelera
Cytogenetic Map7F5NCBI
cM Map788.85NCBI
Fgf3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21200,001,261 - 200,005,187 (+)NCBImRatBN7.2
Rnor_6.0 Ensembl1218,003,018 - 218,006,942 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01218,003,018 - 218,006,942 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01224,872,403 - 224,876,327 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41205,269,480 - 205,273,404 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11205,422,932 - 205,426,857 (+)NCBI
Celera1197,559,343 - 197,563,267 (+)NCBICelera
Cytogenetic Map1q42NCBI
FGF3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11168,197,962 - 68,207,036 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1168,197,962 - 68,207,042 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01164,905,658 - 64,915,175 (-)NCBIMhudiblu_PPA_v0panPan3
FGF3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11848,382,819 - 48,388,453 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1848,383,222 - 48,389,009 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1846,990,863 - 46,998,466 (+)NCBI
ROS_Cfam_1.01849,057,796 - 49,065,400 (+)NCBI
UMICH_Zoey_3.11848,504,675 - 48,512,248 (+)NCBI
UNSW_CanFamBas_1.01848,091,070 - 48,098,649 (+)NCBI
UU_Cfam_GSD_1.01848,836,772 - 48,844,382 (+)NCBI
Fgf3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049474,426,011 - 4,433,296 (+)NCBI
SpeTri2.0NW_004936599868,634 - 875,464 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FGF3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl23,489,208 - 3,496,532 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.123,489,208 - 3,496,532 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.221,966,360 - 1,973,649 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FGF3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.114,746,195 - 4,755,654 (+)NCBI
ChlSab1.1 Ensembl14,746,696 - 4,754,924 (+)Ensembl
Vero_WHO_p1.0NW_023666038102,019,934 - 102,028,917 (+)NCBI
Fgf3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476717,353,989 - 17,360,857 (+)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005384959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AGCD01022895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCLAT00000023546   ⟹   ENSCLAP00000023325
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495542216,333,363 - 16,339,853 (+)Ensembl
RefSeq Acc Id: XM_005384959   ⟹   XP_005385016
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542216,333,363 - 16,339,853 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005385016 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005385016   ⟸   XM_005384959
- Sequence:
RefSeq Acc Id: ENSCLAP00000023325   ⟸   ENSCLAT00000023546


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000015995 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000023325 ENTREZGENE
Ensembl Transcript ENSCLAT00000023546 ENTREZGENE
NCBI Gene Fgf3 ENTREZGENE