| Gene: Arhgap36 (Rho GTPase activating protein 36) Chinchilla lanigera |
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Analyze |
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| Symbol: |
Arhgap36 |
| Name: |
Rho GTPase activating protein 36 |
| RGD ID: |
8764140 |
| Description: |
ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); syndromic X-linked intellectual disability Lubs type (ortholog) |
| Type: |
protein-coding
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| RefSeq Status: |
MODEL |
| Previously known as: |
rho GTPase-activating protein 36 |
| RGD Orthologs |
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| Alliance Genes |
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| More Info |
more info ...
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| More Info |
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| Latest Assembly: |
ChiLan1.0 - Chinchilla ChiLan1.0 Assembly |
| Position: |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955473 | 3,915,828 - 3,945,625 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955473 | 3,914,769 - 3,922,938 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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| JBrowse: |
View Region in Genome Browser (JBrowse)
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| Model |
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Imported Disease Annotations - ClinVar
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References
Additional References at PubMed
Genomics
Comparative Map Data
Arhgap36
(Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955473 | 3,915,828 - 3,945,625 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955473 | 3,914,769 - 3,922,938 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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ARHGAP36
(Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | X | 131,058,346 - 131,089,885 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 131,058,346 - 131,089,885 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | X | 130,192,320 - 130,223,859 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | X | 130,019,897 - 130,051,534 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | X | 130,578,656 - 130,610,299 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q26.1 | NCBI | | | | | HuRef | X | 119,585,675 - 119,616,405 (+) | NCBI | | HuRef | | | CHM1_1 | X | 130,103,907 - 130,135,516 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 129,378,162 - 129,409,672 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Arhgap36
(Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | X | 48,537,237 - 48,589,121 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | X | 48,552,822 - 48,589,121 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | X | 49,448,360 - 49,500,244 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | X | 49,463,945 - 49,500,244 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | X | 46,823,627 - 46,853,427 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | X | 45,715,077 - 45,744,877 (+) | NCBI | | MGSCv36 | mm8 | | Celera | X | 36,935,292 - 36,965,492 (+) | NCBI | | Celera | | | Cytogenetic Map | X | A5 | NCBI | | | | | cM Map | X | 25.95 | NCBI | | | | |
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Arhgap36
(Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | X | 133,635,996 - 133,664,995 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | X | 128,780,148 - 128,787,169 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | X | 128,751,900 - 128,787,161 (+) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | X | 136,460,227 - 136,495,646 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 136,460,215 - 136,495,646 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | X | 136,531,392 - 136,560,308 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | X | 135,979,352 - 136,007,067 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | X | 127,686,135 - 127,721,538 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q36 | NCBI | | | | |
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ARHGAP36
(Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | X | 130,483,395 - 130,514,910 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | X | 130,487,004 - 130,518,524 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | X | 120,204,098 - 120,221,064 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | X | 130,505,137 - 130,536,521 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | X | 130,505,137 - 130,536,556 (+) | Ensembl | panpan1.1 | | panPan2 | |
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ARHGAP36
(Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | X | 102,175,486 - 102,227,607 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | X | 102,196,331 - 102,227,602 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | X | 88,370,546 - 88,401,920 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | X | 104,052,717 - 104,084,084 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | X | 104,052,846 - 104,084,085 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | X | 101,467,674 - 101,499,044 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | X | 103,316,379 - 103,347,730 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | X | 103,095,119 - 103,126,491 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Arhgap36
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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ARHGAP36
(Sus scrofa - pig) |
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ARHGAP36
(Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | X | 106,300,640 - 106,332,161 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | X | 106,323,850 - 106,332,186 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666065 | 43,722,135 - 43,753,630 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Arhgap36
(Heterocephalus glaber - naked mole-rat) |
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Expression
Sequence
| RefSeq Acc Id: |
ENSCLAT00000001221 ⟹ ENSCLAP00000001180 |
| Type: |
CODING |
| Position: |
| Chinchilla Assembly | Chr | Position (strand) | Source |
|---|
ChiLan1.0 Ensembl | NW_004955473 | 3,915,828 - 3,945,625 (-) | Ensembl |
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| RefSeq Acc Id: |
XM_013523052 ⟹ XP_013378506 |
| Type: |
CODING |
| Position: |
| Chinchilla Assembly | Chr | Position (strand) | Source |
|---|
ChiLan1.0 | NW_004955473 | 3,914,769 - 3,922,938 (-) | NCBI |
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| Sequence: |
ATGGGTGGCTGCATTCCTTTTCTGAAGGCAGCAAGGACATTGTGCCCCAGAATCATGCCCCTTT
TGCTGTTGTTGTCTGCCTTCATTTTTTTAGTGAGCGTCCTGGGAGGAGCCCCAGGACACAACCC
AGACCACAAGATGAAGATGGTATCAATACACAGCCTCTCCGAGCTAGAGCGTCTGAAGCTGCAA
GAGACTGCTTACCAAGAACTCCTGGCCAGGCATTTCCTCTCTGAATTCGAGCCTAACCGAGCTC
TAACCACTGACAGCCCAGACACCTCGGAGAACTGTTTTCTGGTCTTAAGAGGACAAGACAGAGC
CGTGTCATCATTCAAGACGTTTGGTGTTCGCCTGGAAGAGGTGCTGGTGAATGAGTTTACCCGC
CGCAAGCATCTTGAACTAAGAGCCGAGATGCAGGTTGAAGAAGCTACGGGTCAGCCTTCGGGCC
GTCGTCGTCGTCGGGGAAACGTAGTGCAAAGGCTGTTTGGTCGCATCCGGCGCTTTTTCACTCG
CCCTAGGAATGAGCCTACTTTGCCCAGGGAGTTCACTCGCCGTGGGCGTCGAGGTGCTGTGTCT
GTGGATAGCTTGGCTGAGCTGGAGGACGGAGCCCTGTTGCTTCAGACCCTGCAACTGTCAAGGG
TTTCATTTCCTATTGGCCAGAGGCTTTTGGGATCTAAAAGGGAGATGAGCCTCAACCCCATTGC
ACAGCAAATCCCCCAGGTTGTTGAAACTTGCTGCAAGTTCATTGAGGAACATGGTTTAAGTGCA
GTGGGGATTTTCACCATTGAGCACTCTGCACAGAAAGTGCGTCAGCTCCGTGAAAAATTTGATC
AAGGTCTGGATGTAGTGCTGGATGACAGTCAGAATGTGCACGATGTGGCTGCACTTCTCAAGGA
GTTTTTCCGTGACATGAAGGACTCTCTGCTGCCAGATGATCTGTACATGTCCTTCCTCCTGACA
GCAACTCTGAAGCCACAGGATCAGCTTTCTGCCCTGCAGTTGCTGGTCTACCTGATGCCACCCT
GCCACAGTGACACCCTGGAGCGTCTGCTGAAGGCCCTGCATAAAATCACTGAGCACTGCGAGGA
CTCTATTGGCACTGATGGACAGTTGGTTGCAGGCAACCGCATGACTTCCACCAACTTGGCCCTG
GTGTTTGGATCTGCTCTCCTGAAGAGGGGAAAGTCTGGCAAGAAAGAGTCCAGGAAGGCTCAAG
TGGGAATTGACCACTATGTTGCTTCTGTCAATGTGGTCCGTGCCATGATTGATAACTGGGATGT
CCTCTTCCAGGTGCCTCCTCATATTCAGAAGCAGGTTGCTAAGCGTGTGTGGAAATCCAGTCCT
GAGGCTCTTGATTTTATCAGACGCAGGAATCTGAGGAAGATCCAGAGTGCGCGCATAAAGATGG
AAGAGGACGCTCTGCTTTCTGATCCAGTGGAATCCTCTGCTGAGGCCCGAGCGGCTATCCTTGG
TCAAAGCAGTCCCTTTGATGAAGACCCTGAAGGAGTTCCAGATCTGCAAGAACTCTTCAACCCC
GATGAAAATCTGGACAGCGACTTTGAAGATTTTGAAGATGACCCGAATATTGACCTTGCAGAAG
TTCCTTATCTTGACGTAGTCCCAAACAATGAAAACGCCTCTGATACAGATGAAATCCCAGGTTC
CTCTGAGGATCCAGCTGTGCCTTCTGGCACTGCCCGTTCCCATGATGATGAGGAGGGAGCGGGT
AACCCCCCCATTCCGGAGCAAGGCCGCCCATTGCTTCGTGTGCCCCAGGAGAAGGAAGCCAACA
CTGGCACTGGCTACTTCTTTCCCTAGATGTTTTTCCTTCTATAAGGTGTCAGACAGGGGAAAAG
GGTGGGGTAGACTTGGAATGTCACAGGAAACATTTAAGAGAAACTTAAGGACACACATCTGAGG
GTAAGAAGGAGTTCCCCCTGATGCTCGGGTCAGGATAGGAATTCCAAACACAATGCCAGCCCCT
TTACTGGGGATGCTTGGTCTCTTCAGCTGGTAAAAAGAGCTATTTCTGTGTCATGTCCGGGCAC
CCTGGTGCTACCTTGCAATCGCTTTCCCCCTGATCTGGCTTTCTTTTGCTACAGTCCTTTCTTT
AATTGATGTTACATTTGTGGTGGACACCTGTCCCAGAGAAGCTCACAAATCTCGAGGTGCTTTC
CCTCTCCCAAAAAGGATTGCATGCTATTCCTGACTTTCCTACCCTCCTCCTGAGAGTTTAATTG
GAAAGGCCCTCAAGAGGCATGCTAGAATGTTAGGTCAGCCTACTGACAGCTGACAAACAACTAA
TGCTAAACCATGTCACACCAACTCATAGCCGTGTCCCCGCAGCCGTGTCTGCCGCCTCAGGATT
TTTTTTCCAAATTATTTAGACCAATGGCTCGTCAAACAGCCACTCCCCAAATTCTGTGCAGGTT
TGCTCAGGACAAGCAAACAGGAAAACCTCAAGTATAAGTCTAACTAGCTTTTCTGGGATCAATC
AAAAGTTAGGGGATAAAATTAGATTTTAGTACCTGAATTTGTTTTAAAGATGGCTGATGTTCAC
TACAGTTGTCTATAAAACAGCTAGTTAGATACAGGCACAATAGTTCCAAGTAGCTAAAGTCACC
CGATTAAAACTATTCTTATCTATCGTCTCTGTAGTTCCTCTATGCAGGACGGTACAAATTTGCG
GGACATGCTCTGGTAACACACACATATGGGTTACGTATGACATCCAAATTACAGCTGATATTGA
TGGGTAACAACTGCTAAGATCCATAGAATGAAGAATGCATTGTATTGAGGGATAGACATTGATC
ACATGATGGGTAACAACCGCAGAGCTCGAAGATTTGTGATTGTTAAAACTTCTCTGGCATT
hide sequence
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| RefSeq Acc Id: |
XP_013378506 ⟸ XM_013523052 |
| - UniProtKB: |
A0A8C2UKR9 (UniProtKB/TrEMBL) |
| - Sequence: |
MGGCIPFLKAARTLCPRIMPLLLLLSAFIFLVSVLGGAPGHNPDHKMKMVSIHSLSELERLKLQ
ETAYQELLARHFLSEFEPNRALTTDSPDTSENCFLVLRGQDRAVSSFKTFGVRLEEVLVNEFTR
RKHLELRAEMQVEEATGQPSGRRRRRGNVVQRLFGRIRRFFTRPRNEPTLPREFTRRGRRGAVS
VDSLAELEDGALLLQTLQLSRVSFPIGQRLLGSKREMSLNPIAQQIPQVVETCCKFIEEHGLSA
VGIFTIEHSAQKVRQLREKFDQGLDVVLDDSQNVHDVAALLKEFFRDMKDSLLPDDLYMSFLLT
ATLKPQDQLSALQLLVYLMPPCHSDTLERLLKALHKITEHCEDSIGTDGQLVAGNRMTSTNLAL
VFGSALLKRGKSGKKESRKAQVGIDHYVASVNVVRAMIDNWDVLFQVPPHIQKQVAKRVWKSSP
EALDFIRRRNLRKIQSARIKMEEDALLSDPVESSAEARAAILGQSSPFDEDPEGVPDLQELFNP
DENLDSDFEDFEDDPNIDLAEVPYLDVVPNNENASDTDEIPGSSEDPAVPSGTARSHDDEEGAG
NPPIPEQGRPLLRVPQEKEANTGTGYFFP
hide sequence
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| RefSeq Acc Id: |
ENSCLAP00000001180 ⟸ ENSCLAT00000001221 |
Additional Information
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