Stard4 (StAR related lipid transfer domain containing 4) - Rat Genome Database
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Gene: Stard4 (StAR related lipid transfer domain containing 4) Chinchilla lanigera
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Symbol: Stard4
Name: StAR related lipid transfer domain containing 4
RGD ID: 8763831
Description: ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN cholesterol esterification (ortholog); cholesterol import (ortholog); cholesterol transport involved in cholesterol storage (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: StAR-related lipid transfer (START) domain containing 4; stAR-related lipid transfer protein 4
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554183,638,399 - 3,648,402 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554183,637,390 - 3,652,054 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References


Genomics

Comparative Map Data
Stard4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554183,638,399 - 3,648,402 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554183,637,390 - 3,652,054 (+)NCBIChiLan1.0ChiLan1.0
STARD4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl5111,496,033 - 111,512,590 (-)EnsemblGRCh38hg38GRCh38
GRCh385111,491,422 - 111,512,567 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh375110,831,731 - 110,848,233 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365110,861,921 - 110,876,056 (-)NCBINCBI36hg18NCBI36
Build 345110,861,920 - 110,876,056NCBI
Celera5106,779,623 - 106,793,758 (-)NCBI
Cytogenetic Map5q22.1NCBI
HuRef5106,012,693 - 106,026,827 (-)NCBIHuRef
CHM1_15110,265,025 - 110,281,589 (-)NCBICHM1_1
Stard4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391833,332,191 - 33,346,937 (-)NCBIGRCm39mm39
GRCm39 Ensembl1833,332,408 - 33,346,915 (-)Ensembl
GRCm381833,199,138 - 33,213,862 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1833,199,355 - 33,213,862 (-)EnsemblGRCm38mm10GRCm38
MGSCv371833,361,075 - 33,373,470 (-)NCBIGRCm37mm9NCBIm37
MGSCv361833,326,232 - 33,338,627 (-)NCBImm8
Celera1833,649,468 - 33,662,093 (-)NCBICelera
Cytogenetic Map18B1NCBI
cM Map1818.18NCBI
Stard4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21824,814,683 - 24,830,024 (-)NCBI
Rnor_6.0 Ensembl1825,984,638 - 25,997,555 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01825,982,210 - 25,997,555 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01825,699,344 - 25,712,261 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41825,638,433 - 25,653,958 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11825,669,531 - 25,740,871 (-)NCBI
Celera1824,564,822 - 24,577,739 (-)NCBICelera
Cytogenetic Map18p12NCBI
STARD4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.15112,658,743 - 112,675,165 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5112,657,516 - 112,675,165 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v05106,855,990 - 106,873,384 (-)NCBIMhudiblu_PPA_v0panPan3
STARD4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl31,154,358 - 1,170,469 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.131,154,358 - 1,171,248 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Stard4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365315,865,840 - 5,877,591 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
STARD4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2116,235,816 - 116,257,041 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12116,235,821 - 116,257,143 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22120,830,521 - 120,845,745 (-)NCBISscrofa10.2Sscrofa10.2susScr3
STARD4
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12314,842,152 - 14,854,675 (-)NCBI
ChlSab1.1 Ensembl2314,842,286 - 14,854,702 (-)Ensembl
Stard4
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474329,278,327 - 29,298,050 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000008079   ⟹   ENSCLAP00000007959
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554183,638,399 - 3,648,402 (+)Ensembl
RefSeq Acc Id: XM_005382163   ⟹   XP_005382220
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554183,637,409 - 3,652,054 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005382165   ⟹   XP_005382222
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554183,637,390 - 3,652,054 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013513071   ⟹   XP_013368525
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554183,637,426 - 3,652,054 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005382220 (Get FASTA)   NCBI Sequence Viewer  
  XP_005382222 (Get FASTA)   NCBI Sequence Viewer  
  XP_013368525 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005382220   ⟸   XM_005382163
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005382222   ⟸   XM_005382165
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_013368525   ⟸   XM_013513071
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: ENSCLAP00000007959   ⟸   ENSCLAT00000008079


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000005584 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000007959 ENTREZGENE
Ensembl Transcript ENSCLAT00000008079 ENTREZGENE
NCBI Gene Stard4 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-16 Stard4  StAR related lipid transfer domain containing 4    StAR-related lipid transfer (START) domain containing 4  Symbol and/or name change 5135510 APPROVED