Dnaaf4 (dynein axonemal assembly factor 4)

Gene: Dnaaf4 (dynein axonemal assembly factor 4) Chinchilla lanigera

Analyze

Symbol:

Dnaaf4

Name:

dynein axonemal assembly factor 4

RGD ID:

8760533

Description:

ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); INVOLVED IN cilium movement (ortholog); determination of left/right symmetry (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH Bloom syndrome (ortholog); colorectal cancer (ortholog); dyslexia (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

dyslexia susceptibility 1 candidate 1; dyslexia susceptibility 1 candidate gene 1 protein homolog; Dyx1c1

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

NCBI Annotation Information:

Annotation category: partial on reference assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955409	498,450 - 523,067 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Bloom syndrome (ISO)

colorectal cancer (ISO)

dyslexia (ISO)

genetic disease (ISO)

Griscelli syndrome type 2 (ISO)

Kartagener syndrome (ISO)

male infertility (ISO)

primary ciliary dyskinesia (ISO)

primary ciliary dyskinesia 25 (ISO)

Robinow syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cilium movement (ISO)

determination of left/right symmetry (ISO)

epithelial cilium movement involved in extracellular fluid movement (ISO)

establishment of localization in cell (ISO)

heart development (ISO)

inner dynein arm assembly (ISO)

learning or memory (ISO)

neuron migration (ISO)

outer dynein arm assembly (ISO)

regulation of intracellular estrogen receptor signaling pathway (ISO)

regulation of proteasomal protein catabolic process (ISO)

Cellular Component

centrosome (ISO)

cytoplasm (ISO)

cytosol (ISO)

non-motile cilium (ISO)

nucleus (ISO)

plasma membrane (ISO)

Molecular Function

nuclear estrogen receptor binding (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Dnaaf4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955409	498,450 - 523,067 (+)	NCBI	ChiLan1.0	ChiLan1.0

DNAAF4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	55,417,755 - 55,508,234 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	55,410,525 - 55,508,234 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	55,709,953 - 55,800,432 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	53,497,245 - 53,587,724 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	15	53,509,797 - 53,587,724	NCBI
Celera	15	32,598,522 - 32,689,024 (-)	NCBI		Celera
Cytogenetic Map	15	q21.3	NCBI
HuRef	15	32,534,595 - 32,624,730 (-)	NCBI		HuRef
CHM1_1	15	55,828,490 - 55,918,875 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	15	53,220,992 - 53,311,451 (-)	NCBI		T2T-CHM13v2.0

Dnaaf4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	72,863,574 - 72,880,971 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	72,866,067 - 72,880,346 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	72,957,372 - 72,973,689 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	72,958,785 - 72,973,064 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	72,806,592 - 72,820,874 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	72,755,972 - 72,770,196 (+)	NCBI		MGSCv36	mm8
Celera	9	70,144,716 - 70,159,026 (+)	NCBI		Celera
Cytogenetic Map	9	D	NCBI
cM Map	9	40.08	NCBI

Dnaaf4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	82,577,044 - 82,601,653 (+)	NCBI		GRCr8
mRatBN7.2	8	73,696,394 - 73,711,315 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	73,698,103 - 73,711,292 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	79,221,451 - 79,234,648 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	77,494,064 - 77,507,259 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	75,331,425 - 75,344,622 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	79,637,678 - 79,651,892 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	79,638,696 - 79,651,884 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	73,438,090 - 73,451,862 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	77,702,354 - 77,715,547 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	8	68,043,581 - 68,056,319 (-)	NCBI		Celera
Cytogenetic Map	8	q24	NCBI

DNAAF4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	44,673,412 - 44,762,123 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	48,833,257 - 48,947,299 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	34,382,064 - 34,469,432 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	52,711,349 - 52,800,598 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	52,711,349 - 52,791,281 (-)	Ensembl	panpan1.1		panPan2

DNAAF4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	30	20,778,497 - 20,871,304 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	30	20,815,775 - 20,871,220 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	30	20,761,481 - 20,835,741 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	30	20,946,345 - 21,021,204 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	30	20,965,025 - 21,021,128 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	30	20,889,909 - 20,964,372 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	30	20,974,146 - 21,048,301 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	30	21,105,811 - 21,180,367 (-)	NCBI		UU_Cfam_GSD_1.0

Dnaaf4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	99,063,503 - 99,112,487 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	16,912,155 - 16,960,468 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	16,911,575 - 16,960,521 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DNAAF4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	116,332,630 - 116,430,984 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	116,331,217 - 116,431,673 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	128,818,968 - 128,896,973 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DNAAF4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	27,946,092 - 28,024,495 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666048	113,257,359 - 113,328,014 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dnaaf4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624731	6,215,737 - 6,241,793 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624731	6,215,798 - 6,270,210 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013510266	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013510267	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013510268	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013510269	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013510270	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01009153	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01009154	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBBH01166208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01157322	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_013510266 ⟹ XP_013365720

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955409	498,450 - 522,295 (+)	NCBI

Sequence:

show sequence

TGTAAAAATTTTAAGGTCAGATAAATTGCTAAAGATTTGAACTGCTGACTGGATGAACGGAAGA
CTGTCTCCACACGGAACGTTTGGTTGGTGTTAACGAAGGCAGCGAAGGAGGCCTCCTCACCTCA
GCGCCCTCGACCTTGCGCCTGCTCCGACCACGGAGTCCACCAGCAGTGCAGGCGCTCCGCGGGG
ACACGCGGGCCCGCAGGCGCGGCCGGCCCAGCCACCCCTCGCGTGTCCCTGGCCAGTGTTAGGT
GCCGCGCCAGCATCGCGCGCCATCACCTCCCACCTGCTCCCTCCTCGCACCTCAAGCTGGAAGC
TCGCGTGTCCAGGACACACCGCGCAGCAGAGACGCGCGCAGAGCACGCTGGGAGCTGGGGAGGG
TCTCAGGGTAAAGAGAGGATGCGCAAGGCACGCTGGGAGCCGGGGAGTGCTCACGGGGGACGCG
AGTGTGCGCGGGGCACGCTGGGAGCCAGCGCTGCAGGCTGACCCGGAAGGACTGCTGCGGTCCT
GACACCAGCTTCCCTAGCAACCGAGCGGTTTTGCGCAGCGACCGGCCGGCGGTCCGTCAGCAGA
CTGTGATGCCGCTGCAGCTCAGCGGTTACAGCTGGCGGCAGACGCCCACCACAGTCTTCCTGTC
TCTGCCCCTGCGCGGCGTCTGCGCCAGAGATGCGGACGTGTTCTGCTCGGAGAGTTACCTGAAG
GTCAACTTTCCCCCATATCTATTTGAGGCATTTCTCTATGCTCCCATAGATGATGGGAACAGCA
AAGCAAAGATTGGAAATGATGCTATTGTTTTCACCTTGTATAAGAAAGAAGCAGTCATGTGGGA
GACACTTTCTATATCAGGTGTTGACAAAGAGATGATGCAGAGAATAAGAGAAAAATCTATTTTA
CAAGCACAAGAGAGAGCAAAAGAGGCTGCAGAAGCAAAAGCTACAGCAAGACGGGAAGATCAAA
AGTACGCATTAAATGTCATGATGAAGATTGAAGAAGAAGAGAGGAAAAAAATAGAAGATGTGAA
AGAAAATGAGCGGAGAAAAGCAACTGAAGAACTGGAAGCCTGGAAGGAATGTCAGAGAAACGCT
GGAGGACACGAGGGAGCTCGGAGAGAAGAGGAGGCAGGTCAAAGGGGAAAGCCGGTGGGAGAAA
GAAGAAAGTTAAAGCATCAGAGTCTTCCTGGAAGTTTGACATCTAGACACAGTGCAGCAAAAGG
AAGAGACTGGGGAAGCATATTTCCTGCGGAGCGGGAGGAGGAACGCGTCCCTGCGCCCCGCCCG
GCCGGCAGCATCACGGTCAGCTTCACCCCACGCGTGTTCCCCACGGCGCTGCGCGAGTCCCAGG
CGGCCCTGGAGGAGGAGTGGCTGCACAAGCAGGCCCAGGCACGAAGAGCCGTGAACACGGATGC
TCCTGAATTTGGGGATTTAAAAGAAGAAGAGAAGAACCCAGAGTGGCTGAAGGAAAAAGGAAAC
AAATTGTTTGCAACGGAGAACTACCTGGCCGCGGCTGACGCGTACAGCTTAGCCATCAGACTGA
GCAGCAGGACCCCGGTGCTGTACCTGAACCGGGCCGCGTGCCACCTGAAGCTGAGGAACTTGCA
CAAGGCCATCGAAGATTCTTCAACGGCTTTGGCACTGCTGACCCCGCCGGTTGCAGACAATGCA
GATGCAAGAATGAAAGCTCACCTCCGCCGCGGAGCTGCGTTCTGCCAACTGGAACTGTATGTGG
AGGGCCTGCAGGACTACGATGCTGCGCTTAGGATCGATCCAGCTAACACAGCTGTGCAAAGTGA
TGCTGAGAAGATTCGAAATGTAATTCAAGGAACAGAACTAAAATCACAGTGACCACTGGAAGCA
GCTAATGTAGTACCAAGTATTTGAGGTATTTAGTAACAGGTTTTTAAATTTTTCAAAAATAGGA
GCTGGGTGAGGTGGTACACACTGTGACCTTGTCACTTGGGAGGCTGAAGCAGGAGGAGCTAGAG
TTCCAGACCAACCTGGGCTATGAGATTCTTTCTCAACAAAACAAGCGGAGATGTTCGGAATCTT
TGTACATATATGGGTGATTATGCAGAATCCATGTACTGCTTAGTACTTCAGTTCTGTAAGGGCT
AAACGTTAAACATCTGTAGAAAATTAAGTGTTTGCTTTATATAATTTCCAACAAGAATTACCAT
ATTAAATTTTTTTTTTTTTTGTCT

hide sequence

RefSeq Acc Id:

XM_013510267 ⟹ XP_013365721

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955409	498,450 - 522,347 (+)	NCBI

Sequence:

show sequence

TGTAAAAATTTTAAGGTCAGATAAATTGCTAAAGATTTGAACTGCTGACTGGATGAACGGAAGA
CTGTCTCCACACGGAACGTTTGGTTGGTGTTAACGAAGGCAGCGAAGGAGGCCTCCTCACCTCA
GCGCCCTCGACCTTGCGCCTGCTCCGACCACGGAGTCCACCAGCAGTGCAGGCGCTCCGCGGGG
ACACGCGGGCCCGCAGGCGCGGCCGGCCCAGCCACCCCTCGCGTGTCCCTGGCCAGTGTTAGGT
GCCGCGCCAGCATCGCGCGCCATCACCTCCCACCTGCTCCCTCCTCGCACCTCAAGCTGGAAGC
TCGCGTGTCCAGGACACACCGCGCAGCAGAGACGCGCGCAGAGCACGCTGGGAGCTGGGGAGGG
TCTCAGGGTAAAGAGAGGATGCGCAAGGCACGCTGGGAGCCGGGGAGTGCTCACGGGGGACGCG
AGTGTGCGCGGGGCACGCTGGGAGCCAGCGCTGCAGGCTGACCCGGAAGGACTGCTGCGGTCCT
GACACCAGCTTCCCTAGCAACCGAGCGGTTTTGCGCAGCGACCGGCCGGCGGTCCGTCAGCAGA
CTGTGATGCCGCTGCAGCTCAGCGGTTACAGCTGGCGGCAGACGCCCACCACAGTCTTCCTGTC
TCTGCCCCTGCGCGGCGTCTGCGCCAGAGATGCGGACGTGTTCTGCTCGGAGAGTTACCTGAAG
GTCAACTTTCCCCCATATCTATTTGAGGCATTTCTCTATGCTCCCATAGATGATGGGAACAGCA
AAGCAAAGATTGGAAATGATGCTATTGTTTTCACCTTGTATAAGAAAGAAGCAGTCATGTGGGA
GACACTTTCTATATCAGGTGTTGACAAAGAGATGATGCAGAGAATAAGAGAAAAATCTATTTTA
CAAGCACAAGAGAGAGCAAAAGAGGCTGCAGAAGCAAAAGCTACAGCAAGACGGGAAGATCAAA
AGTACGCATTAAATGTCATGATGAAGATTGAAGAAGAAGAGAGGAAAAAAATAGAAGATGTGAA
AGAAAATGAGCGGAGAAAAGCAACTGAAGAACTGGAAGCCTGGAAGGAATGTCAGAGAAACGCT
GGAGGACACGAGGGAGCTCGGAGAGAAGAGGAGGCAGGTCAAAGGGGAAAGCCGGTGGGAGAAA
GAAGAAAGTTAAAGCATCAGAGTCTTCCTGGAAGTTTGACATCTAGACACAGTGCAGCAAAAGG
AAGAGACTGGGGAAGCATATTTCCTGCGGAGCGGGAGGAGGAACGCGTCCCTGCGCCCCGCCCG
GCCGGCAGCATCACGGTCAGCTTCACCCCACGCGTGTTCCCCACGGCGCTGCGCGAGTCCCAGG
CGGCCCTGGAGGAGGAGTGGCTGCACAAGCAGGCCCAGGCACGAAGAGCCGTGAACACGGATGC
TCCTGAATTTGGGGATTTAAAAGAAGAAGAGAAGAACCCAGAGTGGCTGAAGGAAAAAGGAAAC
AAATTGTTTGCAACGGAGAACTACCTGGCCGCGGCTGACGCGTACAGCTTAGCCATCAGACTGA
GCAGCAGGACCCCGGTGCTGTACCTGAACCGGGCCGCGTGCCACCTGAAGCTGAGGAACTTGCA
CAAGGCCATCGAAGATTCTTCAACGGCTTTGGCACTGCTGACCCCGCCGGTTGCAGACAATGCA
GATGCAAGAATGAAAGCTCACCTCCGCCGCGGAGCTGCGTTCTGCCAACTGGAACTGTATGTGG
AGGGCCTGCAGGACTACGATGCTGCGCTTAGGATCGATCCAGCTAACACAGCTGTGCAAAGTGA
TGCTGAGAAGATTCGAAATGTAATTCAAGGAACAGAACTAAAATCACAGTGACCACTGGAAGCA
GCTAATGTAGTACCAAGTATTTGAGGGTCTCGCTATGCAGTTCAGGCTGGCCTGGAGCTCACTT
TG

hide sequence

RefSeq Acc Id:

XM_013510268 ⟹ XP_013365722

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955409	498,450 - 523,067 (+)	NCBI

Sequence:

show sequence

TGTAAAAATTTTAAGGTCAGATAAATTGCTAAAGATTTGAACTGCTGACTGGATGAACGGAAGA
CTGTCTCCACACGGAACGTTTGGTTGGTGTTAACGAAGGCAGCGAAGGAGGCCTCCTCACCTCA
GCGCCCTCGACCTTGCGCCTGCTCCGACCACGGAGTCCACCAGCAGTGCAGGCGCTCCGCGGGG
ACACGCGGGCCCGCAGGCGCGGCCGGCCCAGCCACCCCTCGCGTGTCCCTGGCCAGTGTTAGGT
GCCGCGCCAGCATCGCGCGCCATCACCTCCCACCTGCTCCCTCCTCGCACCTCAAGCTGGAAGC
TCGCGTGTCCAGGACACACCGCGCAGCAGAGACGCGCGCAGAGCACGCTGGGAGCTGGGGAGGG
TCTCAGGGTAAAGAGAGGATGCGCAAGGCACGCTGGGAGCCGGGGAGTGCTCACGGGGGACGCG
AGTGTGCGCGGGGCACGCTGGGAGCCAGCGCTGCAGGCTGACCCGGAAGGACTGCTGCGGTCCT
GACACCAGCTTCCCTAGCAACCGAGCGGTTTTGCGCAGCGACCGGCCGGCGGTCCGTCAGCAGA
CTGTGATGCCGCTGCAGCTCAGCGGTTACAGCTGGCGGCAGACGCCCACCACAGTCTTCCTGTC
TCTGCCCCTGCGCGGCGTCTGCGCCAGAGATGCGGACGTGTTCTGCTCGGAGAGTTACCTGAAG
GTCAACTTTCCCCCATATCTATTTGAGGCATTTCTCTATGCTCCCATAGATGATGGGAACAGCA
AAGCAAAGATTGGAAATGATGCTATTGTTTTCACCTTGTATAAGAAAGAAGCAGTCATGTGGGA
GACACTTTCTATATCAGGTGTTGACAAAGAGATGATGCAGAGAATAAGAGAAAAATCTATTTTA
CAAGCACAAGAGAGAGCAAAAGAGGCTGCAGAAGCAAAAGCTACAGCAAGACGGGAAGATCAAA
AGTACGCATTAAATGTCATGATGAAGATTGAAGAAGAAGAGAGGAAAAAAATAGAAGATGTGAA
AGAAAATGAGCGGAGAAAAGCAACTGAAGAACTGGAAGCCTGGAAGGAATGTCAGAGAAACGCT
GGAGGACACGAGGGAGCTCGGAGAGAAGAGGAGGCAGGTCAAAGGGGAAAGCCGGTGGGAGAAA
GAAGAAAGTTAAAGCATCAGAGTCTTCCTGGAAGTTTGACATCTAGACACAGTGCAGCAAAAGG
AAGAGACTGGGGAAGCATATTTCCTGCGGAGCGGGAGGAGGAACGCGTCCCTGCGCCCCGCCCG
GCCGGCAGCATCACGGTCAGCTTCACCCCACGCGTGTTCCCCACGGCGCTGCGCGAGTCCCAGG
CGGCCCTGGAGGAGGAGTGGCTGCACAAGCAGGCCCAGGCACGAAGAGCCGTGAACACGGATGC
TCCTGAATTTGGGGATTTAAAAGAAGAAGAGAAGAACCCAGAGTGGCTGAAGGAAAAAGGAAAC
AAATTGTTTGCAACGGAGAACTACCTGGCCGCGGCTGACGCGTACAGCTTAGCCATCAGACTGA
GCAGCAGGACCCCGGTGCTGTACCTGAACCGGGCCGCGTGCCACCTGAAGCTGAGGAACTTGCA
CAAGGCCATCGAAGATTCTTCAACGGCTTTGGCACTGCTGACCCCGCCGGTTGCAGACAATGCA
GATGCAAGAATGAAAGCTCACCTCCGCCGCGGAGCTGCGTTCTGCCAACTGGAACTGTATGTGG
AGGGCCTGCAGGACTACGATGCTGCGCTTAGGATCGATCCAGCTAACACAGCTGTGCAAAGTGA
TGCTGAGAAGATTCGAAATGTAATTCAAGGAACAGAACTAAAATCACAGTGACCACTGGAAGCA
GCTAATGTAGTACCAAGTATTTGAGGTCTTGGTGGACTGTGCAGCCCATCGCTTTGTAAGACAG
AGGAAGCACCTCTGCGAGCTGGGCAGAAGAGGCTGGCTTTCTACACCGAAGTGCGACGGAGTGC
AGAAAGAATATACAGCTGGCACACACCTGTAATAATAGCACTCGGGAGGATCACTGCAGGGCCA
GGGCCAGCTTGGGCTACACAGTGAGACCCTGCCTCAAAAACAAGGAGTGAAAATTTGCATGGCA
CACACCCATATTCTTGGCCCTCAAGACTGCAAGTTCAAACCCAGCCAG

hide sequence

RefSeq Acc Id:

XM_013510269 ⟹ XP_013365723

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955409	499,160 - 522,295 (+)	NCBI

Sequence:

show sequence

GCCGAGAGGGCGTGTTCCCGCGAGCCCCGGCCGCCCTGCTTGCCCGTGACCGTCCTTGGGTGTA
ATCCGACTTTGAGACGCGAGCTCCCGTCCCCAGAGAGCTGAAGACGTCATGTTTCAGTGATCCG
TGCCTTCCCGTGTTCCCAGCACCACGATTCAAACAGGTCAATCTTGGAAGCAGGCGATGTGGCT
TCGACAGGGAACCGCTAGAGAAAAGGCGGTGTTCGCGCGTGATGGGATATTGCCCGGCTATGAA
GGAAGATAAAGTCGAGCCATTTCGTAAGAAAATGGGTGCGGCTTGCAAGCATCAGGTCAACTTT
CCCCCATATCTATTTGAGGCATTTCTCTATGCTCCCATAGATGATGGGAACAGCAAAGCAAAGA
TTGGAAATGATGCTATTGTTTTCACCTTGTATAAGAAAGAAGCAGTCATGTGGGAGACACTTTC
TATATCAGGTGTTGACAAAGAGATGATGCAGAGAATAAGAGAAAAATCTATTTTACAAGCACAA
GAGAGAGCAAAAGAGGCTGCAGAAGCAAAAGCTACAGCAAGACGGGAAGATCAAAAGTACGCAT
TAAATGTCATGATGAAGATTGAAGAAGAAGAGAGGAAAAAAATAGAAGATGTGAAAGAAAATGA
GCGGAGAAAAGCAACTGAAGAACTGGAAGCCTGGAAGGAATGTCAGAGAAACGCTGGAGGACAC
GAGGGAGCTCGGAGAGAAGAGGAGGCAGGTCAAAGGGGAAAGCCGGTGGGAGAAAGAAGAAAGT
TAAAGCATCAGAGTCTTCCTGGAAGTTTGACATCTAGACACAGTGCAGCAAAAGGAAGAGACTG
GGGAAGCATATTTCCTGCGGAGCGGGAGGAGGAACGCGTCCCTGCGCCCCGCCCGGCCGGCAGC
ATCACGGTCAGCTTCACCCCACGCGTGTTCCCCACGGCGCTGCGCGAGTCCCAGGCGGCCCTGG
AGGAGGAGTGGCTGCACAAGCAGGCCCAGGCACGAAGAGCCGTGAACACGGATGCTCCTGAATT
TGGGGATTTAAAAGAAGAAGAGAAGAACCCAGAGTGGCTGAAGGAAAAAGGAAACAAATTGTTT
GCAACGGAGAACTACCTGGCCGCGGCTGACGCGTACAGCTTAGCCATCAGACTGAGCAGCAGGA
CCCCGGTGCTGTACCTGAACCGGGCCGCGTGCCACCTGAAGCTGAGGAACTTGCACAAGGCCAT
CGAAGATTCTTCAACGGCTTTGGCACTGCTGACCCCGCCGGTTGCAGACAATGCAGATGCAAGA
ATGAAAGCTCACCTCCGCCGCGGAGCTGCGTTCTGCCAACTGGAACTGTATGTGGAGGGCCTGC
AGGACTACGATGCTGCGCTTAGGATCGATCCAGCTAACACAGCTGTGCAAAGTGATGCTGAGAA
GATTCGAAATGTAATTCAAGGAACAGAACTAAAATCACAGTGACCACTGGAAGCAGCTAATGTA
GTACCAAGTATTTGAGGTATTTAGTAACAGGTTTTTAAATTTTTCAAAAATAGGAGCTGGGTGA
GGTGGTACACACTGTGACCTTGTCACTTGGGAGGCTGAAGCAGGAGGAGCTAGAGTTCCAGACC
AACCTGGGCTATGAGATTCTTTCTCAACAAAACAAGCGGAGATGTTCGGAATCTTTGTACATAT
ATGGGTGATTATGCAGAATCCATGTACTGCTTAGTACTTCAGTTCTGTAAGGGCTAAACGTTAA
ACATCTGTAGAAAATTAAGTGTTTGCTTTATATAATTTCCAACAAGAATTACCATATTAAATTT
TTTTTTTTTTTGTCT

hide sequence

RefSeq Acc Id:

XM_013510270 ⟹ XP_013365724

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955409	499,160 - 522,295 (+)	NCBI

Sequence:

show sequence

GCCGAGAGGGCGTGTTCCCGCGAGCCCCGGCCGCCCTGCTTGCCCGTGACCGTCCTTGGGTGTA
ATCCGACTTTGAGACGCGAGCTCCCGTCCCCAGAGAGCTGAAGACGTCATGTTTCAGTGATCCG
TGCCTTCCCGTGTTCCCAGCACCACGATTCAAACAGGTCAACTTTCCCCCATATCTATTTGAGG
CATTTCTCTATGCTCCCATAGATGATGGGAACAGCAAAGCAAAGATTGGAAATGATGCTATTGT
TTTCACCTTGTATAAGAAAGAAGCAGTCATGTGGGAGACACTTTCTATATCAGGTGTTGACAAA
GAGATGATGCAGAGAATAAGAGAAAAATCTATTTTACAAGCACAAGAGAGAGCAAAAGAGGCTG
CAGAAGCAAAAGCTACAGCAAGACGGGAAGATCAAAAGTACGCATTAAATGTCATGATGAAGAT
TGAAGAAGAAGAGAGGAAAAAAATAGAAGATGTGAAAGAAAATGAGCGGAGAAAAGCAACTGAA
GAACTGGAAGCCTGGAAGGAATGTCAGAGAAACGCTGGAGGACACGAGGGAGCTCGGAGAGAAG
AGGAGGCAGGTCAAAGGGGAAAGCCGGTGGGAGAAAGAAGAAAGTTAAAGCATCAGAGTCTTCC
TGGAAGTTTGACATCTAGACACAGTGCAGCAAAAGGAAGAGACTGGGGAAGCATATTTCCTGCG
GAGCGGGAGGAGGAACGCGTCCCTGCGCCCCGCCCGGCCGGCAGCATCACGGTCAGCTTCACCC
CACGCGTGTTCCCCACGGCGCTGCGCGAGTCCCAGGCGGCCCTGGAGGAGGAGTGGCTGCACAA
GCAGGCCCAGGCACGAAGAGCCGTGAACACGGATGCTCCTGAATTTGGGGATTTAAAAGAAGAA
GAGAAGAACCCAGAGTGGCTGAAGGAAAAAGGAAACAAATTGTTTGCAACGGAGAACTACCTGG
CCGCGGCTGACGCGTACAGCTTAGCCATCAGACTGAGCAGCAGGACCCCGGTGCTGTACCTGAA
CCGGGCCGCGTGCCACCTGAAGCTGAGGAACTTGCACAAGGCCATCGAAGATTCTTCAACGGCT
TTGGCACTGCTGACCCCGCCGGTTGCAGACAATGCAGATGCAAGAATGAAAGCTCACCTCCGCC
GCGGAGCTGCGTTCTGCCAACTGGAACTGTATGTGGAGGGCCTGCAGGACTACGATGCTGCGCT
TAGGATCGATCCAGCTAACACAGCTGTGCAAAGTGATGCTGAGAAGATTCGAAATGTAATTCAA
GGAACAGAACTAAAATCACAGTGACCACTGGAAGCAGCTAATGTAGTACCAAGTATTTGAGGTA
TTTAGTAACAGGTTTTTAAATTTTTCAAAAATAGGAGCTGGGTGAGGTGGTACACACTGTGACC
TTGTCACTTGGGAGGCTGAAGCAGGAGGAGCTAGAGTTCCAGACCAACCTGGGCTATGAGATTC
TTTCTCAACAAAACAAGCGGAGATGTTCGGAATCTTTGTACATATATGGGTGATTATGCAGAAT
CCATGTACTGCTTAGTACTTCAGTTCTGTAAGGGCTAAACGTTAAACATCTGTAGAAAATTAAG
TGTTTGCTTTATATAATTTCCAACAAGAATTACCATATTAAATTTTTTTTTTTTTTGTCT

hide sequence

Protein Sequences


Protein RefSeqs	XP_013365720	(Get FASTA)	NCBI Sequence Viewer
	XP_013365721	(Get FASTA)	NCBI Sequence Viewer
	XP_013365722	(Get FASTA)	NCBI Sequence Viewer
	XP_013365723	(Get FASTA)	NCBI Sequence Viewer
	XP_013365724	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_013365722 ⟸ XM_013510268

- Peptide Label:

isoform X1

- Sequence:

show sequence

MPLQLSGYSWRQTPTTVFLSLPLRGVCARDADVFCSESYLKVNFPPYLFEAFLYAPIDDGNSKA
KIGNDAIVFTLYKKEAVMWETLSISGVDKEMMQRIREKSILQAQERAKEAAEAKATARREDQKY
ALNVMMKIEEEERKKIEDVKENERRKATEELEAWKECQRNAGGHEGARREEEAGQRGKPVGERR
KLKHQSLPGSLTSRHSAAKGRDWGSIFPAEREEERVPAPRPAGSITVSFTPRVFPTALRESQAA
LEEEWLHKQAQARRAVNTDAPEFGDLKEEEKNPEWLKEKGNKLFATENYLAAADAYSLAIRLSS
RTPVLYLNRAACHLKLRNLHKAIEDSSTALALLTPPVADNADARMKAHLRRGAAFCQLELYVEG
LQDYDAALRIDPANTAVQSDAEKIRNVIQGTELKSQ

hide sequence

RefSeq Acc Id:

XP_013365721 ⟸ XM_013510267

- Peptide Label:

isoform X1

- Sequence:

show sequence

MPLQLSGYSWRQTPTTVFLSLPLRGVCARDADVFCSESYLKVNFPPYLFEAFLYAPIDDGNSKA
KIGNDAIVFTLYKKEAVMWETLSISGVDKEMMQRIREKSILQAQERAKEAAEAKATARREDQKY
ALNVMMKIEEEERKKIEDVKENERRKATEELEAWKECQRNAGGHEGARREEEAGQRGKPVGERR
KLKHQSLPGSLTSRHSAAKGRDWGSIFPAEREEERVPAPRPAGSITVSFTPRVFPTALRESQAA
LEEEWLHKQAQARRAVNTDAPEFGDLKEEEKNPEWLKEKGNKLFATENYLAAADAYSLAIRLSS
RTPVLYLNRAACHLKLRNLHKAIEDSSTALALLTPPVADNADARMKAHLRRGAAFCQLELYVEG
LQDYDAALRIDPANTAVQSDAEKIRNVIQGTELKSQ

hide sequence

RefSeq Acc Id:

XP_013365720 ⟸ XM_013510266

- Peptide Label:

isoform X1

- Sequence:

show sequence

MPLQLSGYSWRQTPTTVFLSLPLRGVCARDADVFCSESYLKVNFPPYLFEAFLYAPIDDGNSKA
KIGNDAIVFTLYKKEAVMWETLSISGVDKEMMQRIREKSILQAQERAKEAAEAKATARREDQKY
ALNVMMKIEEEERKKIEDVKENERRKATEELEAWKECQRNAGGHEGARREEEAGQRGKPVGERR
KLKHQSLPGSLTSRHSAAKGRDWGSIFPAEREEERVPAPRPAGSITVSFTPRVFPTALRESQAA
LEEEWLHKQAQARRAVNTDAPEFGDLKEEEKNPEWLKEKGNKLFATENYLAAADAYSLAIRLSS
RTPVLYLNRAACHLKLRNLHKAIEDSSTALALLTPPVADNADARMKAHLRRGAAFCQLELYVEG
LQDYDAALRIDPANTAVQSDAEKIRNVIQGTELKSQ

hide sequence

RefSeq Acc Id:

XP_013365723 ⟸ XM_013510269

- Peptide Label:

isoform X2

- Sequence:

show sequence

MGYCPAMKEDKVEPFRKKMGAACKHQVNFPPYLFEAFLYAPIDDGNSKAKIGNDAIVFTLYKKE
AVMWETLSISGVDKEMMQRIREKSILQAQERAKEAAEAKATARREDQKYALNVMMKIEEEERKK
IEDVKENERRKATEELEAWKECQRNAGGHEGARREEEAGQRGKPVGERRKLKHQSLPGSLTSRH
SAAKGRDWGSIFPAEREEERVPAPRPAGSITVSFTPRVFPTALRESQAALEEEWLHKQAQARRA
VNTDAPEFGDLKEEEKNPEWLKEKGNKLFATENYLAAADAYSLAIRLSSRTPVLYLNRAACHLK
LRNLHKAIEDSSTALALLTPPVADNADARMKAHLRRGAAFCQLELYVEGLQDYDAALRIDPANT
AVQSDAEKIRNVIQGTELKSQ

hide sequence

RefSeq Acc Id:

XP_013365724 ⟸ XM_013510270

- Peptide Label:

isoform X3

- Sequence:

show sequence

MWETLSISGVDKEMMQRIREKSILQAQERAKEAAEAKATARREDQKYALNVMMKIEEEERKKIE
DVKENERRKATEELEAWKECQRNAGGHEGARREEEAGQRGKPVGERRKLKHQSLPGSLTSRHSA
AKGRDWGSIFPAEREEERVPAPRPAGSITVSFTPRVFPTALRESQAALEEEWLHKQAQARRAVN
TDAPEFGDLKEEEKNPEWLKEKGNKLFATENYLAAADAYSLAIRLSSRTPVLYLNRAACHLKLR
NLHKAIEDSSTALALLTPPVADNADARMKAHLRRGAAFCQLELYVEGLQDYDAALRIDPANTAV
QSDAEKIRNVIQGTELKSQ

hide sequence

Additional Information

External Database Links

Database	Acc Id	Source(s)
NCBI Gene	Dyx1c1	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2017-03-28	Dnaaf4	dynein axonemal assembly factor 4	Dyx1c1	dyslexia susceptibility 1 candidate 1	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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