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Gene: Chtop (chromatin target of PRMT1) Chinchilla lanigera

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Symbol:

Chtop

Name:

chromatin target of PRMT1

RGD ID:

8758264

Description:

ENCODES a protein that exhibits methyl-CpG binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); in utero embryonic development (ortholog); mRNA export from nucleus (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); immunodeficiency 42 (ortholog); MHC class II deficiency (ortholog); FOUND IN nuclear speck (ortholog); transcription export complex (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955545	282,342 - 292,785 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955545	282,342 - 292,428 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

gastrointestinal stromal tumor (ISO)

immunodeficiency 42 (ISO)

MHC class II deficiency (ISO)

parathyroid carcinoma (ISO)

severe congenital neutropenia 3 (ISO)

severe congenital neutropenia 5 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chromatin remodeling (ISO)

in utero embryonic development (ISO)

mRNA export from nucleus (ISO)

positive regulation of ATP-dependent activity (ISO)

positive regulation of helicase activity (ISO)

Cellular Component

nuclear speck (ISO)

transcription export complex (ISO)

Molecular Function

methyl-CpG binding (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Genomics

Comparative Map Data

Chtop
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955545	282,342 - 292,785 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955545	282,342 - 292,428 (+)	NCBI	ChiLan1.0	ChiLan1.0

CHTOP
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	153,634,066 - 153,646,306 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	153,633,982 - 153,646,306 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	153,606,542 - 153,618,782 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	151,873,149 - 151,884,603 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	126,677,559 - 126,689,013 (+)	NCBI		Celera
Cytogenetic Map	1	q21.3	NCBI
HuRef	1	124,969,964 - 124,982,321 (+)	NCBI		HuRef
CHM1_1	1	155,002,435 - 155,014,759 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	152,771,330 - 152,783,570 (+)	NCBI		T2T-CHM13v2.0

Chtop
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	90,405,846 - 90,417,400 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	90,406,263 - 90,416,805 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	90,498,539 - 90,509,527 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	90,498,956 - 90,509,498 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	90,302,880 - 90,313,365 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	90,584,885 - 90,595,370 (-)	NCBI		MGSCv36	mm8
Celera	3	90,536,803 - 90,547,288 (-)	NCBI		Celera
Cytogenetic Map	3	F1	NCBI
cM Map	3	39.24	NCBI

Chtop
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	178,278,848 - 178,291,142 (-)	NCBI		GRCr8
mRatBN7.2	2	175,981,266 - 175,992,820 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	175,981,271 - 175,992,748 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	183,121,379 - 183,132,881 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	181,143,642 - 181,155,144 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	175,743,986 - 175,755,485 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	189,887,850 - 189,900,079 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	189,887,857 - 189,899,325 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	209,318,314 - 209,330,501 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	182,772,001 - 182,783,476 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	182,722,109 - 182,733,582 (-)	NCBI
Celera	2	169,916,772 - 169,928,245 (-)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

CHTOP
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	96,186,853 - 96,198,958 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	95,922,882 - 95,934,368 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	128,989,920 - 129,002,242 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	132,617,934 - 132,630,654 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	132,617,934 - 132,630,654 (+)	Ensembl	panpan1.1		panPan2

CHTOP
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	43,418,902 - 43,428,012 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	43,419,707 - 43,427,856 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	42,911,925 - 42,921,035 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	43,368,614 - 43,377,725 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	43,368,614 - 43,377,583 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	43,070,678 - 43,079,784 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	43,124,385 - 43,133,500 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	43,408,041 - 43,417,155 (-)	NCBI		UU_Cfam_GSD_1.0

Chtop
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	24,404,354 - 24,414,140 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936580	3,434,773 - 3,445,080 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936580	3,436,260 - 3,444,522 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CHTOP
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	95,994,263 - 96,005,585 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	95,996,030 - 96,006,511 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	104,889,209 - 104,898,793 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CHTOP
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	10,159,463 - 10,170,949 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	10,154,734 - 10,170,883 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	9,536,012 - 9,548,571 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Chtop
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624885	3,501,470 - 3,511,451 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624885	3,501,468 - 3,511,481 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005411419	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005411421	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005411422	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005411423	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005411424	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005411425	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013508321	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013508322	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013508323	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01071781	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01071782	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDJ01010515	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000004230 ⟹ ENSCLAP00000004149

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955545	282,342 - 292,785 (+)	Ensembl

Ensembl Acc Id:

ENSCLAT00000004231 ⟹ ENSCLAP00000004150

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955545	282,342 - 292,428 (+)	Ensembl

RefSeq Acc Id:

XM_005411419 ⟹ XP_005411476

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955545	282,342 - 292,428 (+)	NCBI

Sequence:

show sequence

CGTCCGTTCGGGTTTGGCCGGTCCCCGGCCCGTCTGCCGCAGCCGTGGTGGCAGCCCCGGGAGG
AGCACTGGCGTCCGTTTCCTTCGATCCTCGGGATTTGAAGATGGCTGCCCAGTCAGCGCCGAAA
GTTGTGCTAAAAAGCACCACCAAGATGTCTCTAAATGAGCGCTTTACTAATATGCTGAAGAACA
AACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAACAACAGCAGCTAGCCAGTGCCAG
AAACAGAAGACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAG
CAGACTTTATATGCAAGTCCGGACAGTGCCTGTGGAAGGATATGTCCAAGCTGTGGCTGGGCGT
CTGAAGGGCGGTGCCATGCAACTAAGAGCTTAAAGCAGCGCCTGGGTAAGAGTAACATCCAGGC
ACGGTTAGGCCGACCCATAGGGGCCCTGGCCAGGGGAGCCATTGGAGGACGAGGCCTGCCCATA
GTCCAGAGAGGCTTGCCCAGAGGAGGACTGCGTGGGGCACGCGCCACCAGAACCCTTCTTAGGG
GCGGGATGTCGCTCCGAGGTCAAAACCTGCTTCGAGGTGGACGAGCCGTAGCTCCCCGAATGGG
CTTAAGAAGAGGTGGTGTTCGAGGTCGTGGAGGTCCTGGGAGAGGGGGCCTAGGGCGTGGAGCT
ATGGGTCGTGGCGGAATCGGTGGTAGAGGTCGGGGTATGATAGGTCGGGGAAGAGGGGGCTTTG
GAGGACGAGGACGAGGACGTGGACGGGGAAGAGGCGCCCTTACTCGCCCTGTATTGACCAAGGA
GCAGCTGGACAACCAATTGGATGCCTACATGTCGAAAACTAAAGGACACCTGGATGCTGAGTTG
GATGCCTACATGGCACAGACAGATCCTGAAACCAATGATTGAAGCCTGCCTGCCTACCCTTCTG
TGAGAGACTCTTGTTAAAGTTACTACATCTGTAAATAGCCTTGGGATGACAGAGAAGAAACCTG
GTTGATAGTAGAAGGACCTATCATAACAGGCTGTGGAGTTACCTGCCACCAGTTTGTGCATTTT
GTGTGTTCCTTTTACTTTTGATACTGTGTTGTATGAAAACTTTTTCCTTTGATTTGGTTGGATG
TTTTTTGTTGTTTTTTCCCTTCATCGAGACTTCTCTTGGAACATGAATGTATTGGCCTTGTGGG
TAGAACACTTACCCTACCTCTGCCTTCTGTCGCCTGCCATACACTGATATTCTAATGTATCCTG
TGTTTGTCTCTATGCCCCCACCAAAAGGTCCCAGAAAGAGCCAGTGTTCCTACCGAATGCCTTG
GTTTCTGAGTTGGAATTCTGTTGTATGTCCTCTTTACTTGGCTCTTAGTGTTAGGAAGATGTGG
GGCTCAAAAGTGCATTCAGCTATGTTGATAATGCTACAGGGCCACATTACAGGTAATACCTTCA
GTTGCTTTGGAATGACTACCGTGTTTATTGACACCACATAGATGATAACAGTGTGATGAGTTGA
ATATGTGTACTTCTACCCCCAAGTGAGATATTAAAGCTTTCCCCTGGGCCTTGTATGTCCAAAG
AGGTTGAGTTGGCTTCTACCTAGACCATAGGGGAGGAAGCCAGCGGTTTGGTAGATGCAGCAGA
AGGAAAAAGGAATGGGAGAGCAGTGGGTTACAAACTAACTGCTGAAGGATGGAGGGTTCAAGAG
CTATTGAATGTTGAAATCCATTATTCTCATGTTTGTTTGGGCTTCTCTACTTAATGGCTTTATT
TGACCCTCTTTCCCTTAAAGGTTTAAGTTCAACCATAATCTGTCAGTTATTGGAGTTTCAGTGG
AATCTTGTATTTCTGGTTCATGACAATAAATTGTTCTCTCGAATCCA

hide sequence

RefSeq Acc Id:

XM_005411421 ⟹ XP_005411478

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955545	282,342 - 292,428 (+)	NCBI

Sequence:

show sequence

CGTCCGTTCGGGTTTGGCCGGTCCCCGGCCCGTCTGCCGCAGCCGTGGTGGCAGCCCCGGGAGG
AGCACTGGCGTCCGTTTCCTTCGATCCTCGGGATTTGAAGATGGCTGCCCAGTCAGCGCCGAAA
GTTGTGCTAAAAAGCACCACCAAGATGTCTCTAAATGAGCGCTTTACTAATATGCTGAAGAACA
AACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAACAACAGCAGCTAGCCAGTGCCAG
AAACAGAAGACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAG
CAGAAGAGCTTAAAGCAGCGCCTGGGTAAGAGTAACATCCAGGCACGGTTAGGCCGACCCATAG
GGGCCCTGGCCAGGGGAGCCATTGGAGGACGAGGCCTGCCCATAGTCCAGAGAGGCTTGCCCAG
AGGAGGACTGCGTGGGGCACGCGCCACCAGAACCCTTCTTAGGGGCGGGATGTCGCTCCGAGGT
CAAAACCTGCTTCGAGGTGGACGAGCCGTAGCTCCCCGAATGGGCTTAAGAAGAGGTGGTGTTC
GAGGTCGTGGAGGTCCTGGGAGAGGGGGCCTAGGGCGTGGAGCTATGGGTCGTGGCGGAATCGG
TGGTAGAGGTCGGGGTATGATAGGTCGGGGAAGAGGGGGCTTTGGAGGACGAGGACGAGGACGT
GGACGGGGAAGAGGCGCCCTTACTCGCCCTGTATTGACCAAGGAGCAGCTGGACAACCAATTGG
ATGCCTACATGTCGAAAACTAAAGGACACCTGGATGCTGAGTTGGATGCCTACATGGCACAGAC
AGATCCTGAAACCAATGATTGAAGCCTGCCTGCCTACCCTTCTGTGAGAGACTCTTGTTAAAGT
TACTACATCTGTAAATAGCCTTGGGATGACAGAGAAGAAACCTGGTTGATAGTAGAAGGACCTA
TCATAACAGGCTGTGGAGTTACCTGCCACCAGTTTGTGCATTTTGTGTGTTCCTTTTACTTTTG
ATACTGTGTTGTATGAAAACTTTTTCCTTTGATTTGGTTGGATGTTTTTTGTTGTTTTTTCCCT
TCATCGAGACTTCTCTTGGAACATGAATGTATTGGCCTTGTGGGTAGAACACTTACCCTACCTC
TGCCTTCTGTCGCCTGCCATACACTGATATTCTAATGTATCCTGTGTTTGTCTCTATGCCCCCA
CCAAAAGGTCCCAGAAAGAGCCAGTGTTCCTACCGAATGCCTTGGTTTCTGAGTTGGAATTCTG
TTGTATGTCCTCTTTACTTGGCTCTTAGTGTTAGGAAGATGTGGGGCTCAAAAGTGCATTCAGC
TATGTTGATAATGCTACAGGGCCACATTACAGGTAATACCTTCAGTTGCTTTGGAATGACTACC
GTGTTTATTGACACCACATAGATGATAACAGTGTGATGAGTTGAATATGTGTACTTCTACCCCC
AAGTGAGATATTAAAGCTTTCCCCTGGGCCTTGTATGTCCAAAGAGGTTGAGTTGGCTTCTACC
TAGACCATAGGGGAGGAAGCCAGCGGTTTGGTAGATGCAGCAGAAGGAAAAAGGAATGGGAGAG
CAGTGGGTTACAAACTAACTGCTGAAGGATGGAGGGTTCAAGAGCTATTGAATGTTGAAATCCA
TTATTCTCATGTTTGTTTGGGCTTCTCTACTTAATGGCTTTATTTGACCCTCTTTCCCTTAAAG
GTTTAAGTTCAACCATAATCTGTCAGTTATTGGAGTTTCAGTGGAATCTTGTATTTCTGGTTCA
TGACAATAAATTGTTCTCTCGAATCCA

hide sequence

RefSeq Acc Id:

XM_005411422 ⟹ XP_005411479

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955545	282,342 - 292,428 (+)	NCBI

Sequence:

show sequence

CGTCCGTTCGGGTTTGGCCGGTCCCCGGCCCGTCTGCCGCAGCCGTGGTGGCAGCCCCGGGAGG
AGCACTGGCGTCCGTTTCCTTCGATCCTCGGGATTTGAAGATGGCTGCCCAGTCAGCGCCGAAA
GTTGTGCTAAAAAGCACCACCAAGATGTCTCTAAATGAGCGCTTTACTAATATGCTGAAGAACA
AACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAACAACAGCAGCTAGCCAGTGCCAG
AAACAGAAGACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAG
CAGAGCTTAAAGCAGCGCCTGGGTAAGAGTAACATCCAGGCACGGTTAGGCCGACCCATAGGGG
CCCTGGCCAGGGGAGCCATTGGAGGACGAGGCCTGCCCATAGTCCAGAGAGGCTTGCCCAGAGG
AGGACTGCGTGGGGCACGCGCCACCAGAACCCTTCTTAGGGGCGGGATGTCGCTCCGAGGTCAA
AACCTGCTTCGAGGTGGACGAGCCGTAGCTCCCCGAATGGGCTTAAGAAGAGGTGGTGTTCGAG
GTCGTGGAGGTCCTGGGAGAGGGGGCCTAGGGCGTGGAGCTATGGGTCGTGGCGGAATCGGTGG
TAGAGGTCGGGGTATGATAGGTCGGGGAAGAGGGGGCTTTGGAGGACGAGGACGAGGACGTGGA
CGGGGAAGAGGCGCCCTTACTCGCCCTGTATTGACCAAGGAGCAGCTGGACAACCAATTGGATG
CCTACATGTCGAAAACTAAAGGACACCTGGATGCTGAGTTGGATGCCTACATGGCACAGACAGA
TCCTGAAACCAATGATTGAAGCCTGCCTGCCTACCCTTCTGTGAGAGACTCTTGTTAAAGTTAC
TACATCTGTAAATAGCCTTGGGATGACAGAGAAGAAACCTGGTTGATAGTAGAAGGACCTATCA
TAACAGGCTGTGGAGTTACCTGCCACCAGTTTGTGCATTTTGTGTGTTCCTTTTACTTTTGATA
CTGTGTTGTATGAAAACTTTTTCCTTTGATTTGGTTGGATGTTTTTTGTTGTTTTTTCCCTTCA
TCGAGACTTCTCTTGGAACATGAATGTATTGGCCTTGTGGGTAGAACACTTACCCTACCTCTGC
CTTCTGTCGCCTGCCATACACTGATATTCTAATGTATCCTGTGTTTGTCTCTATGCCCCCACCA
AAAGGTCCCAGAAAGAGCCAGTGTTCCTACCGAATGCCTTGGTTTCTGAGTTGGAATTCTGTTG
TATGTCCTCTTTACTTGGCTCTTAGTGTTAGGAAGATGTGGGGCTCAAAAGTGCATTCAGCTAT
GTTGATAATGCTACAGGGCCACATTACAGGTAATACCTTCAGTTGCTTTGGAATGACTACCGTG
TTTATTGACACCACATAGATGATAACAGTGTGATGAGTTGAATATGTGTACTTCTACCCCCAAG
TGAGATATTAAAGCTTTCCCCTGGGCCTTGTATGTCCAAAGAGGTTGAGTTGGCTTCTACCTAG
ACCATAGGGGAGGAAGCCAGCGGTTTGGTAGATGCAGCAGAAGGAAAAAGGAATGGGAGAGCAG
TGGGTTACAAACTAACTGCTGAAGGATGGAGGGTTCAAGAGCTATTGAATGTTGAAATCCATTA
TTCTCATGTTTGTTTGGGCTTCTCTACTTAATGGCTTTATTTGACCCTCTTTCCCTTAAAGGTT
TAAGTTCAACCATAATCTGTCAGTTATTGGAGTTTCAGTGGAATCTTGTATTTCTGGTTCATGA
CAATAAATTGTTCTCTCGAATCCA

hide sequence

RefSeq Acc Id:

XM_005411423 ⟹ XP_005411480

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955545	282,342 - 292,428 (+)	NCBI

Sequence:

show sequence

CGTCCGTTCGGGTTTGGCCGGTCCCCGGCCCGTCTGCCGCAGCCGTGGTGGCAGCCCCGGGAGG
AGCACTGGCGTCCGTTTCCTTCGATCCTCGGGATTTGAAGATGGCTGCCCAGTCAGCGCCGAAA
GTTGTGCTAAAAAGCACCACCAAGATGTCTCTAAATGAGCGCTTTACTAATATGCTGAAGAACA
AACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAACAACAGCAGCTAGCCAGTGCCAG
AAACAGAAGACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAG
CAGACTTTATATGCAAGTCCGGACAGTGCCTGTGGAAGGATATGTCCAAGCTGTGGCTGGGCGT
CTGAAGGGCGGTGCCATGCAACTAAGAGCTTAAAGCAGCGCCTGGGTAAGAGTAACATCCAGGC
ACGGTTAGGCCGACCCATAGGGGCCCTGGCCAGGGGAGCCATTGGAGGACGAGGCCTGCCCATA
GTCCAGAGAGGCTTGCCCAGAGGAGGACTGCGTGGGGCACGCGCCACCAGAACCCTTCTTAGGG
GCGGGATGTCGCTCCGAGGTCGGGGTATGATAGGTCGGGGAAGAGGGGGCTTTGGAGGACGAGG
ACGAGGACGTGGACGGGGAAGAGGCGCCCTTACTCGCCCTGTATTGACCAAGGAGCAGCTGGAC
AACCAATTGGATGCCTACATGTCGAAAACTAAAGGACACCTGGATGCTGAGTTGGATGCCTACA
TGGCACAGACAGATCCTGAAACCAATGATTGAAGCCTGCCTGCCTACCCTTCTGTGAGAGACTC
TTGTTAAAGTTACTACATCTGTAAATAGCCTTGGGATGACAGAGAAGAAACCTGGTTGATAGTA
GAAGGACCTATCATAACAGGCTGTGGAGTTACCTGCCACCAGTTTGTGCATTTTGTGTGTTCCT
TTTACTTTTGATACTGTGTTGTATGAAAACTTTTTCCTTTGATTTGGTTGGATGTTTTTTGTTG
TTTTTTCCCTTCATCGAGACTTCTCTTGGAACATGAATGTATTGGCCTTGTGGGTAGAACACTT
ACCCTACCTCTGCCTTCTGTCGCCTGCCATACACTGATATTCTAATGTATCCTGTGTTTGTCTC
TATGCCCCCACCAAAAGGTCCCAGAAAGAGCCAGTGTTCCTACCGAATGCCTTGGTTTCTGAGT
TGGAATTCTGTTGTATGTCCTCTTTACTTGGCTCTTAGTGTTAGGAAGATGTGGGGCTCAAAAG
TGCATTCAGCTATGTTGATAATGCTACAGGGCCACATTACAGGTAATACCTTCAGTTGCTTTGG
AATGACTACCGTGTTTATTGACACCACATAGATGATAACAGTGTGATGAGTTGAATATGTGTAC
TTCTACCCCCAAGTGAGATATTAAAGCTTTCCCCTGGGCCTTGTATGTCCAAAGAGGTTGAGTT
GGCTTCTACCTAGACCATAGGGGAGGAAGCCAGCGGTTTGGTAGATGCAGCAGAAGGAAAAAGG
AATGGGAGAGCAGTGGGTTACAAACTAACTGCTGAAGGATGGAGGGTTCAAGAGCTATTGAATG
TTGAAATCCATTATTCTCATGTTTGTTTGGGCTTCTCTACTTAATGGCTTTATTTGACCCTCTT
TCCCTTAAAGGTTTAAGTTCAACCATAATCTGTCAGTTATTGGAGTTTCAGTGGAATCTTGTAT
TTCTGGTTCATGACAATAAATTGTTCTCTCGAATCCA

hide sequence

RefSeq Acc Id:

XM_005411424 ⟹ XP_005411481

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955545	282,342 - 292,428 (+)	NCBI

Sequence:

show sequence

CGTCCGTTCGGGTTTGGCCGGTCCCCGGCCCGTCTGCCGCAGCCGTGGTGGCAGCCCCGGGAGG
AGCACTGGCGTCCGTTTCCTTCGATCCTCGGGATTTGAAGATGGCTGCCCAGTCAGCGCCGAAA
GTTGTGCTAAAAAGCACCACCAAGATGTCTCTAAATGAGCGCTTTACTAATATGCTGAAGAACA
AACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAACAACAGCAGCTAGCCAGTGCCAG
AAACAGAAGACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAG
CAGAGCTTAAAGCAGCGCCTGGGTAAGAGTAACATCCAGGCACGGTTAGGCCGACCCATAGGGG
CCCTGGCCAGGGGAGCCATTGGAGGACGAGGCCTGCCCATAGTCCAGAGAGGCTTGCCCAGAGG
AGGACTGCGTGGGGCACGCGCCACCAGAACCCTTCTTAGGGGCGGGATGTCGCTCCGAGGTCGG
GGTATGATAGGTCGGGGAAGAGGGGGCTTTGGAGGACGAGGACGAGGACGTGGACGGGGAAGAG
GCGCCCTTACTCGCCCTGTATTGACCAAGGAGCAGCTGGACAACCAATTGGATGCCTACATGTC
GAAAACTAAAGGACACCTGGATGCTGAGTTGGATGCCTACATGGCACAGACAGATCCTGAAACC
AATGATTGAAGCCTGCCTGCCTACCCTTCTGTGAGAGACTCTTGTTAAAGTTACTACATCTGTA
AATAGCCTTGGGATGACAGAGAAGAAACCTGGTTGATAGTAGAAGGACCTATCATAACAGGCTG
TGGAGTTACCTGCCACCAGTTTGTGCATTTTGTGTGTTCCTTTTACTTTTGATACTGTGTTGTA
TGAAAACTTTTTCCTTTGATTTGGTTGGATGTTTTTTGTTGTTTTTTCCCTTCATCGAGACTTC
TCTTGGAACATGAATGTATTGGCCTTGTGGGTAGAACACTTACCCTACCTCTGCCTTCTGTCGC
CTGCCATACACTGATATTCTAATGTATCCTGTGTTTGTCTCTATGCCCCCACCAAAAGGTCCCA
GAAAGAGCCAGTGTTCCTACCGAATGCCTTGGTTTCTGAGTTGGAATTCTGTTGTATGTCCTCT
TTACTTGGCTCTTAGTGTTAGGAAGATGTGGGGCTCAAAAGTGCATTCAGCTATGTTGATAATG
CTACAGGGCCACATTACAGGTAATACCTTCAGTTGCTTTGGAATGACTACCGTGTTTATTGACA
CCACATAGATGATAACAGTGTGATGAGTTGAATATGTGTACTTCTACCCCCAAGTGAGATATTA
AAGCTTTCCCCTGGGCCTTGTATGTCCAAAGAGGTTGAGTTGGCTTCTACCTAGACCATAGGGG
AGGAAGCCAGCGGTTTGGTAGATGCAGCAGAAGGAAAAAGGAATGGGAGAGCAGTGGGTTACAA
ACTAACTGCTGAAGGATGGAGGGTTCAAGAGCTATTGAATGTTGAAATCCATTATTCTCATGTT
TGTTTGGGCTTCTCTACTTAATGGCTTTATTTGACCCTCTTTCCCTTAAAGGTTTAAGTTCAAC
CATAATCTGTCAGTTATTGGAGTTTCAGTGGAATCTTGTATTTCTGGTTCATGACAATAAATTG
TTCTCTCGAATCCA

hide sequence

RefSeq Acc Id:

XM_005411425 ⟹ XP_005411482

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955545	282,342 - 288,302 (+)	NCBI

Sequence:

show sequence

CGTCCGTTCGGGTTTGGCCGGTCCCCGGCCCGTCTGCCGCAGCCGTGGTGGCAGCCCCGGGAGG
AGCACTGGCGTCCGTTTCCTTCGATCCTCGGGATTTGAAGATGGCTGCCCAGTCAGCGCCGAAA
GTTGTGCTAAAAAGCACCACCAAGATGTCTCTAAATGAGCGCTTTACTAATATGCTGAAGAACA
AACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAACAACAGCAGCTAGCCAGTGCCAG
AAACAGAAGACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAG
CAGACTTTATATGCAAGTCCGGACAGTGCCTGTGGAAGGATATGTCCAAGCTGTGGCTGGGCGT
CTGAAGGGCGGTGCCATGCAACTGTAAAAAATGGACCGTCTGGAGATAGATACTCAAAGGAAAA
ATGGAGACACTGGCTTCTTTGACTGAAAAATCAATTTTTTTCTTAATCACGAGAATTCAAATGA
ACTTGTACTTTAAACTTTGCCCAATGTGATGAACTTCTTATGGTGTTTGAGTAAGCCTTTGAAG
ACAGTGGTAGTCCTTGGGCAGGTATGAATTCGGTCATGTCTTTGTCAACCTGTGGTTCAAAAAC
AGTGTGTGTACTAAAACGTAAGTTCCAGCTTGCTGTATATGACTTCTGTATCCAAATAATTGAG
GTGATTGTGGTTCTATCAAGTCCATGGAAACTTACTGAAGCTTAAAGTTTCTGCTCTGGATTAG
AATTCTACTTCTTTTAAGTCAAAGAAAGACTTCTGGTTTGGGATCCTTATGATACCCACTGCAG
GTTTATTTCCCAACATACCAGGTATCTCACTTGCTTTTTTCTCTCCGCACTTGGAATTGCCAAA
TCTCACTGAATTGCTTTTTTGATCTCAATCCTCCAACACCTTTTCTTCCAGAAGAGCTTAAAGC
AGCGCCTGGGTAAGAGTAACATCCAGGCACGGTTAGGCCGACCCATAGGGGCCCTGGCCAGGGG
AGCCATTGGAGGACGAG

hide sequence

RefSeq Acc Id:

XM_013508321 ⟹ XP_013363775

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955545	282,342 - 292,428 (+)	NCBI

Sequence:

show sequence

CGTCCGTTCGGGTTTGGCCGGTCCCCGGCCCGTCTGCCGCAGCCGTGGTGGCAGCCCCGGGAGG
AGCACTGGCGTCCGTTTCCTTCGATCCTCGGGATTTGAAGATGGCTGCCCAGTCAGCGCCGAAA
GTTGTGCTAAAAAGCACCACCAAGATGTCTCTAAATGAGCGCTTTACTAATATGCTGAAGAACA
AACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAACAACAGCAGCTAGCCAGTGCCAG
AAACAGAAGACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAG
CAGAAGAGCTTAAAGCAGCGCCTGGGTAAGAGTAACATCCAGGCACGGTTAGGCCGACCCATAG
GGGCCCTGGCCAGGGGAGCCATTGGAGGACGAGGCCTGCCCATAGTCCAGAGAGGCTTGCCCAG
AGGAGGACTGCGTGGGGCACGCGCCACCAGAACCCTTCTTAGGGGCGGGATGTCGCTCCGAGGT
CGGGGTATGATAGGTCGGGGAAGAGGGGGCTTTGGAGGACGAGGACGAGGACGTGGACGGGGAA
GAGGCGCCCTTACTCGCCCTGTATTGACCAAGGAGCAGCTGGACAACCAATTGGATGCCTACAT
GTCGAAAACTAAAGGACACCTGGATGCTGAGTTGGATGCCTACATGGCACAGACAGATCCTGAA
ACCAATGATTGAAGCCTGCCTGCCTACCCTTCTGTGAGAGACTCTTGTTAAAGTTACTACATCT
GTAAATAGCCTTGGGATGACAGAGAAGAAACCTGGTTGATAGTAGAAGGACCTATCATAACAGG
CTGTGGAGTTACCTGCCACCAGTTTGTGCATTTTGTGTGTTCCTTTTACTTTTGATACTGTGTT
GTATGAAAACTTTTTCCTTTGATTTGGTTGGATGTTTTTTGTTGTTTTTTCCCTTCATCGAGAC
TTCTCTTGGAACATGAATGTATTGGCCTTGTGGGTAGAACACTTACCCTACCTCTGCCTTCTGT
CGCCTGCCATACACTGATATTCTAATGTATCCTGTGTTTGTCTCTATGCCCCCACCAAAAGGTC
CCAGAAAGAGCCAGTGTTCCTACCGAATGCCTTGGTTTCTGAGTTGGAATTCTGTTGTATGTCC
TCTTTACTTGGCTCTTAGTGTTAGGAAGATGTGGGGCTCAAAAGTGCATTCAGCTATGTTGATA
ATGCTACAGGGCCACATTACAGGTAATACCTTCAGTTGCTTTGGAATGACTACCGTGTTTATTG
ACACCACATAGATGATAACAGTGTGATGAGTTGAATATGTGTACTTCTACCCCCAAGTGAGATA
TTAAAGCTTTCCCCTGGGCCTTGTATGTCCAAAGAGGTTGAGTTGGCTTCTACCTAGACCATAG
GGGAGGAAGCCAGCGGTTTGGTAGATGCAGCAGAAGGAAAAAGGAATGGGAGAGCAGTGGGTTA
CAAACTAACTGCTGAAGGATGGAGGGTTCAAGAGCTATTGAATGTTGAAATCCATTATTCTCAT
GTTTGTTTGGGCTTCTCTACTTAATGGCTTTATTTGACCCTCTTTCCCTTAAAGGTTTAAGTTC
AACCATAATCTGTCAGTTATTGGAGTTTCAGTGGAATCTTGTATTTCTGGTTCATGACAATAAA
TTGTTCTCTCGAATCCA

hide sequence

RefSeq Acc Id:

XM_013508322 ⟹ XP_013363776

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955545	282,342 - 288,302 (+)	NCBI

Sequence:

show sequence

CGTCCGTTCGGGTTTGGCCGGTCCCCGGCCCGTCTGCCGCAGCCGTGGTGGCAGCCCCGGGAGG
AGCACTGGCGTCCGTTTCCTTCGATCCTCGGGATTTGAAGATGGCTGCCCAGTCAGCGCCGAAA
GTTGTGCTAAAAAGCACCACCAAGATGTCTCTAAATGAGCGCTTTACTAATATGCTGAAGAACA
AACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAACAACAGCAGCTAGCCAGTGCCAG
AAACAGAAGACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAG
CAGGTAAAAAATGGACCGTCTGGAGATAGATACTCAAAGGAAAAATGGAGACACTGGCTTCTTT
GACTGAAAAATCAATTTTTTTCTTAATCACGAGAATTCAAATGAACTTGTACTTTAAACTTTGC
CCAATGTGATGAACTTCTTATGGTGTTTGAGTAAGCCTTTGAAGACAGTGGTAGTCCTTGGGCA
GGTATGAATTCGGTCATGTCTTTGTCAACCTGTGGTTCAAAAACAGTGTGTGTACTAAAACGTA
AGTTCCAGCTTGCTGTATATGACTTCTGTATCCAAATAATTGAGGTGATTGTGGTTCTATCAAG
TCCATGGAAACTTACTGAAGCTTAAAGTTTCTGCTCTGGATTAGAATTCTACTTCTTTTAAGTC
AAAGAAAGACTTCTGGTTTGGGATCCTTATGATACCCACTGCAGGTTTATTTCCCAACATACCA
GGTATCTCACTTGCTTTTTTCTCTCCGCACTTGGAATTGCCAAATCTCACTGAATTGCTTTTTT
GATCTCAATCCTCCAACACCTTTTCTTCCAGAAGAGCTTAAAGCAGCGCCTGGGTAAGAGTAAC
ATCCAGGCACGGTTAGGCCGACCCATAGGGGCCCTGGCCAGGGGAGCCATTGGAGGACGAG

hide sequence

RefSeq Acc Id:

XM_013508323 ⟹ XP_013363777

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955545	282,342 - 291,363 (+)	NCBI

Sequence:

show sequence

CGTCCGTTCGGGTTTGGCCGGTCCCCGGCCCGTCTGCCGCAGCCGTGGTGGCAGCCCCGGGAGG
AGCACTGGCGTCCGTTTCCTTCGATCCTCGGGATTTGAAGATGGCTGCCCAGTCAGCGCCGAAA
GTTGTGCTAAAAAGCACCACCAAGATGTCTCTAAATGAGCGCTTTACTAATATGCTGAAGAACA
AACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAACAACAGCAGCTAGCCAGTGCCAG
AAACAGAAGACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAG
CAGGTCGGGGTATGATAGGTCGGGGAAGAGGGGGCTTTGGAGGACGAGGACGAGGACGTGGACG
GGGAAGAGGCGCCCTTACTCGCCCTGTATTGACCAAGGAGCAGCT

hide sequence

Protein Sequences


Protein RefSeqs	XP_005411476	(Get FASTA)	NCBI Sequence Viewer
	XP_005411478	(Get FASTA)	NCBI Sequence Viewer
	XP_005411479	(Get FASTA)	NCBI Sequence Viewer
	XP_005411480	(Get FASTA)	NCBI Sequence Viewer
	XP_005411481	(Get FASTA)	NCBI Sequence Viewer
	XP_005411482	(Get FASTA)	NCBI Sequence Viewer
	XP_013363775	(Get FASTA)	NCBI Sequence Viewer
	XP_013363776	(Get FASTA)	NCBI Sequence Viewer
	XP_013363777	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000004149
	ENSCLAP00000004149.1
	ENSCLAP00000004150
	ENSCLAP00000004150.1

RefSeq Acc Id:	XP_005411478 ⟸ XM_005411421
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2URJ1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIRASMQQQQQLASARNRRLAQQMENRPS VQAALKLKQKSLKQRLGKSNIQARLGRPIGALARGAIGGRGLPIVQRGLPRGGLRGARATRTLL RGGMSLRGQNLLRGGRAVAPRMGLRRGGVRGRGGPGRGGLGRGAMGRGGIGGRGRGMIGRGRGG FGGRGRGRGRGRGALTRPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPETND hide sequence

RefSeq Acc Id:

XP_005411479 ⟸ XM_005411422

- Peptide Label:

isoform X3

- Sequence:

show sequence

MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIRASMQQQQQLASARNRRLAQQMENRPS
VQAALKLKQSLKQRLGKSNIQARLGRPIGALARGAIGGRGLPIVQRGLPRGGLRGARATRTLLR
GGMSLRGQNLLRGGRAVAPRMGLRRGGVRGRGGPGRGGLGRGAMGRGGIGGRGRGMIGRGRGGF
GGRGRGRGRGRGALTRPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPETND

hide sequence

RefSeq Acc Id:

XP_005411476 ⟸ XM_005411419

- Peptide Label:

isoform X1

- Sequence:

show sequence

MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIRASMQQQQQLASARNRRLAQQMENRPS
VQAALKLKQTLYASPDSACGRICPSCGWASEGRCHATKSLKQRLGKSNIQARLGRPIGALARGA
IGGRGLPIVQRGLPRGGLRGARATRTLLRGGMSLRGQNLLRGGRAVAPRMGLRRGGVRGRGGPG
RGGLGRGAMGRGGIGGRGRGMIGRGRGGFGGRGRGRGRGRGALTRPVLTKEQLDNQLDAYMSKT
KGHLDAELDAYMAQTDPETND

hide sequence

RefSeq Acc Id:

XP_005411480 ⟸ XM_005411423

- Peptide Label:

isoform X4

- Sequence:

show sequence

MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIRASMQQQQQLASARNRRLAQQMENRPS
VQAALKLKQTLYASPDSACGRICPSCGWASEGRCHATKSLKQRLGKSNIQARLGRPIGALARGA
IGGRGLPIVQRGLPRGGLRGARATRTLLRGGMSLRGRGMIGRGRGGFGGRGRGRGRGRGALTRP
VLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPETND

hide sequence

RefSeq Acc Id:

XP_005411481 ⟸ XM_005411424

- Peptide Label:

isoform X6

- Sequence:

show sequence

MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIRASMQQQQQLASARNRRLAQQMENRPS
VQAALKLKQSLKQRLGKSNIQARLGRPIGALARGAIGGRGLPIVQRGLPRGGLRGARATRTLLR
GGMSLRGRGMIGRGRGGFGGRGRGRGRGRGALTRPVLTKEQLDNQLDAYMSKTKGHLDAELDAY
MAQTDPETND

hide sequence

RefSeq Acc Id:	XP_005411482 ⟸ XM_005411425
- Peptide Label:	isoform X7
- Sequence:	show sequence MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIRASMQQQQQLASARNRRLAQQMENRPS VQAALKLKQTLYASPDSACGRICPSCGWASEGRCHATVKNGPSGDRYSKEKWRHWLL hide sequence

RefSeq Acc Id:	XP_013363775 ⟸ XM_013508321
- Peptide Label:	isoform X5
- UniProtKB:	A0A8C2YJX5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIRASMQQQQQLASARNRRLAQQMENRPS VQAALKLKQKSLKQRLGKSNIQARLGRPIGALARGAIGGRGLPIVQRGLPRGGLRGARATRTLL RGGMSLRGRGMIGRGRGGFGGRGRGRGRGRGALTRPVLTKEQLDNQLDAYMSKTKGHLDAELDA YMAQTDPETND hide sequence

RefSeq Acc Id:	XP_013363777 ⟸ XM_013508323
- Peptide Label:	isoform X9
- Sequence:	show sequence MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIRASMQQQQQLASARNRRLAQQMENRPS VQAALKLKQVGV hide sequence

RefSeq Acc Id:	XP_013363776 ⟸ XM_013508322
- Peptide Label:	isoform X8
- Sequence:	show sequence MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIRASMQQQQQLASARNRRLAQQMENRPS VQAALKLKQVKNGPSGDRYSKEKWRHWLL hide sequence

Ensembl Acc Id:

ENSCLAP00000004150 ⟸ ENSCLAT00000004231

Ensembl Acc Id:

ENSCLAP00000004149 ⟸ ENSCLAT00000004230

Protein Domains

Chromatin target of PRMT1 protein C-terminal

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000002957	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000004230	ENTREZGENE
	ENSCLAT00000004230.1	UniProtKB/TrEMBL
	ENSCLAT00000004231	ENTREZGENE
	ENSCLAT00000004231.1	UniProtKB/TrEMBL
InterPro	CTOP_PRMT1	UniProtKB/TrEMBL
	FoP_C	UniProtKB/TrEMBL
NCBI Gene	Chtop	ENTREZGENE
PANTHER	CHROMATIN TARGET OF PRMT1 PROTEIN	UniProtKB/TrEMBL
	CHROMATIN TARGET OF PRMT1 PROTEIN	UniProtKB/TrEMBL
Pfam	FoP_duplication	UniProtKB/TrEMBL
SMART	FoP_duplication	UniProtKB/TrEMBL
UniProt	A0A8C2URJ1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2YJX5	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar