| Gene: Tmem185b (transmembrane protein 185B) Chinchilla lanigera |
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Analyze |
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| Symbol: |
Tmem185b |
| Name: |
transmembrane protein 185B |
| RGD ID: |
8750651 |
| Description: |
ASSOCIATED WITH genetic disease (ortholog) |
| Type: |
protein-coding
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| RefSeq Status: |
MODEL |
| RGD Orthologs |
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| Alliance Genes |
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| More Info |
more info ...
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| More Info |
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| Latest Assembly: |
ChiLan1.0 - Chinchilla ChiLan1.0 Assembly |
| Position: |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 | NW_004955459 | 9,610,905 - 9,613,405 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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| JBrowse: |
View Region in Genome Browser (JBrowse)
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| Model |
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Imported Disease Annotations - ClinVar
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References
Genomics
Comparative Map Data
Tmem185b
(Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 | NW_004955459 | 9,610,905 - 9,613,405 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TMEM185B
(Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 2 | 120,217,479 - 120,223,400 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 120,217,479 - 120,223,400 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 2 | 120,975,055 - 120,980,976 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 120,695,324 - 120,697,454 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 2 | 114,305,701 - 114,307,831 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | q14.2 | NCBI | | | | | HuRef | 2 | 113,298,822 - 113,304,759 (-) | NCBI | | HuRef | | | CHM1_1 | 2 | 120,979,441 - 120,985,378 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 120,652,239 - 120,658,160 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Tmem185b
(Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 1 | 119,453,884 - 119,456,713 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 1 | 119,453,890 - 119,456,713 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 1 | 119,526,154 - 119,528,983 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 1 | 119,526,160 - 119,528,983 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 1 | 121,422,744 - 121,424,803 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 1 | 121,353,713 - 121,355,772 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 1 | 122,184,964 - 122,187,094 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | E2.3 | NCBI | | | | | cM Map | 1 | 52.31 | NCBI | | | | |
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Tmem185b
(Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 13 | 33,200,329 - 33,203,660 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 13 | 30,647,533 - 30,650,864 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 13 | 30,647,482 - 30,650,858 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 13 | 33,228,893 - 33,232,226 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 13 | 34,516,732 - 34,520,065 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 13 | 31,790,854 - 31,794,186 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 13 | 35,554,621 - 35,557,952 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 13 | 35,554,964 - 35,556,016 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 13 | 40,669,220 - 40,672,564 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 13 | 32,276,974 - 32,279,005 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 13 | 32,280,108 - 32,281,829 (+) | NCBI | | | | | Celera | 13 | 30,543,175 - 30,546,506 (+) | NCBI | | Celera | | | Cytogenetic Map | 13 | q11 | NCBI | | | | |
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TMEM185B
(Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 13 | 22,219,290 - 22,225,355 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2B | 22,238,267 - 22,240,349 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2B | 7,149,925 - 7,155,857 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2B | 120,725,913 - 120,731,687 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
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TMEM185B
(Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 19 | 29,892,735 - 29,894,526 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 19 | 30,149,219 - 30,151,009 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 19 | 31,268,313 - 31,270,107 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 19 | 31,268,280 - 31,270,103 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 19 | 29,954,584 - 29,956,373 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 19 | 30,123,872 - 30,125,662 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 19 | 31,309,974 - 31,311,768 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Tmem185b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405303 | 91,308,751 - 91,314,210 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936469 | 50,303,976 - 50,305,028 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936469 | 50,303,513 - 50,306,321 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TMEM185B
(Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 15 | 31,141,126 - 31,142,181 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 15 | 31,140,283 - 31,146,656 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 15 | 36,617,474 - 36,619,775 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TMEM185B
(Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 10 | 10,068,817 - 10,070,996 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 10 | 10,069,244 - 10,070,296 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666061 | 12,616,649 - 12,619,722 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Tmem185b
(Heterocephalus glaber - naked mole-rat) |
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Expression
Sequence
| RefSeq Acc Id: |
XM_005397652 ⟹ XP_005397709 |
| Type: |
CODING |
| Position: |
| Chinchilla Assembly | Chr | Position (strand) | Source |
|---|
ChiLan1.0 | NW_004955459 | 9,610,905 - 9,613,405 (+) | NCBI |
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| Sequence: |
GGCTTCCCCGAGACGGCGGCGACGTGGGCGCAGAGCGGCGTGAGCGGCGGGCTCGGGTGGGCGG
GCGGCAGCCTACGCCATGAACCCCAGGGGACTGTTCCAGGACTTCAACCCGAGTAAGTTCCTCA
TCTACGCCTGCCTTCTGCTCTTCTCGGTATTGCTGCCCCTCCGCCTGGACGGCGTCATCCAGTG
GAGCTACTGGGCCGTCTTTGCCCCCATATGGCTGTGGAAGCTCCTGGTCATCGCGGGTGCCTCG
GTGGGTGCGGGCGTTTGGGCTCGCAACCCTCGCTACCGCACCGAGGGGGAGGCCGGCGTGGAGT
TCAAAGCCATGCTGATCGCCGTGGGCATCCACCTGCTGCTACTCATGTTCGAAGTCCTGGTCTG
TGACCGGGTGGAGAGGGGCACCCACTTCTGGCTGCTGGTCTTCATGCCGCTCTTCTTCGTTTCC
CCGGTGTCCGTAGCTGCTTGTGTCTGGGGCTTTCGACACGACAGGTCGCTGGAGCTAGAGATCT
TGTGCTCCGTCAACATCCTGCAGTTCATCTTCATCGCCCTGAGGCTGGACAGGATTATCCACTG
GCCGTGGCTGGTGGTGTTCGTGCCCCTGTGGATCCTCATGTCCTTCCTTTGCCTGGTTGTCCTC
TATTACATCGTCTGGTCCCTCCTGTTTCTGAGGTCCCTGGATGTGGTTGCAGAACAGCGAAGGA
CACACGTGACCATGGCTATCAGCTGGATAACGATTGTTGTGCCCCTGCTCACTTTTGAGGTCCT
GCTGGTTCACAGGTTGGATAGCCACAATACATTCTCTTACATCTCCATATTTGTTCCCCTCTGG
CTGTCTTTAGTAACTTTGATGGCCACAACATTTAGACGGAAAGGAGGCAATCATTGGTGGTTTG
GCATTCGCAGAGATTTCTGTCAGTTTCTGCTTGAAATTTTCCCATTTTTAAGAGAATATGGGAA
CATTTCCTATGATCTCCATCATGAAGACAGTGAAGATGCTGAGGAAACATCCGGTTCAGAAGCT
CCAAAAATTCCTCCAATGTTTGGAAAGAAAGCCAGGGTAGTTATAACGCAGAGCCCTGGGAAAT
ATGTTCCCCCGCCTCCCAAGTTAAATATTGATATGCCGGACTAAAACTGCCTTCCTCACTGGCC
CTTTGGTGAGCTGGAAACAACCAACTCCACCTTGCTTTTGCCACTTTATTCATCCCAAACCCGA
AACCACAAGCAGGCTCCAAACACCATTTCACGACTTGAGATCGATGCGGATTAGTGACTCATCA
TTGTCTCCTGTAGATAGCAGGGGTTAGTTTTGTCTTTGGTTTTGTGTGTATGTTGTATGTATGT
GTGAGAGAACTCCTGTTTGCTTTCCAAATAGGTCTTTAAGAGCTAGCCAGGGGCAGTAGGTGGA
ATTGTTTTAGTAGGTCCTCAAAAGGAGTAACTACACAGTTTGTTTTGTTTTTTTTAAAGGTCTA
CTACACCTATTAAAAGTATTGTTTAAAAAATATTTTTATATACGGCTAGTCTAAAATTGTATGT
GAGATTGTACCTGTTGTGGCAGAATAACAAATGTACAGAATTCTCTTTCCCGCCGCTGGTTTAT
AAGCCTTGCAGTTATTTCTAGTGTTCCTACTGTTAAAATAGTTCTTCTTTGGACATTGCTTTGG
TCGTGAATTGTCTTTAATATTCAAATAGATGAACTTTTCTAATGGCGTGAATCTGTGCATATAT
GAATATTTTAGCAGTGTAATGTGTTGAATTCCAGTTCTCTGCAGTACAAAGTATTATGTTAAAG
TATTTTTTTACGTTTCTACGTGAAGATACATGTTTATTGCAGGTGTCCTCAGAGTGCATAAAAT
GTTCATATATACCTCTTATGGGGTCAAATCTAAGTACCAGGCACAAAGCAGGGATTGGAAATCC
CATGGGTCTGAATATTCAGGTATTCGGTGACCGGTCTGCACAGTTCTGCAGTCTGTCTCAGTAA
CTGTTCGGAGCCACCACCCTTTGGGAGCAGGTGACACCCTCCAGTGTGGAACCAGGTCCTAACG
TGACTTATTTACCATTTTTCTCCAGAGGTGATAACATCTCTTGAGGAACAACTAAAGTAAGCAA
AGAGTGGTTTGTCATATCTAAGGATCTTGGAATATTTGGTTGTCATAAAGTAAAGCATTACTTA
TCACTGGAAAGCAGGATGGAGTGACCTTAACCAAAAGTAGCCAAACAAGATGTCTTATTTTAAG
GTCCAAACTTTTGTGGTTGTCAGCAACAGGGAAGCAGTAGTTTGGGTTACCTTTTTAGGGTAAG
TACGATGTATCTTTAAGTGCTGGTGGGATGCAGGGAACCAGAAGGGCAGAAGCCAGGTTCTATG
AGAGTAATGTTGTGGCTAGAACAAATAAATACTTTCAGAAGGAGGTTTAGGTGGAAAGCAGTAC
TGATATTTCTGGGGAAGGCTGTTGGGAACCCACTGGTATTGACAACTTATTAAAAGTTACCTCA
AGTGA
hide sequence
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| RefSeq Acc Id: |
XP_005397709 ⟸ XM_005397652 |
| - Sequence: |
MNPRGLFQDFNPSKFLIYACLLLFSVLLPLRLDGVIQWSYWAVFAPIWLWKLLVIAGASVGAGV
WARNPRYRTEGEAGVEFKAMLIAVGIHLLLLMFEVLVCDRVERGTHFWLLVFMPLFFVSPVSVA
ACVWGFRHDRSLELEILCSVNILQFIFIALRLDRIIHWPWLVVFVPLWILMSFLCLVVLYYIVW
SLLFLRSLDVVAEQRRTHVTMAISWITIVVPLLTFEVLLVHRLDSHNTFSYISIFVPLWLSLVT
LMATTFRRKGGNHWWFGIRRDFCQFLLEIFPFLREYGNISYDLHHEDSEDAEETSGSEAPKIPP
MFGKKARVVITQSPGKYVPPPPKLNIDMPD
hide sequence
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Additional Information
External Database Links
| Database |
Acc Id |
Source(s) |
| NCBI Gene |
Tmem185b |
ENTREZGENE |
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