E4f1 (E4F transcription factor 1)

Gene: E4f1 (E4F transcription factor 1) Chinchilla lanigera

Analyze

Symbol:

E4f1

Name:

E4F transcription factor 1

RGD ID:

8750004

Description:

ENCODES a protein that exhibits cAMP response element binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN DNA replication (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); developmental and epileptic encephalopathy 1 (ortholog); endometrial carcinoma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

transcription factor E4F1

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955442	15,030,363 - 15,041,877 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955442	15,031,210 - 15,041,437 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant polycystic kidney disease (ISO)

developmental and epileptic encephalopathy 1 (ISO)

endometrial carcinoma (ISO)

epilepsy (ISO)

genetic disease (ISO)

idiopathic generalized epilepsy (ISO)

Neoplastic Cell Transformation (ISO)

short-rib thoracic dysplasia 9 with or without polydactyly (ISO)

tuberous sclerosis 2 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA replication (ISO)

negative regulation of transcription by RNA polymerase II (ISO)

positive regulation of transcription by RNA polymerase II (ISO)

regulation of cell cycle process (ISO)

regulation of mitotic cell cycle, embryonic (ISO)

Cellular Component

nuclear body (ISO)

nucleoplasm (ISO)

nucleus (ISO)

spindle (ISO)

Molecular Function

cAMP response element binding (ISO)

DNA binding (ISO)

DNA-binding transcription activator activity, RNA polymerase II-specific (ISO)

DNA-binding transcription repressor activity, RNA polymerase II-specific (ISO)

protein binding (ISO)

RNA polymerase II transcription regulatory region sequence-specific DNA binding (ISO)

RNA polymerase II-specific DNA-binding transcription factor binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

p53 signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

E4f1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955442	15,030,363 - 15,041,877 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955442	15,031,210 - 15,041,437 (-)	NCBI	ChiLan1.0	ChiLan1.0

E4F1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	2,223,591 - 2,235,742 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	2,223,580 - 2,235,742 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	2,273,592 - 2,285,743 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	2,213,568 - 2,225,744 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	2,213,589 - 2,225,743	NCBI
Celera	16	2,487,988 - 2,500,164 (+)	NCBI		Celera
Cytogenetic Map	16	p13.3	NCBI
HuRef	16	2,199,659 - 2,211,835 (+)	NCBI		HuRef
CHM1_1	16	2,273,496 - 2,285,692 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	16	2,245,946 - 2,258,191 (+)	NCBI		T2T-CHM13v2.0

E4f1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	24,662,752 - 24,674,366 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	24,662,752 - 24,689,287 (-)	Ensembl		GRCm39 Ensembl
GRCm38	17	24,443,778 - 24,455,392 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	24,443,778 - 24,470,313 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	24,580,724 - 24,592,256 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	24,171,379 - 24,182,911 (-)	NCBI		MGSCv36	mm8
Celera	17	24,958,270 - 24,969,970 (-)	NCBI		Celera
Cytogenetic Map	17	A3.3	NCBI
cM Map	17	12.39	NCBI

E4f1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	13,978,975 - 13,999,646 (-)	NCBI		GRCr8
mRatBN7.2	10	13,471,478 - 13,495,018 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	13,474,456 - 13,485,974 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	18,220,916 - 18,232,399 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	17,709,761 - 17,721,244 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	13,208,946 - 13,220,429 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	13,812,335 - 13,835,847 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	13,815,293 - 13,826,945 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	13,629,321 - 13,644,753 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	13,701,558 - 13,713,008 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	13,698,967 - 13,713,008 (-)	NCBI
Celera	10	13,154,954 - 13,166,469 (-)	NCBI		Celera
Cytogenetic Map	10	q12	NCBI

E4F1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	2,724,616 - 2,737,612 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	6,505,600 - 6,518,512 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	1,080,205 - 1,092,996 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	2,323,461 - 2,335,695 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	2,323,461 - 2,335,695 (+)	Ensembl	panpan1.1		panPan2

E4F1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	38,743,346 - 38,752,427 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	38,743,355 - 38,752,403 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	39,982,727 - 39,991,786 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	39,051,930 - 39,060,985 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	39,051,930 - 39,065,832 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	38,736,943 - 38,745,997 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	38,709,267 - 38,718,322 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	39,187,987 - 39,197,042 (-)	NCBI		UU_Cfam_GSD_1.0

E4f1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	104,879,637 - 104,898,330 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936694	1,809,882 - 1,829,157 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936694	1,811,131 - 1,829,193 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

E4F1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	39,761,356 - 39,772,262 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	39,757,679 - 39,773,024 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	42,408,014 - 42,418,803 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

E4F1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	2,117,936 - 2,130,787 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	2,117,479 - 2,130,623 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666068	28,928,785 - 28,941,473 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

E4f1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624824	38,146 - 49,019 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624824	38,062 - 50,183 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005391435	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005391436	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005391437	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005391438	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013517726	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013517727	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013517728	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01037854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCQ01125643	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000021287 ⟹ ENSCLAP00000021086

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955442	15,030,363 - 15,041,877 (-)	Ensembl

RefSeq Acc Id:

XM_005391435 ⟹ XP_005391492

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955442	15,031,210 - 15,041,436 (-)	NCBI

Sequence:

show sequence

TTATGACGACACAGTCGTAAATCCGCCATCTTTCTGTGGCGCGTTGCGACATGGAGGGCGCGAT
GGCAGTGCGGGTGACGGCCGCTCATACGGCAGAAGCCCGGGCCGAAGCCGGTCGTGAAGCGGGT
GAGGGCGGGGTCGCAGCAGCGGCTTCGGCCCCCGGCGGCTTCTTTGGCCTTCCAGCGCCCTTCG
GCGAGGAAGATGAGGATGACGTGCACAGATGTGGCCGCTGCCAGGTGGAATTTACTGCCTTGGA
AGACTTTGTTCACCACAAGATTCAAAAGGCCTGCCAGCGGGCCCCTCCGGAAGCCCTGCATGCC
CCCTCTGCTACCACCACACTCTTGGGCCAGGAGGTGGTGCCAACGGCAGCAGGCCCAGAAGAAC
CCATCACTGTGGCCCACATTGTGGTGGAGGCAGCCTCTCTGGCAACAGACATCAGCCATGCTCC
TGACCTTGTTGGCAGTGGACATATTAAAGAGGTCATCGTGGCTGCTGATGCAGAGCCAGGGGAC
ACTGAGATGGCAGAGGCCCCGGGTAGTCCCAGCCATCAGGGGATTGAGCTTGCTGTGGAGGGTG
AGCAGGCACAGGCCAAGCTGCTGGTGAACAAGGATGGCCGCTACGTGTGCATGCTGTGTCACAA
GACCTTCAAGACGGGCAGCATCCTCAAGGCCCACATGGTCACCCACAGCAGCCGCAAGGACCAC
GAGTGCAAGCTCTGCGGGGCCTCCTTTCGGACTAAGGGCTCACTCATCCGGCACCACCGGAGGC
ACACAGATGAGCGTCCATATAAGTGTGCCAAGTGTGGGAAGAGCTTCCGGGAGTCTGGAGCGCT
AACGAGGCACCTCAAGTCTCTCACTCCATGCACAGAAAAAATTCGCTTCACCATGAGCAAGGAT
GTGGTTGTGGGCAAAGAAGATATGCCTACAGGCTCAGGTGCCTCCACCGTGGGGACAGTTACAT
CTTCATCAGTGACAGGCGAGCCTGTGGAGACATCGCCGGTGATTCATCTGGTGACAGATGCCAA
GGGCACTGTCATCCATGAAGTCCATGTCCAGATGCAGGAACTGCCGTTGGGCATGAAACCCCTG
GCCCCAGAGCCTCCAGACCCCGAGGAGCTTCCTTGTTCTAGTGAGGGCAGCCGTGAAAACCTTT
TGCACCAGGCTATACAGAATTCTGGCATTGTTCTTGAGCGGGTCACTGGGGAGGAAAGTGCCCT
TGAGCCGGCCCCAACCTCTGGGTCTAGTCCGCAGCCCCTGGGAGATGGACCTTCAGAACTCCCA
CTATTGGAGGTGGAGCAGATGGAGACACAGGTGGCCAGTGAGGCTTCCACTGTGCCCAGGACGC
ACCCATGTCCTCAATGCAGTGAGACCTTCCCAACAGCAGCCACCCTGGAGGCTCACAAGAGAGG
CCATGCAGGGCCGAGGCCGTTCCCCTGTGCACAGTGTGGCAAGGCCTTTCCCAAGGCCTACCTG
CTCAAGAAACACCAGGAGGTGCATGTGCACGAGCGCCGCTTCCGCTGCGGGGACTGTGGGAAGC
TGTACAAGACCATCGCCCATGTGCGTGGCCACCGGCGCGTCCACTCCGATGAGCGGCCCTTCCC
TTGTCCCCAGTGTGGCAAGCGCTACAAGACTAAGAATGCCCAGCAGGTGCACTTCCGGACACAC
TTGGAGGAGAAGCCACACGTGTGCCAGTTCTGCAGCCGAGGCTTCCGAGAGAAGGGGTCACTGG
TGCGGCATGTGCGGCACCACACAGGCGAGAAGCCCTTCAAGTGCTACAAGTGTGGCCGTGGTTT
TGCTGAGCATGGCACGCTTAACCGGCACCTGCGTACCAAAGGGGGCTGCCTACTGGAGGTGGAG
GAATTGCTGGTGTCTGAGGAGAGCCCCTCAGCAGCTGCCACTGTGCTGGCTGAGGACCCCCACA
CTGTGCTGGTGGAGTTCTCATCTGTGGTGGCTGACACGCAAGAATACATCATTGAGGCCACTGC
AGATGATGCGGAGACCAGTGAAGCTACAGAGGTTATCGAGGGCACCCAGACAGAGGTGGACAGC
CACATCATGAAGGTGGTACAGCAGATTGTGCACCAGGCCAGTGCTGGGCACCAGATCATTGTGC
AGAATGTGACCGTGGACCAGGAGGCAGGGCTGGGCTCGGAGGCAGCCTCTGCAGACACCATCAC
CATTGCCACCCCTGAGAGCTTGACAGAACAAGTGGCCATGACCCTGGCCTCAGCTATCAGTGAG
GGTACTGTGCTTGCAGCCCGCACAAGCTCAAATGGCACTGAACAGGCCACTGTGACAATGGTGT
CATCAGAGGACATCGAGATCCTTGAGCATGCAGGCGAGCTGGTCATTGCTTCACCAGAGGGCCC
GCTTGAGGTGCAGACAGTCATTGTCTAGCATGGAGCCTGTAGGGTCCCATTGGGCTGGGGCTGG
GGCAGTGGCAGGGGCAGGGGCAGTGGTAAGGACCCTCAGTGCCCATCTATGCCTGCCTGCTCTG
GTAGAAAAGACAGCCCAGAGTTTCAGGCATCCAAAGGAGATGGTATGTAAATATGTGGAAGTCT
TTTGTTGCTTTACAATAAAACATGAAAACTTGCA

hide sequence

RefSeq Acc Id:

XM_005391436 ⟹ XP_005391493

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955442	15,031,210 - 15,041,436 (-)	NCBI

Sequence:

show sequence

TTATGACGACACAGTCGTAAATCCGCCATCTTTCTGTGGCGCGTTGCGACATGGAGGGCGCGAT
GGCAGTGCGGGTGACGGCCGCTCATACGGCAGAAGCCCGGGCCGAAGCCGGTCGTGAAGCGGGT
GAGGGCGGGGTCGCAGCAGCGGCTTCGGCCCCCGGCGGCTTCTTTGGCCTTCCAGCGCCCTTCG
GCGAGGAAGATGAGGATGACGTGCACAGATGTGGCCGCTGCCAGGTGGAATTTACTGCCTTGGA
AGACTTTGTTCACCACAAGATTCAAAAGGCCTGCCAGCGGGCCCCTCCGGAAGCCCTGCATGCC
CCCTCTGCTACCACCACACTCTTGGGCCAGGAGGTGGTGCCAACGGCAGCAGGCCCAGAAGAAC
CCATCACTGTGGCCCACATTGTGGTGGAGGCAGCCTCTCTGGCAACAGACATCAGCCATGCTCC
TGACCTTGTTGGCAGTGGACATATTAAAGAGGTCATCGTGGCTGCTGATGCAGAGCCAGGGGAC
ACTGAGATGGCAGAGGCCCCGGGTAGTCCCAGCCATCAGGGGATTGAGCTTGCTGTGGAGGGTG
AGCAGGCACAGGCCAAGCTGCTGGTGAACAAGGATGGCCGCTACGTGTGCATGCTGTGTCACAA
GACCTTCAAGACGGGCAGCATCCTCAAGGCCCACATGGTCACCCACAGCAGCCGCAAGGACCAC
GAGTGCAAGCTCTGCGGGGCCTCCTTTCGGACTAAGGGCTCACTCATCCGGCACCACCGGAGGC
ACACAGATGAGCGTCCATATAAGTGTGCCAAGTGTGGGAAGAGCTTCCGGGAGTCTGGAGCGCT
AACGAGGCACCTCAAGTCTCTCACTCCATGCACAGAAAAAATTCGCTTCACCATGAGCAAGGAT
GTGGTTGTGGGCAAAGAAGATATGCCTACAGGCTCAGGTGCCTCCACCGTGGGGACAGTTACAT
CTTCATCAGTGACAGGCGAGCCTGTGGAGACATCGCCGGTGATTCATCTGGTGACAGATGCCAA
GGGCACTGTCATCCATGAAGTCCATGTCCAGATGCAGGAACTGCCGTTGGGCATGAAACCCCTG
GCCCCAGAGCCTCCAGACCCCGAGGAGCTTCCTTGTTCTAGTGAGGGCAGCCGTGAAAACCTTT
TGCACCAGGCTATACAGAATTCTGGCATTGTTCTTGAGCGGGTCACTGGGGAGGAAAGTGCCCT
TGAGCCGGCCCCAACCTCTGGGTCTAGTCCGCAGCCCCTGGGAGATGGACCTTCAGAACTCCCA
CTATTGGAGGTGGAGCAGATGGAGACAGTGGCCAGTGAGGCTTCCACTGTGCCCAGGACGCACC
CATGTCCTCAATGCAGTGAGACCTTCCCAACAGCAGCCACCCTGGAGGCTCACAAGAGAGGCCA
TGCAGGGCCGAGGCCGTTCCCCTGTGCACAGTGTGGCAAGGCCTTTCCCAAGGCCTACCTGCTC
AAGAAACACCAGGAGGTGCATGTGCACGAGCGCCGCTTCCGCTGCGGGGACTGTGGGAAGCTGT
ACAAGACCATCGCCCATGTGCGTGGCCACCGGCGCGTCCACTCCGATGAGCGGCCCTTCCCTTG
TCCCCAGTGTGGCAAGCGCTACAAGACTAAGAATGCCCAGCAGGTGCACTTCCGGACACACTTG
GAGGAGAAGCCACACGTGTGCCAGTTCTGCAGCCGAGGCTTCCGAGAGAAGGGGTCACTGGTGC
GGCATGTGCGGCACCACACAGGCGAGAAGCCCTTCAAGTGCTACAAGTGTGGCCGTGGTTTTGC
TGAGCATGGCACGCTTAACCGGCACCTGCGTACCAAAGGGGGCTGCCTACTGGAGGTGGAGGAA
TTGCTGGTGTCTGAGGAGAGCCCCTCAGCAGCTGCCACTGTGCTGGCTGAGGACCCCCACACTG
TGCTGGTGGAGTTCTCATCTGTGGTGGCTGACACGCAAGAATACATCATTGAGGCCACTGCAGA
TGATGCGGAGACCAGTGAAGCTACAGAGGTTATCGAGGGCACCCAGACAGAGGTGGACAGCCAC
ATCATGAAGGTGGTACAGCAGATTGTGCACCAGGCCAGTGCTGGGCACCAGATCATTGTGCAGA
ATGTGACCGTGGACCAGGAGGCAGGGCTGGGCTCGGAGGCAGCCTCTGCAGACACCATCACCAT
TGCCACCCCTGAGAGCTTGACAGAACAAGTGGCCATGACCCTGGCCTCAGCTATCAGTGAGGGT
ACTGTGCTTGCAGCCCGCACAAGCTCAAATGGCACTGAACAGGCCACTGTGACAATGGTGTCAT
CAGAGGACATCGAGATCCTTGAGCATGCAGGCGAGCTGGTCATTGCTTCACCAGAGGGCCCGCT
TGAGGTGCAGACAGTCATTGTCTAGCATGGAGCCTGTAGGGTCCCATTGGGCTGGGGCTGGGGC
AGTGGCAGGGGCAGGGGCAGTGGTAAGGACCCTCAGTGCCCATCTATGCCTGCCTGCTCTGGTA
GAAAAGACAGCCCAGAGTTTCAGGCATCCAAAGGAGATGGTATGTAAATATGTGGAAGTCTTTT
GTTGCTTTACAATAAAACATGAAAACTTGCA

hide sequence

RefSeq Acc Id:

XM_005391437 ⟹ XP_005391494

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955442	15,031,210 - 15,041,436 (-)	NCBI

Sequence:

show sequence

TTATGACGACACAGTCGTAAATCCGCCATCTTTCTGTGGCGCGTTGCGACATGGAGGGCGCGAT
GGCAGTGCGGGTGACGGCCGCTCATACGGCAGAAGCCCGGGCCGAAGCCGGTCGTGAAGCGGGT
GAGGGCGGGGTCGCAGCAGCGGCTTCGGCCCCCGGCGGCTTCTTTGGCCTTCCAGCGCCCTTCG
GCGAGGAAGATGAGGATGACGTGCACAGATGTGGCCGCTGCCAGGTGGAATTTACTGCCTTGGA
AGACTTTGTTCACCACAAGATTCAAAAGGCCTGCCAGCGGGCCCCTCCGGAAGCCCTGCATGCC
CCCTCTGCTACCACCACACTCTTGGGCCAGGAGGTGGTGCCAACGGCAGCAGGCCCAGAAGAAC
CCATCACTGTGGCCCACATTGTGGTGGAGGCAGCCTCTCTGGCAACAGACATCAGCCATGCTCC
TGACCTTGTTGGCAGTGGACATATTAAAGAGGTCATCGTGGCTGCTGATGCAGAGCCAGGGGAC
ACTGAGATGGCAGAGGCCCCGGGTAGTCCCAGCCATCAGGGGATTGAGCTTGCTGTGGAGGGTG
AGCAGGCACAGGCCAAGCTGCTGGTGAACAAGGATGGCCGCTACGTGTGCATGCTGTGTCACAA
GACCTTCAAGACGGGCAGCATCCTCAAGGCCCACATGGTCACCCACAGCAGCCGCAAGGACCAC
GAGTGCAAGCTCTGCGGGGCCTCCTTTCGGACTAAGGGCTCACTCATCCGGCACCACCGGAGGC
ACACAGATGAGCGTCCATATAAGTGTGCCAAGTGTGGGAAGAGCTTCCGGGAGTCTGGAGCGCT
AACGAGGCACCTCAAGTCTCTCACTCCATGCACAGAAAAAATTCGCTTCACCATGAGCAAGGAT
GTGGTTGTGGGCAAAGAAGATATGCCTACAGGTCAGCATGGCTCAGGTGCCTCCACCGTGGGGA
CAGTTACATCTTCATCAGTGACAGGCGAGCCTGTGGAGACATCGCCGGTGATTCATCTGGTGAC
AGATGCCAAGGGCACTGTCATCCATGAAGTCCATGTCCAGATGCAGGAACTGCCGTTGGGCATG
AAACCCCTGGCCCCAGAGCCTCCAGACCCCGAGGAGCTTCCTTGTTCTAGTGAGGGCAGCCGTG
AAAACCTTTTGCACCAGGCTATACAGAATTCTGGCATTGTTCTTGAGCGGGTCACTGGGGAGGA
AAGTGCCCTTGAGCCGGCCCCAACCTCTGGGTCTAGTCCGCAGCCCCTGGGAGATGGACCTTCA
GAACTCCCACTATTGGAGGTGGAGCAGATGGAGACACAGGTGGCCAGTGAGGCTTCCACTGTGC
CCAGGACGCACCCATGTCCTCAATGCAGTGAGACCTTCCCAACAGCAGCCACCCTGGAGGCTCA
CAAGAGAGGCCATGCAGGGCCGAGGCCGTTCCCCTGTGCACAGTGTGGCAAGGCCTTTCCCAAG
GCCTACCTGCTCAAGAAACACCAGGAGGTGCATGTGCACGAGCGCCGCTTCCGCTGCGGGGACT
GTGGGAAGCTGTACAAGACCATCGCCCATGTGCGTGGCCACCGGCGCGTCCACTCCGATGAGCG
GCCCTTCCCTTGTCCCCAGTGTGGCAAGCGCTACAAGACTAAGAATGCCCAGCAGGTGCACTTC
CGGACACACTTGGAGGAGAAGCCACACGTGTGCCAGTTCTGCAGCCGAGGCTTCCGAGAGAAGG
GGTCACTGGTGCGGCATGTGCGGCACCACACAGGCGAGAAGCCCTTCAAGTGCTACAAGTGTGG
CCGTGGTTTTGCTGAGCATGGCACGCTTAACCGGCACCTGCGTACCAAAGGGGGCTGCCTACTG
GAGGTGGAGGAATTGCTGGTGTCTGAGGAGAGCCCCTCAGCAGCTGCCACTGTGCTGGCTGAGG
ACCCCCACACTGTGCTGGTGGAGTTCTCATCTGTGGTGGCTGACACGCAAGAATACATCATTGA
GGCCACTGCAGATGATGCGGAGACCAGTGAAGCTACAGAGGTTATCGAGGGCACCCAGACAGAG
GTGGACAGCCACATCATGAAGGTGGTACAGCAGATTGTGCACCAGGCCAGTGCTGGGCACCAGA
TCATTGTGCAGAATGTGACCGTGGACCAGGAGGCAGGGCTGGGCTCGGAGGCAGCCTCTGCAGA
CACCATCACCATTGCCACCCCTGAGAGCTTGACAGAACAAGTGGCCATGACCCTGGCCTCAGCT
ATCAGTGAGGGTACTGTGCTTGCAGCCCGCACAAGCTCAAATGGCACTGAACAGGCCACTGTGA
CAATGGTGTCATCAGAGGACATCGAGATCCTTGAGCATGCAGGCGAGCTGGTCATTGCTTCACC
AGAGGGCCCGCTTGAGGTGCAGACAGTCATTGTCTAGCATGGAGCCTGTAGGGTCCCATTGGGC
TGGGGCTGGGGCAGTGGCAGGGGCAGGGGCAGTGGTAAGGACCCTCAGTGCCCATCTATGCCTG
CCTGCTCTGGTAGAAAAGACAGCCCAGAGTTTCAGGCATCCAAAGGAGATGGTATGTAAATATG
TGGAAGTCTTTTGTTGCTTTACAATAAAACATGAAAACTTGCA

hide sequence

RefSeq Acc Id:

XM_005391438 ⟹ XP_005391495

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955442	15,031,210 - 15,041,436 (-)	NCBI

Sequence:

show sequence

TTATGACGACACAGTCGTAAATCCGCCATCTTTCTGTGGCGCGTTGCGACATGGAGGGCGCGAT
GGCAGTGCGGGTGACGGCCGCTCATACGGCAGAAGCCCGGGCCGAAGCCGGTCGTGAAGCGGGT
GAGGGCGGGGTCGCAGCAGCGGCTTCGGCCCCCGGCGGCTTCTTTGGCCTTCCAGCGCCCTTCG
GCGAGGAAGATGAGGATGACGTGCACAGATGTGGCCGCTGCCAGGTGGAATTTACTGCCTTGGA
AGACTTTGTTCACCACAAGATTCAAAAGGCCTGCCAGCGGGCCCCTCCGGAAGCCCTGCATGCC
CCCTCTGCTACCACCACACTCTTGGGCCAGGAGGTGGTGCCAACGGCAGCAGGCCCAGAAGAAC
CCATCACTGTGGCCCACATTGTGGTGGAGGCAGCCTCTCTGGCAACAGACATCAGCCATGCTCC
TGACCTTGTTGGCAGTGGACATATTAAAGAGGTCATCGTGGCTGCTGATGCAGAGCCAGGGGAC
ACTGAGATGGCAGAGGCCCCGGGTAGTCCCAGCCATCAGGGGATTGAGCTTGCTGTGGAGGGTG
AGCAGGCACAGGCCAAGCTGCTGGTGAACAAGGATGGCCGCTACGTGTGCATGCTGTGTCACAA
GACCTTCAAGACGGGCAGCATCCTCAAGGCCCACATGGTCACCCACAGCAGCCGCAAGGACCAC
GAGTGCAAGCTCTGCGGGGCCTCCTTTCGGACTAAGGGCTCACTCATCCGGCACCACCGGAGGC
ACACAGATGAGCGTCCATATAAGTGTGCCAAGTGTGGGAAGAGCTTCCGGGAGTCTGGAGCGCT
AACGAGGCACCTCAAGTCTCTCACTCCATGCACAGAAAAAATTCGCTTCACCATGAGCAAGGAT
GTGGTTGTGGGCAAAGAAGATATGCCTACAGTGACAGGCGAGCCTGTGGAGACATCGCCGGTGA
TTCATCTGGTGACAGATGCCAAGGGCACTGTCATCCATGAAGTCCATGTCCAGATGCAGGAACT
GCCGTTGGGCATGAAACCCCTGGCCCCAGAGCCTCCAGACCCCGAGGAGCTTCCTTGTTCTAGT
GAGGGCAGCCGTGAAAACCTTTTGCACCAGGCTATACAGAATTCTGGCATTGTTCTTGAGCGGG
TCACTGGGGAGGAAAGTGCCCTTGAGCCGGCCCCAACCTCTGGGTCTAGTCCGCAGCCCCTGGG
AGATGGACCTTCAGAACTCCCACTATTGGAGGTGGAGCAGATGGAGACACAGGTGGCCAGTGAG
GCTTCCACTGTGCCCAGGACGCACCCATGTCCTCAATGCAGTGAGACCTTCCCAACAGCAGCCA
CCCTGGAGGCTCACAAGAGAGGCCATGCAGGGCCGAGGCCGTTCCCCTGTGCACAGTGTGGCAA
GGCCTTTCCCAAGGCCTACCTGCTCAAGAAACACCAGGAGGTGCATGTGCACGAGCGCCGCTTC
CGCTGCGGGGACTGTGGGAAGCTGTACAAGACCATCGCCCATGTGCGTGGCCACCGGCGCGTCC
ACTCCGATGAGCGGCCCTTCCCTTGTCCCCAGTGTGGCAAGCGCTACAAGACTAAGAATGCCCA
GCAGGTGCACTTCCGGACACACTTGGAGGAGAAGCCACACGTGTGCCAGTTCTGCAGCCGAGGC
TTCCGAGAGAAGGGGTCACTGGTGCGGCATGTGCGGCACCACACAGGCGAGAAGCCCTTCAAGT
GCTACAAGTGTGGCCGTGGTTTTGCTGAGCATGGCACGCTTAACCGGCACCTGCGTACCAAAGG
GGGCTGCCTACTGGAGGTGGAGGAATTGCTGGTGTCTGAGGAGAGCCCCTCAGCAGCTGCCACT
GTGCTGGCTGAGGACCCCCACACTGTGCTGGTGGAGTTCTCATCTGTGGTGGCTGACACGCAAG
AATACATCATTGAGGCCACTGCAGATGATGCGGAGACCAGTGAAGCTACAGAGGTTATCGAGGG
CACCCAGACAGAGGTGGACAGCCACATCATGAAGGTGGTACAGCAGATTGTGCACCAGGCCAGT
GCTGGGCACCAGATCATTGTGCAGAATGTGACCGTGGACCAGGAGGCAGGGCTGGGCTCGGAGG
CAGCCTCTGCAGACACCATCACCATTGCCACCCCTGAGAGCTTGACAGAACAAGTGGCCATGAC
CCTGGCCTCAGCTATCAGTGAGGGTACTGTGCTTGCAGCCCGCACAAGCTCAAATGGCACTGAA
CAGGCCACTGTGACAATGGTGTCATCAGAGGACATCGAGATCCTTGAGCATGCAGGCGAGCTGG
TCATTGCTTCACCAGAGGGCCCGCTTGAGGTGCAGACAGTCATTGTCTAGCATGGAGCCTGTAG
GGTCCCATTGGGCTGGGGCTGGGGCAGTGGCAGGGGCAGGGGCAGTGGTAAGGACCCTCAGTGC
CCATCTATGCCTGCCTGCTCTGGTAGAAAAGACAGCCCAGAGTTTCAGGCATCCAAAGGAGATG
GTATGTAAATATGTGGAAGTCTTTTGTTGCTTTACAATAAAACATGAAAACTTGCA

hide sequence

RefSeq Acc Id:

XM_013517726 ⟹ XP_013373180

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955442	15,031,210 - 15,041,436 (-)	NCBI

Sequence:

show sequence

TTATGACGACACAGTCGTAAATCCGCCATCTTTCTGTGGCGCGTTGCGACATGGAGGGCGCGAT
GGCAGTGCGGGTGACGGCCGCTCATACGGCAGAAGCCCGGGCCGAAGCCGGTCGTGAAGCGGGT
GAGGGCGGGGTCGCAGCAGCGGCTTCGGCCCCCGGCGGCTTCTTTGGCCTTCCAGCGCCCTTCG
GCGAGGAAGATGAGGATGACGTGCACAGATGTGGCCGCTGCCAGGTGGAATTTACTGCCTTGGA
AGACTTTGTTCACCACAAGATTCAAAAGGCCTGCCAGCGGGCCCCTCCGGAAGCCCTGCATGCC
CCCTCTGCTACCACCACACTCTTGGGCCAGGAGGTGGTGCCAACGGCAGCAGGCCCAGAAGAAC
CCATCACTGTGGCCCACATTGTGGTGGAGGCAGCCTCTCTGGCAACAGACATCAGCCATGCTCC
TGACCTTGTTGGCAGTGGACATATTAAAGAGGTCATCGTGGCTGCTGATGCAGAGCCAGGGGAC
ACTGAGATGGCAGAGGCCCCGGGTAGTCCCAGCCATCAGGGGATTGAGCTTGCTGTGGAGGGTG
AGCAGGCACAGGCCAAGCTGCTGGTGAACAAGGATGGCCGCTACGTGTGCATGCTGTGTCACAA
GACCTTCAAGACGGGCAGCATCCTCAAGGCCCACATGGTCACCCACAGCAGCCGCAAGGACCAC
GAGTGCAAGCTCTGCGGGGCCTCCTTTCGGACTAAGGGCTCACTCATCCGGCACCACCGGAGGC
ACACAGATGAGCGTCCATATAAGTGTGCCAAGTGTGGGAAGAGCTTCCGGGAGTCTGGAGCGCT
AACGAGGCACCTCAAGTCTCTCACTCCATGCACAGAAAAAATTCGCTTCACCATGAGCAAGGAT
GTGGTTGTGGGCAAAGAAGATATGCCTACAGGTCAGCATGGCTCAGGTGCCTCCACCGTGGGGA
CAGTTACATCTTCATCAGTGACAGGCGAGCCTGTGGAGACATCGCCGGTGATTCATCTGGTGAC
AGATGCCAAGGGCACTGTCATCCATGAAGTCCATGTCCAGATGCAGGAACTGCCGTTGGGCATG
AAACCCCTGGCCCCAGAGCCTCCAGACCCCGAGGAGCTTCCTTGTTCTAGTGAGGGCAGCCGTG
AAAACCTTTTGCACCAGGCTATACAGAATTCTGGCATTGTTCTTGAGCGGGTCACTGGGGAGGA
AAGTGCCCTTGAGCCGGCCCCAACCTCTGGGTCTAGTCCGCAGCCCCTGGGAGATGGACCTTCA
GAACTCCCACTATTGGAGGTGGAGCAGATGGAGACAGTGGCCAGTGAGGCTTCCACTGTGCCCA
GGACGCACCCATGTCCTCAATGCAGTGAGACCTTCCCAACAGCAGCCACCCTGGAGGCTCACAA
GAGAGGCCATGCAGGGCCGAGGCCGTTCCCCTGTGCACAGTGTGGCAAGGCCTTTCCCAAGGCC
TACCTGCTCAAGAAACACCAGGAGGTGCATGTGCACGAGCGCCGCTTCCGCTGCGGGGACTGTG
GGAAGCTGTACAAGACCATCGCCCATGTGCGTGGCCACCGGCGCGTCCACTCCGATGAGCGGCC
CTTCCCTTGTCCCCAGTGTGGCAAGCGCTACAAGACTAAGAATGCCCAGCAGGTGCACTTCCGG
ACACACTTGGAGGAGAAGCCACACGTGTGCCAGTTCTGCAGCCGAGGCTTCCGAGAGAAGGGGT
CACTGGTGCGGCATGTGCGGCACCACACAGGCGAGAAGCCCTTCAAGTGCTACAAGTGTGGCCG
TGGTTTTGCTGAGCATGGCACGCTTAACCGGCACCTGCGTACCAAAGGGGGCTGCCTACTGGAG
GTGGAGGAATTGCTGGTGTCTGAGGAGAGCCCCTCAGCAGCTGCCACTGTGCTGGCTGAGGACC
CCCACACTGTGCTGGTGGAGTTCTCATCTGTGGTGGCTGACACGCAAGAATACATCATTGAGGC
CACTGCAGATGATGCGGAGACCAGTGAAGCTACAGAGGTTATCGAGGGCACCCAGACAGAGGTG
GACAGCCACATCATGAAGGTGGTACAGCAGATTGTGCACCAGGCCAGTGCTGGGCACCAGATCA
TTGTGCAGAATGTGACCGTGGACCAGGAGGCAGGGCTGGGCTCGGAGGCAGCCTCTGCAGACAC
CATCACCATTGCCACCCCTGAGAGCTTGACAGAACAAGTGGCCATGACCCTGGCCTCAGCTATC
AGTGAGGGTACTGTGCTTGCAGCCCGCACAAGCTCAAATGGCACTGAACAGGCCACTGTGACAA
TGGTGTCATCAGAGGACATCGAGATCCTTGAGCATGCAGGCGAGCTGGTCATTGCTTCACCAGA
GGGCCCGCTTGAGGTGCAGACAGTCATTGTCTAGCATGGAGCCTGTAGGGTCCCATTGGGCTGG
GGCTGGGGCAGTGGCAGGGGCAGGGGCAGTGGTAAGGACCCTCAGTGCCCATCTATGCCTGCCT
GCTCTGGTAGAAAAGACAGCCCAGAGTTTCAGGCATCCAAAGGAGATGGTATGTAAATATGTGG
AAGTCTTTTGTTGCTTTACAATAAAACATGAAAACTTGCA

hide sequence

RefSeq Acc Id:

XM_013517727 ⟹ XP_013373181

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955442	15,031,210 - 15,041,436 (-)	NCBI

Sequence:

show sequence

TTATGACGACACAGTCGTAAATCCGCCATCTTTCTGTGGCGCGTTGCGACATGGAGGGCGCGAT
GGCAGTGCGGGTGACGGCCGCTCATACGGCAGAAGCCCGGGCCGAAGCCGGTCGTGAAGCGGGT
GAGGGCGGGGTCGCAGCAGCGGCTTCGGCCCCCGGCGGCTTCTTTGGCCTTCCAGCGCCCTTCG
GCGAGGAAGATGAGGATGACGTGCACAGATGTGGCCGCTGCCAGGTGGAATTTACTGCCTTGGA
AGACTTTGTTCACCACAAGATTCAAAAGGCCTGCCAGCGGGCCCCTCCGGAAGCCCTGCATGCC
CCCTCTGCTACCACCACACTCTTGGGCCAGGAGGTGGTGCCAACGGCAGCAGGCCCAGAAGAAC
CCATCACTGTGGCCCACATTGTGGTGGAGGCAGCCTCTCTGGCAACAGACATCAGCCATGCTCC
TGACCTTGTTGGCAGTGGACATATTAAAGAGGTCATCGTGGCTGCTGATGCAGAGCCAGGGGAC
ACTGAGATGGCAGAGGCCCCGGGTAGTCCCAGCCATCAGGGGATTGAGCTTGCTGTGGAGGGTG
AGCAGGCACAGGCCAAGCTGCTGGTGAACAAGGATGGCCGCTACGTGTGCATGCTGTGTCACAA
GACCTTCAAGACGGGCAGCATCCTCAAGGCCCACATGGTCACCCACAGCAGCCGCAAGGACCAC
GAGTGCAAGCTCTGCGGGGCCTCCTTTCGGACTAAGGGCTCACTCATCCGGCACCACCGGAGGC
ACACAGATGAGCGTCCATATAAGTGTGCCAAGTGTGGGAAGAGCTTCCGGGAGTCTGGAGCGCT
AACGAGGCACCTCAAGTCTCTCACTCCATGCACAGAAAAAATTCGCTTCACCATGAGCAAGGAT
GTGGTTGTGGGCAAAGAAGATATGCCTACAGGTCAGCATGTGACAGGCGAGCCTGTGGAGACAT
CGCCGGTGATTCATCTGGTGACAGATGCCAAGGGCACTGTCATCCATGAAGTCCATGTCCAGAT
GCAGGAACTGCCGTTGGGCATGAAACCCCTGGCCCCAGAGCCTCCAGACCCCGAGGAGCTTCCT
TGTTCTAGTGAGGGCAGCCGTGAAAACCTTTTGCACCAGGCTATACAGAATTCTGGCATTGTTC
TTGAGCGGGTCACTGGGGAGGAAAGTGCCCTTGAGCCGGCCCCAACCTCTGGGTCTAGTCCGCA
GCCCCTGGGAGATGGACCTTCAGAACTCCCACTATTGGAGGTGGAGCAGATGGAGACACAGGTG
GCCAGTGAGGCTTCCACTGTGCCCAGGACGCACCCATGTCCTCAATGCAGTGAGACCTTCCCAA
CAGCAGCCACCCTGGAGGCTCACAAGAGAGGCCATGCAGGGCCGAGGCCGTTCCCCTGTGCACA
GTGTGGCAAGGCCTTTCCCAAGGCCTACCTGCTCAAGAAACACCAGGAGGTGCATGTGCACGAG
CGCCGCTTCCGCTGCGGGGACTGTGGGAAGCTGTACAAGACCATCGCCCATGTGCGTGGCCACC
GGCGCGTCCACTCCGATGAGCGGCCCTTCCCTTGTCCCCAGTGTGGCAAGCGCTACAAGACTAA
GAATGCCCAGCAGGTGCACTTCCGGACACACTTGGAGGAGAAGCCACACGTGTGCCAGTTCTGC
AGCCGAGGCTTCCGAGAGAAGGGGTCACTGGTGCGGCATGTGCGGCACCACACAGGCGAGAAGC
CCTTCAAGTGCTACAAGTGTGGCCGTGGTTTTGCTGAGCATGGCACGCTTAACCGGCACCTGCG
TACCAAAGGGGGCTGCCTACTGGAGGTGGAGGAATTGCTGGTGTCTGAGGAGAGCCCCTCAGCA
GCTGCCACTGTGCTGGCTGAGGACCCCCACACTGTGCTGGTGGAGTTCTCATCTGTGGTGGCTG
ACACGCAAGAATACATCATTGAGGCCACTGCAGATGATGCGGAGACCAGTGAAGCTACAGAGGT
TATCGAGGGCACCCAGACAGAGGTGGACAGCCACATCATGAAGGTGGTACAGCAGATTGTGCAC
CAGGCCAGTGCTGGGCACCAGATCATTGTGCAGAATGTGACCGTGGACCAGGAGGCAGGGCTGG
GCTCGGAGGCAGCCTCTGCAGACACCATCACCATTGCCACCCCTGAGAGCTTGACAGAACAAGT
GGCCATGACCCTGGCCTCAGCTATCAGTGAGGGTACTGTGCTTGCAGCCCGCACAAGCTCAAAT
GGCACTGAACAGGCCACTGTGACAATGGTGTCATCAGAGGACATCGAGATCCTTGAGCATGCAG
GCGAGCTGGTCATTGCTTCACCAGAGGGCCCGCTTGAGGTGCAGACAGTCATTGTCTAGCATGG
AGCCTGTAGGGTCCCATTGGGCTGGGGCTGGGGCAGTGGCAGGGGCAGGGGCAGTGGTAAGGAC
CCTCAGTGCCCATCTATGCCTGCCTGCTCTGGTAGAAAAGACAGCCCAGAGTTTCAGGCATCCA
AAGGAGATGGTATGTAAATATGTGGAAGTCTTTTGTTGCTTTACAATAAAACATGAAAACTTGC
A

hide sequence

RefSeq Acc Id:

XM_013517728 ⟹ XP_013373182

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955442	15,031,746 - 15,041,437 (-)	NCBI

Sequence:

show sequence

GTTATGACGACACAGTCGTAAATCCGCCATCTTTCTGTGGCGCGTTGCGACATGGAGGGCGCGA
TGGCAGTGCGGGTGACGGCCGCTCATACGGCAGAAGCCCGGGCCGAAGCCGGTCGTGAAGCGGG
TGAGGGCGGGGTCGCAGCAGCGGCTTCGGCCCCCGGCGGCTTCTTTGGCCTTCCAGCGCCCTTC
GGCGAGGAAGATGAGGATGACGTGCACAGATGTGGCCGCTGCCAGGTGGAATTTACTGCCTTGG
AAGACTTTGTTCACCACAAGATTCAAAAGGCCTGCCAGCGGGCCCCTCCGGAAGCCCTGCATGC
CCCCTCTGCTACCACCACACTCTTGGGCCAGGAGGTGGTGCCAACGGCAGCAGGCCCAGAAGAA
CCCATCACTGTGGCCCACATTGTGGTGGAGGCAGCCTCTCTGGCAACAGACATCAGCCATGCTC
CTGACCTTGTTGGCAGTGGACATATTAAAGAGGTCATCGTGGCTGCTGATGCAGAGCCAGGGGA
CACTGAGATGGCAGAGGCCCCGGGTAGTCCCAGCCATCAGGGGATTGAGCTTGCTGTGGAGGGT
GAGCAGGCACAGGCCAAGCTGCTGGTGAACAAGGATGGCCGCTACGTGTGCATGCTGTGTCACA
AGACCTTCAAGACGGGCAGCATCCTCAAGGCCCACATGGTCACCCACAGCAGCCGCAAGGACCA
CGAGTGCAAGCTCTGCGGGGCCTCCTTTCGGACTAAGGGCTCACTCATCCGGCACCACCGGAGG
CACACAGATGAGCGTCCATATAAGTGTGCCAAGTGTGGGAAGAGCTTCCGGGAGTCTGGAGCGC
TAACGAGGCACCTCAAGTCTCTCACTCCATGCACAGAAAAAATTCGCTTCACCATGAGCAAGGA
TGTGGTTGTGGGCAAAGAAGATATGCCTACAGGTCAGCATGGCTCAGGTGCCTCCACCGTGGGG
ACAGTTACATCTTCATCAGTGACAGGCGAGCCTGTGGAGACATCGCCGGTGATTCATCTGGTGA
CAGATGCCAAGGGCACTGTCATCCATGAAGTCCATGTCCAGATGCAGGAACTGCCGTTGGGCAT
GAAACCCCTGGCCCCAGAGCCTCCAGACCCCGAGGAGCTTCCTTGTTCTAGTGAGGGCAGCCGT
GAAAACCTTTTGCACCAGGCTATACAGAATTCTGGCATTGTTCTTGAGCGGGTCACTGGGGAGG
AAAGTGCCCTTGAGCCGGCCCCAACCTCTGGGTCTAGTCCGCAGCCCCTGGGAGATGGACCTTC
AGAACTCCCACTATTGGAGGTGGAGCAGATGGAGACACAGGTGGCCAGTGAGGCTTCCACTGTG
CCCAGGACGCACCCATGTCCTCAATGCAGTGAGACCTTCCCAACAGCAGCCACCCTGGAGGCTC
ACAAGAGAGGCCATGCAGGGCCGAGGCCGTTCCCCTGTGCACAGTGTGGCAAGGCCTTTCCCAA
GGCCTACCTGCTCAAGAAACACCAGGAGGTGCATGTGCACGAGCGCCGCTTCCGCTGCGGGGAC
TGTGGGAAGCTGTACAAGACCATCGCCCATGTGCGTGGCCACCGGCGCGTCCACTCCGATGAGC
GGCCCTTCCCTTGTCCCCAGTGTGGCAAGCGCTACAAGACTAAGAATGCCCAGCAGGTGCACTT
CCGGACACACTTGGAGGAGAAGCCACACGTGTGCCAGTTCTGCAGCCGAGGCTTCCGAGAGAAG
GGGTCACTGGTGCGGCATGTGCGGCACCACACAGGCGAGAAGCCCTTCAAGTGCTACAAGTGTG
GCCGTGGTTTTGCTGAGCATGGCACGCTTAACCGGCACCTGCGTACCAAAGGGGGCTGCCTACT
GGAGGTGGAGGAATTGCTGGTGTCTGAGGAGAGCCCCTCAGCAGCTGCCACTGTGCTGGCTGAG
GACCCCCACACTGTGCCACTGCAGATGATGCGGAGACCAGTGAAGCTACAGAGGTTATCGAGGG
CACCCAGACAGAGGTGGACAGCCACATCATGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005391492	(Get FASTA)	NCBI Sequence Viewer
	XP_005391493	(Get FASTA)	NCBI Sequence Viewer
	XP_005391494	(Get FASTA)	NCBI Sequence Viewer
	XP_005391495	(Get FASTA)	NCBI Sequence Viewer
	XP_013373180	(Get FASTA)	NCBI Sequence Viewer
	XP_013373181	(Get FASTA)	NCBI Sequence Viewer
	XP_013373182	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000021086
	ENSCLAP00000021086.1

RefSeq Acc Id:

XP_005391493 ⟸ XM_005391436

- Peptide Label:

isoform X4

- Sequence:

show sequence

MEGAMAVRVTAAHTAEARAEAGREAGEGGVAAAASAPGGFFGLPAPFGEEDEDDVHRCGRCQVE
FTALEDFVHHKIQKACQRAPPEALHAPSATTTLLGQEVVPTAAGPEEPITVAHIVVEAASLATD
ISHAPDLVGSGHIKEVIVAADAEPGDTEMAEAPGSPSHQGIELAVEGEQAQAKLLVNKDGRYVC
MLCHKTFKTGSILKAHMVTHSSRKDHECKLCGASFRTKGSLIRHHRRHTDERPYKCAKCGKSFR
ESGALTRHLKSLTPCTEKIRFTMSKDVVVGKEDMPTGSGASTVGTVTSSSVTGEPVETSPVIHL
VTDAKGTVIHEVHVQMQELPLGMKPLAPEPPDPEELPCSSEGSRENLLHQAIQNSGIVLERVTG
EESALEPAPTSGSSPQPLGDGPSELPLLEVEQMETVASEASTVPRTHPCPQCSETFPTAATLEA
HKRGHAGPRPFPCAQCGKAFPKAYLLKKHQEVHVHERRFRCGDCGKLYKTIAHVRGHRRVHSDE
RPFPCPQCGKRYKTKNAQQVHFRTHLEEKPHVCQFCSRGFREKGSLVRHVRHHTGEKPFKCYKC
GRGFAEHGTLNRHLRTKGGCLLEVEELLVSEESPSAAATVLAEDPHTVLVEFSSVVADTQEYII
EATADDAETSEATEVIEGTQTEVDSHIMKVVQQIVHQASAGHQIIVQNVTVDQEAGLGSEAASA
DTITIATPESLTEQVAMTLASAISEGTVLAARTSSNGTEQATVTMVSSEDIEILEHAGELVIAS
PEGPLEVQTVIV

hide sequence

RefSeq Acc Id:

XP_005391495 ⟸ XM_005391438

- Peptide Label:

isoform X6

- Sequence:

show sequence

MEGAMAVRVTAAHTAEARAEAGREAGEGGVAAAASAPGGFFGLPAPFGEEDEDDVHRCGRCQVE
FTALEDFVHHKIQKACQRAPPEALHAPSATTTLLGQEVVPTAAGPEEPITVAHIVVEAASLATD
ISHAPDLVGSGHIKEVIVAADAEPGDTEMAEAPGSPSHQGIELAVEGEQAQAKLLVNKDGRYVC
MLCHKTFKTGSILKAHMVTHSSRKDHECKLCGASFRTKGSLIRHHRRHTDERPYKCAKCGKSFR
ESGALTRHLKSLTPCTEKIRFTMSKDVVVGKEDMPTVTGEPVETSPVIHLVTDAKGTVIHEVHV
QMQELPLGMKPLAPEPPDPEELPCSSEGSRENLLHQAIQNSGIVLERVTGEESALEPAPTSGSS
PQPLGDGPSELPLLEVEQMETQVASEASTVPRTHPCPQCSETFPTAATLEAHKRGHAGPRPFPC
AQCGKAFPKAYLLKKHQEVHVHERRFRCGDCGKLYKTIAHVRGHRRVHSDERPFPCPQCGKRYK
TKNAQQVHFRTHLEEKPHVCQFCSRGFREKGSLVRHVRHHTGEKPFKCYKCGRGFAEHGTLNRH
LRTKGGCLLEVEELLVSEESPSAAATVLAEDPHTVLVEFSSVVADTQEYIIEATADDAETSEAT
EVIEGTQTEVDSHIMKVVQQIVHQASAGHQIIVQNVTVDQEAGLGSEAASADTITIATPESLTE
QVAMTLASAISEGTVLAARTSSNGTEQATVTMVSSEDIEILEHAGELVIASPEGPLEVQTVIV

hide sequence

RefSeq Acc Id:	XP_005391492 ⟸ XM_005391435
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C2VV28 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEGAMAVRVTAAHTAEARAEAGREAGEGGVAAAASAPGGFFGLPAPFGEEDEDDVHRCGRCQVE FTALEDFVHHKIQKACQRAPPEALHAPSATTTLLGQEVVPTAAGPEEPITVAHIVVEAASLATD ISHAPDLVGSGHIKEVIVAADAEPGDTEMAEAPGSPSHQGIELAVEGEQAQAKLLVNKDGRYVC MLCHKTFKTGSILKAHMVTHSSRKDHECKLCGASFRTKGSLIRHHRRHTDERPYKCAKCGKSFR ESGALTRHLKSLTPCTEKIRFTMSKDVVVGKEDMPTGSGASTVGTVTSSSVTGEPVETSPVIHL VTDAKGTVIHEVHVQMQELPLGMKPLAPEPPDPEELPCSSEGSRENLLHQAIQNSGIVLERVTG EESALEPAPTSGSSPQPLGDGPSELPLLEVEQMETQVASEASTVPRTHPCPQCSETFPTAATLE AHKRGHAGPRPFPCAQCGKAFPKAYLLKKHQEVHVHERRFRCGDCGKLYKTIAHVRGHRRVHSD ERPFPCPQCGKRYKTKNAQQVHFRTHLEEKPHVCQFCSRGFREKGSLVRHVRHHTGEKPFKCYK CGRGFAEHGTLNRHLRTKGGCLLEVEELLVSEESPSAAATVLAEDPHTVLVEFSSVVADTQEYI IEATADDAETSEATEVIEGTQTEVDSHIMKVVQQIVHQASAGHQIIVQNVTVDQEAGLGSEAAS ADTITIATPESLTEQVAMTLASAISEGTVLAARTSSNGTEQATVTMVSSEDIEILEHAGELVIA SPEGPLEVQTVIV hide sequence

RefSeq Acc Id:

XP_005391494 ⟸ XM_005391437

- Peptide Label:

isoform X1

- Sequence:

show sequence

MEGAMAVRVTAAHTAEARAEAGREAGEGGVAAAASAPGGFFGLPAPFGEEDEDDVHRCGRCQVE
FTALEDFVHHKIQKACQRAPPEALHAPSATTTLLGQEVVPTAAGPEEPITVAHIVVEAASLATD
ISHAPDLVGSGHIKEVIVAADAEPGDTEMAEAPGSPSHQGIELAVEGEQAQAKLLVNKDGRYVC
MLCHKTFKTGSILKAHMVTHSSRKDHECKLCGASFRTKGSLIRHHRRHTDERPYKCAKCGKSFR
ESGALTRHLKSLTPCTEKIRFTMSKDVVVGKEDMPTGQHGSGASTVGTVTSSSVTGEPVETSPV
IHLVTDAKGTVIHEVHVQMQELPLGMKPLAPEPPDPEELPCSSEGSRENLLHQAIQNSGIVLER
VTGEESALEPAPTSGSSPQPLGDGPSELPLLEVEQMETQVASEASTVPRTHPCPQCSETFPTAA
TLEAHKRGHAGPRPFPCAQCGKAFPKAYLLKKHQEVHVHERRFRCGDCGKLYKTIAHVRGHRRV
HSDERPFPCPQCGKRYKTKNAQQVHFRTHLEEKPHVCQFCSRGFREKGSLVRHVRHHTGEKPFK
CYKCGRGFAEHGTLNRHLRTKGGCLLEVEELLVSEESPSAAATVLAEDPHTVLVEFSSVVADTQ
EYIIEATADDAETSEATEVIEGTQTEVDSHIMKVVQQIVHQASAGHQIIVQNVTVDQEAGLGSE
AASADTITIATPESLTEQVAMTLASAISEGTVLAARTSSNGTEQATVTMVSSEDIEILEHAGEL
VIASPEGPLEVQTVIV

hide sequence

RefSeq Acc Id:

XP_013373181 ⟸ XM_013517727

- Peptide Label:

isoform X5

- Sequence:

show sequence

MEGAMAVRVTAAHTAEARAEAGREAGEGGVAAAASAPGGFFGLPAPFGEEDEDDVHRCGRCQVE
FTALEDFVHHKIQKACQRAPPEALHAPSATTTLLGQEVVPTAAGPEEPITVAHIVVEAASLATD
ISHAPDLVGSGHIKEVIVAADAEPGDTEMAEAPGSPSHQGIELAVEGEQAQAKLLVNKDGRYVC
MLCHKTFKTGSILKAHMVTHSSRKDHECKLCGASFRTKGSLIRHHRRHTDERPYKCAKCGKSFR
ESGALTRHLKSLTPCTEKIRFTMSKDVVVGKEDMPTGQHVTGEPVETSPVIHLVTDAKGTVIHE
VHVQMQELPLGMKPLAPEPPDPEELPCSSEGSRENLLHQAIQNSGIVLERVTGEESALEPAPTS
GSSPQPLGDGPSELPLLEVEQMETQVASEASTVPRTHPCPQCSETFPTAATLEAHKRGHAGPRP
FPCAQCGKAFPKAYLLKKHQEVHVHERRFRCGDCGKLYKTIAHVRGHRRVHSDERPFPCPQCGK
RYKTKNAQQVHFRTHLEEKPHVCQFCSRGFREKGSLVRHVRHHTGEKPFKCYKCGRGFAEHGTL
NRHLRTKGGCLLEVEELLVSEESPSAAATVLAEDPHTVLVEFSSVVADTQEYIIEATADDAETS
EATEVIEGTQTEVDSHIMKVVQQIVHQASAGHQIIVQNVTVDQEAGLGSEAASADTITIATPES
LTEQVAMTLASAISEGTVLAARTSSNGTEQATVTMVSSEDIEILEHAGELVIASPEGPLEVQTV
IV

hide sequence

RefSeq Acc Id:

XP_013373180 ⟸ XM_013517726

- Peptide Label:

isoform X2

- Sequence:

show sequence

MEGAMAVRVTAAHTAEARAEAGREAGEGGVAAAASAPGGFFGLPAPFGEEDEDDVHRCGRCQVE
FTALEDFVHHKIQKACQRAPPEALHAPSATTTLLGQEVVPTAAGPEEPITVAHIVVEAASLATD
ISHAPDLVGSGHIKEVIVAADAEPGDTEMAEAPGSPSHQGIELAVEGEQAQAKLLVNKDGRYVC
MLCHKTFKTGSILKAHMVTHSSRKDHECKLCGASFRTKGSLIRHHRRHTDERPYKCAKCGKSFR
ESGALTRHLKSLTPCTEKIRFTMSKDVVVGKEDMPTGQHGSGASTVGTVTSSSVTGEPVETSPV
IHLVTDAKGTVIHEVHVQMQELPLGMKPLAPEPPDPEELPCSSEGSRENLLHQAIQNSGIVLER
VTGEESALEPAPTSGSSPQPLGDGPSELPLLEVEQMETVASEASTVPRTHPCPQCSETFPTAAT
LEAHKRGHAGPRPFPCAQCGKAFPKAYLLKKHQEVHVHERRFRCGDCGKLYKTIAHVRGHRRVH
SDERPFPCPQCGKRYKTKNAQQVHFRTHLEEKPHVCQFCSRGFREKGSLVRHVRHHTGEKPFKC
YKCGRGFAEHGTLNRHLRTKGGCLLEVEELLVSEESPSAAATVLAEDPHTVLVEFSSVVADTQE
YIIEATADDAETSEATEVIEGTQTEVDSHIMKVVQQIVHQASAGHQIIVQNVTVDQEAGLGSEA
ASADTITIATPESLTEQVAMTLASAISEGTVLAARTSSNGTEQATVTMVSSEDIEILEHAGELV
IASPEGPLEVQTVIV

hide sequence

RefSeq Acc Id:

XP_013373182 ⟸ XM_013517728

- Peptide Label:

isoform X7

- Sequence:

show sequence

MEGAMAVRVTAAHTAEARAEAGREAGEGGVAAAASAPGGFFGLPAPFGEEDEDDVHRCGRCQVE
FTALEDFVHHKIQKACQRAPPEALHAPSATTTLLGQEVVPTAAGPEEPITVAHIVVEAASLATD
ISHAPDLVGSGHIKEVIVAADAEPGDTEMAEAPGSPSHQGIELAVEGEQAQAKLLVNKDGRYVC
MLCHKTFKTGSILKAHMVTHSSRKDHECKLCGASFRTKGSLIRHHRRHTDERPYKCAKCGKSFR
ESGALTRHLKSLTPCTEKIRFTMSKDVVVGKEDMPTGQHGSGASTVGTVTSSSVTGEPVETSPV
IHLVTDAKGTVIHEVHVQMQELPLGMKPLAPEPPDPEELPCSSEGSRENLLHQAIQNSGIVLER
VTGEESALEPAPTSGSSPQPLGDGPSELPLLEVEQMETQVASEASTVPRTHPCPQCSETFPTAA
TLEAHKRGHAGPRPFPCAQCGKAFPKAYLLKKHQEVHVHERRFRCGDCGKLYKTIAHVRGHRRV
HSDERPFPCPQCGKRYKTKNAQQVHFRTHLEEKPHVCQFCSRGFREKGSLVRHVRHHTGEKPFK
CYKCGRGFAEHGTLNRHLRTKGGCLLEVEELLVSEESPSAAATVLAEDPHTVPLQMMRRPVKLQ
RLSRAPRQRWTATS

hide sequence

RefSeq Acc Id:

ENSCLAP00000021086 ⟸ ENSCLAT00000021287

Protein Domains

C2H2-type

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000014445	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000021287	ENTREZGENE
	ENSCLAT00000021287.1	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	Znf_C2H2_sf	UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/TrEMBL
NCBI Gene	E4f1	ENTREZGENE
PANTHER	GM08392P	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN	UniProtKB/TrEMBL
Pfam	zf-C2H2	UniProtKB/TrEMBL
	zf-C2H2_6	UniProtKB/TrEMBL
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
SMART	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57667	UniProtKB/TrEMBL
UniProt	A0A8C2VV28	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - PID (archival)