Rps2 (ribosomal protein S2) - Rat Genome Database

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Gene: Rps2 (ribosomal protein S2) Chinchilla lanigera
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Symbol: Rps2
Name: ribosomal protein S2
RGD ID: 8746977
Description: ENCODES a protein that exhibits enzyme binding (ortholog); fibroblast growth factor binding (ortholog); mRNA binding (ortholog); INVOLVED IN cellular response to interleukin-4 (ortholog); formation of translation preinitiation complex (ortholog); positive regulation of ubiquitin-protein transferase activity (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH atrial fibrillation (ortholog); epilepsy (ortholog); Hypoxia (ortholog); FOUND IN cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog); nucleolus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: 40S ribosomal protein S2
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495544215,304,306 - 15,306,599 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References


Genomics

Comparative Map Data
Rps2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495544215,304,306 - 15,306,599 (+)NCBIChiLan1.0ChiLan1.0
RPS2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl161,962,058 - 1,964,841 (-)EnsemblGRCh38hg38GRCh38
GRCh38161,962,058 - 1,964,826 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37162,012,059 - 2,014,827 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36161,952,063 - 1,954,828 (-)NCBINCBI36hg18NCBI36
Build 34161,952,062 - 1,954,630NCBI
Celera162,224,244 - 2,227,009 (-)NCBI
Cytogenetic Map16p13.3NCBI
HuRef161,936,189 - 1,938,954 (-)NCBIHuRef
CHM1_1162,012,008 - 2,014,773 (-)NCBICHM1_1
Rps2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391724,939,037 - 24,940,901 (+)NCBIGRCm39mm39
GRCm39 Ensembl1724,937,090 - 24,940,903 (+)Ensembl
GRCm381724,718,121 - 24,721,927 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1724,718,116 - 24,721,929 (+)EnsemblGRCm38mm10GRCm38
MGSCv371724,857,008 - 24,858,872 (+)NCBIGRCm37mm9NCBIm37
MGSCv361724,447,709 - 24,449,522 (+)NCBImm8
Celera1725,243,190 - 25,245,054 (+)NCBICelera
Cytogenetic Map17A3.3NCBI
Rps2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21013,747,316 - 13,749,165 (+)NCBI
Rnor_6.0 Ensembl1014,088,319 - 14,089,979 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01014,088,171 - 14,090,020 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01013,903,899 - 13,905,748 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41013,975,350 - 13,977,199 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11013,975,494 - 13,977,163 (+)NCBI
Celera1013,427,034 - 13,428,883 (+)NCBICelera
Cytogenetic Map10q12NCBI
RPS2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1162,051,083 - 2,053,825 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl162,051,128 - 2,054,086 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v016739,562 - 742,323 (+)NCBIMhudiblu_PPA_v0panPan3
RPS2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1638,966,830 - 38,968,743 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha640,206,543 - 40,208,435 (+)NCBI
ROS_Cfam_1.0639,283,871 - 39,285,763 (+)NCBI
UMICH_Zoey_3.1638,960,646 - 38,962,538 (+)NCBI
UNSW_CanFamBas_1.0638,932,954 - 38,934,846 (+)NCBI
UU_Cfam_GSD_1.0639,411,841 - 39,413,733 (+)NCBI
Rps2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344104,636,052 - 104,637,992 (-)NCBI
SpeTri2.0NW_0049366942,071,295 - 2,073,409 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RPS2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl339,996,174 - 40,003,107 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1339,996,179 - 40,003,110 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
RPS2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.151,859,411 - 1,862,322 (-)NCBI
ChlSab1.1 Ensembl51,859,454 - 1,862,305 (-)Ensembl
Rps2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624913295,554 - 297,588 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005391863   ⟹   XP_005391920
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495544215,304,389 - 15,306,599 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013517681   ⟹   XP_013373135
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495544215,304,306 - 15,306,599 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005391920 (Get FASTA)   NCBI Sequence Viewer  
  XP_013373135 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005391920   ⟸   XM_005391863
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013373135   ⟸   XM_013517681
- Peptide Label: isoform X2
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000016080 ENTREZGENE
Ensembl Protein ENSCLAP00000023449 ENTREZGENE
Ensembl Transcript ENSCLAT00000023670 ENTREZGENE
NCBI Gene Rps2 ENTREZGENE