Api5 (apoptosis inhibitor 5) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Api5 (apoptosis inhibitor 5) Chinchilla lanigera
Analyze
Symbol: Api5
Name: apoptosis inhibitor 5
RGD ID: 8745906
Description: ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of fibroblast apoptotic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); intellectual disability (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); spliceosomal complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554224,121,837 - 4,149,471 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554224,121,913 - 4,149,242 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References


Genomics

Comparative Map Data
Api5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554224,121,837 - 4,149,471 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554224,121,913 - 4,149,242 (-)NCBIChiLan1.0ChiLan1.0
API5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1143,311,963 - 43,344,529 (+)EnsemblGRCh38hg38GRCh38
GRCh381143,311,970 - 43,344,530 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371143,333,546 - 43,366,079 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361143,290,109 - 43,322,655 (+)NCBINCBI36hg18NCBI36
Build 341143,290,108 - 43,322,655NCBI
Celera1143,480,519 - 43,513,094 (+)NCBI
Cytogenetic Map11p12NCBI
HuRef1143,043,693 - 43,076,275 (+)NCBIHuRef
CHM1_11143,333,124 - 43,365,702 (+)NCBICHM1_1
Api5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39294,242,072 - 94,268,531 (-)NCBIGRCm39mm39
GRCm39 Ensembl294,242,027 - 94,268,481 (-)Ensembl
GRCm38294,411,727 - 94,438,186 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl294,411,682 - 94,438,136 (-)EnsemblGRCm38mm10GRCm38
MGSCv37294,251,884 - 94,278,304 (-)NCBIGRCm37mm9NCBIm37
MGSCv36294,212,571 - 94,238,912 (-)NCBImm8
Celera295,808,356 - 95,834,786 (-)NCBICelera
Cytogenetic Map2E1NCBI
Api5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2380,378,100 - 80,403,267 (-)NCBI
Rnor_6.0 Ensembl383,310,884 - 83,335,960 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0383,310,878 - 83,336,053 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0390,010,495 - 90,035,670 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4378,819,632 - 78,844,710 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1378,716,055 - 78,741,216 (-)NCBI
Celera379,572,457 - 79,597,535 (-)NCBICelera
Cytogenetic Map3q31NCBI
API5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11143,759,414 - 43,791,975 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1143,759,414 - 43,791,975 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01143,279,024 - 43,311,602 (+)NCBIMhudiblu_PPA_v0panPan3
API5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11826,326,387 - 26,355,580 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1826,327,920 - 26,355,585 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1826,016,307 - 26,045,407 (-)NCBI
ROS_Cfam_1.01826,950,978 - 26,980,076 (-)NCBI
UNSW_CanFamBas_1.01826,106,836 - 26,135,908 (-)NCBI
UU_Cfam_GSD_1.01826,718,679 - 26,747,755 (-)NCBI
Api5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494723,117,515 - 23,141,542 (-)NCBI
SpeTri2.0NW_0049365625,229,157 - 5,253,175 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
API5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl218,941,963 - 18,994,226 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1218,962,262 - 18,994,235 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2220,666,705 - 20,698,683 (-)NCBISscrofa10.2Sscrofa10.2susScr3
API5
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1122,029,723 - 22,064,553 (-)NCBI
ChlSab1.1 Ensembl122,034,317 - 22,064,541 (-)Ensembl
Api5
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247674,591,562 - 4,614,365 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000020194   ⟹   ENSCLAP00000020001
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554224,121,837 - 4,149,471 (-)Ensembl
RefSeq Acc Id: XM_005384088   ⟹   XP_005384145
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554224,121,913 - 4,149,241 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005384089   ⟹   XP_005384146
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554224,121,913 - 4,149,242 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005384145 (Get FASTA)   NCBI Sequence Viewer  
  XP_005384146 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005384146   ⟸   XM_005384089
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005384145   ⟸   XM_005384088
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSCLAP00000020001   ⟸   ENSCLAT00000020194


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000013707 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000020001 ENTREZGENE
Ensembl Transcript ENSCLAT00000020194 ENTREZGENE
NCBI Gene Api5 ENTREZGENE