Fbln5 (fibulin 5) - Rat Genome Database
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Gene: Fbln5 (fibulin 5) Chinchilla lanigera
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Symbol: Fbln5
Name: fibulin 5
RGD ID: 8739702
Description: ENCODES a protein that exhibits integrin binding (ortholog); protein C-terminus binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN elastic fiber assembly (ortholog); extracellular matrix organization (ortholog); intramembranous bone growth (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Age Related Macular Degeneration 3 (ortholog); arteriosclerosis (ortholog); FOUND IN collagen-containing extracellular matrix (ortholog); elastic fiber (ortholog); extracellular space (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: fibulin-5
Orthologs:
Homo sapiens (human) : FBLN5 (fibulin 5)  HGNC  Alliance
Mus musculus (house mouse) : Fbln5 (fibulin 5)  MGI  Alliance
Rattus norvegicus (Norway rat) : Fbln5 (fibulin 5)  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : FBLN5 (fibulin 5)
Canis lupus familiaris (dog) : FBLN5 (fibulin 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Fbln5 (fibulin 5)
Sus scrofa (pig) : FBLN5 (fibulin 5)
Chlorocebus sabaeus (African green monkey) : FBLN5 (fibulin 5)
Heterocephalus glaber (naked mole-rat) : Fbln5 (fibulin 5)
more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543814,071,410 - 14,145,070 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543814,073,927 - 14,144,644 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References


Genomics

Comparative Map Data
Fbln5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543814,071,410 - 14,145,070 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543814,073,927 - 14,144,644 (-)NCBIChiLan1.0ChiLan1.0
FBLN5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1491,869,412 - 91,947,987 (-)EnsemblGRCh38hg38GRCh38
GRCh381491,869,411 - 91,947,694 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371492,335,755 - 92,414,046 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361491,405,508 - 91,483,788 (-)NCBINCBI36hg18NCBI36
Build 341491,405,508 - 91,483,788NCBI
Celera1472,388,374 - 72,466,655 (-)NCBI
Cytogenetic Map14q32.12NCBI
HuRef1472,516,509 - 72,594,687 (-)NCBIHuRef
CHM1_11492,273,834 - 92,352,362 (-)NCBICHM1_1
Fbln5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912101,712,824 - 101,785,541 (-)NCBI
GRCm3812101,746,565 - 101,819,119 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12101,746,565 - 101,819,055 (-)EnsemblGRCm38mm10GRCm38
MGSCv3712102,984,775 - 103,057,265 (-)NCBIGRCm37mm9NCBIm37
MGSCv3612102,147,615 - 102,228,101 (-)NCBImm8
Celera12102,955,562 - 103,028,678 (-)NCBICelera
Cytogenetic Map12ENCBI
Fbln5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.06125,644,797 - 125,723,957 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6125,644,804 - 125,723,944 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06134,856,694 - 134,935,853 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46126,018,541 - 126,098,234 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.16126,022,288 - 126,102,052 (-)NCBI
Celera6118,399,373 - 118,476,665 (-)NCBICelera
Cytogenetic Map6q32NCBI
FBLN5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11491,848,430 - 91,927,470 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1491,848,430 - 91,927,304 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01472,504,240 - 72,583,160 (-)NCBIMhudiblu_PPA_v0panPan3
FBLN5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl81,162,923 - 1,231,719 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.181,162,203 - 1,231,809 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Fbln5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936733136,374 - 200,106 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FBLN5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl7113,423,629 - 113,522,069 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.17113,423,629 - 113,526,412 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27120,031,698 - 120,120,256 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FBLN5
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl2469,626,339 - 69,703,108 (-)Ensembl
ChlSab1.12469,626,498 - 69,703,146 (-)NCBI
Fbln5
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473410,768,920 - 10,840,740 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000018818   ⟹   ENSCLAP00000018635
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495543814,071,410 - 14,145,070 (-)Ensembl
RefSeq Acc Id: XM_005390308   ⟹   XP_005390365
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495543814,073,927 - 14,144,033 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005390309   ⟹   XP_005390366
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495543814,073,927 - 14,144,034 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005390310   ⟹   XP_005390367
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495543814,073,927 - 14,144,643 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005390311   ⟹   XP_005390368
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495543814,073,927 - 14,144,644 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005390365 (Get FASTA)   NCBI Sequence Viewer  
  XP_005390366 (Get FASTA)   NCBI Sequence Viewer  
  XP_005390367 (Get FASTA)   NCBI Sequence Viewer  
  XP_005390368 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005390368   ⟸   XM_005390311
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_005390367   ⟸   XM_005390310
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_005390366   ⟸   XM_005390309
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005390365   ⟸   XM_005390308
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSCLAP00000018635   ⟸   ENSCLAT00000018818


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000012779 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000018635 ENTREZGENE
Ensembl Transcript ENSCLAT00000018818 ENTREZGENE
NCBI Gene Fbln5 ENTREZGENE