Txnl4a (thioredoxin like 4A) - Rat Genome Database

Name: Txnl4a
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Txnl4a (thioredoxin like 4A) Chinchilla lanigera

Analyze

Symbol:

Txnl4a

Name:

thioredoxin like 4A

RGD ID:

8738765

Description:

INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Burn-McKeown syndrome (ortholog); chromosome 18q deletion syndrome (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

thioredoxin-like 4A; thioredoxin-like protein 4A

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TXNL4A (thioredoxin like 4A)	NCBI	Ortholog
Mus musculus (house mouse):	Txnl4a (thioredoxin-like 4A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Txnl4a (thioredoxin-like 4A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TXNL4A (thioredoxin like 4A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TXNL4A (thioredoxin like 4A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Txnl4a (thioredoxin like 4A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TXNL4A (thioredoxin like 4A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TXNL4A (thioredoxin like 4A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Txnl4a (thioredoxin like 4A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	63,153,052 - 63,166,199 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955402	63,153,274 - 63,166,208 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Burn-McKeown syndrome (ISO)

chromosome 18q deletion syndrome (ISO)

genetic disease (ISO)

intestinal volvulus (ISO)

Neurodevelopmental Disorders (ISO)

Oculootofacial Dysplasia (ISO)

pulmonary valve stenosis (ISO)

Volvulus Of Midgut (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mRNA splicing, via spliceosome (ISO)

Cellular Component

cytoplasm (ISO)

cytosol (ISO)

nucleoplasm (ISO)

nucleus (ISO)

U2-type precatalytic spliceosome (ISO)

U4/U6 x U5 tri-snRNP complex (ISO)

Molecular Function

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

spliceosome pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Txnl4a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	63,153,052 - 63,166,199 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955402	63,153,274 - 63,166,208 (+)	NCBI	ChiLan1.0	ChiLan1.0

TXNL4A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	79,970,813 - 80,033,936 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	79,970,813 - 80,033,949 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	18	77,730,813 - 77,793,936 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	75,833,855 - 75,849,520 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	18	75,833,855 - 75,849,520	NCBI
Celera	18	74,505,339 - 74,521,004 (-)	NCBI		Celera
Cytogenetic Map	18	q23	NCBI
HuRef	18	74,354,321 - 74,369,986 (-)	NCBI		HuRef
CHM1_1	18	77,728,173 - 77,743,835 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	18	80,247,334 - 80,310,473 (-)	NCBI		T2T-CHM13v2.0

Txnl4a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	80,250,041 - 80,269,066 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	80,249,980 - 80,255,956 (+)	Ensembl		GRCm39 Ensembl
GRCm39 Ensembl	18	80,250,010 - 80,269,070 (+)	Ensembl		GRCm39 Ensembl
GRCm38	18	80,206,826 - 80,225,851 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	80,206,795 - 80,225,855 (+)	Ensembl	GRCm38		mm10	GRCm38
GRCm38.p6 Ensembl	18	80,206,765 - 80,212,741 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	80,403,537 - 80,422,590 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	80,368,858 - 80,387,910 (+)	NCBI		MGSCv36	mm8
Celera	18	81,326,193 - 81,346,625 (+)	NCBI		Celera
Cytogenetic Map	18	E3	NCBI
cM Map	18	53.34	NCBI

Txnl4a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	75,934,085 - 75,949,873 (+)	NCBI		GRCr8
mRatBN7.2	18	73,659,107 - 73,674,893 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	73,659,107 - 73,674,893 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	75,760,800 - 75,776,460 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	76,430,148 - 76,445,808 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	74,275,535 - 74,291,375 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	76,725,221 - 76,740,673 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	76,725,247 - 76,740,688 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	72,067,372 - 72,082,799 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	18	72,321,825 - 72,336,942 (+)	NCBI		Celera
Cytogenetic Map	18	q12.3	NCBI

TXNL4A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	17	97,606,821 - 97,670,745 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	18	83,302,072 - 83,363,366 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	73,618,302 - 73,679,603 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	76,937,460 - 76,952,428 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	76,937,460 - 76,952,428 (-)	Ensembl	panpan1.1		panPan2

TXNL4A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	722,223 - 735,253 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	722,293 - 735,258 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	1,724,232 - 1,737,274 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	520,112 - 533,019 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	520,550 - 533,021 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	573,166 - 586,068 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	518,510 - 531,414 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	689,716 - 702,621 (+)	NCBI		UU_Cfam_GSD_1.0

Txnl4a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	14,899,459 - 14,912,032 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936616	220,274 - 234,870 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936616	220,255 - 232,042 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TXNL4A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	127,974,543 - 127,991,177 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	127,975,164 - 127,991,112 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	310,124,483 - 310,140,432 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TXNL4A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	270,392 - 286,243 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	18	270,938 - 285,966 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666060	26,031,195 - 26,046,998 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Txnl4a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624806	367,286 - 385,946 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624806	367,668 - 385,946 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005373122	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013511663	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01001661	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDI01113001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000020926 ⟹ ENSCLAP00000020728

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955402	63,153,052 - 63,166,199 (+)	Ensembl

RefSeq Acc Id:

XM_005373122 ⟹ XP_005373179

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955402	63,153,274 - 63,166,208 (+)	NCBI

Sequence:

show sequence

CGCGCACATGCGCACTGCTCGCGCTCCCGGAAGTTCCGCTGCGCGGCAGCCGCTGCTCCGGTGA
AGTGCAGGGCGTGAGGGCCCGGGGCAAGTCGTGACGAGGCGACTCGCGCGCGGCGCCGTGCCGC
GGAGCCTGCCGCGCCAGGATGTCGTACATGCTCCCGCACCTCCACAACGGCTGGCAGGTGGATC
AGGCCATCCTCTCGGAGGAGGATCGAGTTGTGGTCATTCGGTTCGGACACGACTGGGACCCTAC
CTGCATGAAGATGGACGAGGTTCTGTACAGCATAGCCGAAAAGGTTAAAAATTTTGCAGTTATT
TATCTCGTGGATATTACTGAAGTACCTGACTTCAACAAAATGTATGAGTTATATGATCCTTGTA
CTGTCATGTTTTTTTTCAGGAACAAACACATCATGATTGACTTGGGCACTGGCAACAATAACAA
GATTAACTGGGCCATGGAAGATAAGCAGGAGATGGTTGACATAATAGAGACCGTGTATCGTGGT
GCCCGCAAAGGACGAGGCCTGGTGGTGTCTCCCAAGGACTATTCTACAAAATACAGATACTGAG
GCACTGTCATCACAGTCTGCAGATAAATGCTGTGGAGCTGTTTTTATGTGGAAATATTTTCAAC
TGTGTAGAGCCTTTGGAAAATCACGTGGAACTCAGAGGCTTGGAGGGTCCTTGAGTAAGGGTTG
CACACCTTAACTAATTGAAGCAAATAAACACATGTTGAAGGAACAATCACAATTGTTAAGAAAA
TA

hide sequence

RefSeq Acc Id:

XM_013511663 ⟹ XP_013367117

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955402	63,157,113 - 63,166,208 (+)	NCBI

Sequence:

show sequence

GGATCACTGCTAGTTCGAGGCCAGCCTGAACATAGCAAGACCCCGTCTCAAAAAAAAAAAAATT
GTTTCCTGTATAGCTGTTGATTTGATGCAGTTTTTAAAGAGACTATTTTATGTACCTTTGAGCT
GATTTTCCATTTTGTCGTAATATGGTTTGTCACAGTACTGCTTTAGGGTTCACACTTCCCTAAA
TCCCATGGTGAATAAGAATAAATGGGTGTTTTAATTTTTGTGTGTTAAAAAGCCCATACAAATA
GAGTTTAAAATTTCATGAGTGATAACATTGATGCAAAATAGTGTATTTCAATAGAATTGTGTAT
AAGGTAAATGTATTTATGGAATTTTGAAAGAATATTAGGGAATTTTCTTTAAGCAACCCATTAA
GGATTCAGAGAGTCATTTGAACAATGAAAGCAGCATTTAGCCAGATGAGAAATCTCATAAGAAC
AAACAATGCATATTGAGAATTTTTGCCTCTGGTTATAAACAGCTTTGTAGCTAGCAGAAAGTCA
TGGGGGAGGTACTGGGTAGTGATGGGGGTATGAGCTTCAGCTAGACACTTGCCACATGCCAGTC
AACTGACCTTTACTAGCTGGTCCCTGTGGCTCATCTCCTTTGTGGATAAAAAAGATATTATTGC
TGGGCTTCTAGGATTATTGTGGGAATAGATTAATATGGAAAGGTTGGCTGGGCCAGGGGGTATA
GCTCAGCAGCACAAGTACCTGCCTGGCAAGTGCAAGGTCCTGAGTTTGATTCCCAGTACCAAAA
AAAAAAAAAAAAAAAGAAAAAAGAAAGGAAACTACCGAAATCCACCCTAGGGAGGTAGGAGATG
GACTTGAGCTATTCTAGTTTTTTTCTCCTAACTGTTAACATACCCCAAGGCATCAGCCTAAAGA
CGGTGTTGTGGTGAGGTGCCAGTGTGCAAAAGGAACTGTAATTTTTCCTCTACTTCTAATTTAC
TAGGCTGTTGCTTACATGTGTACTGTACTTGTTGACAAACTGAAAGTGGATGTATGATTTTAAG
GCTTGGTTAAATAGGCATTTAAGCCTCCCCAAAAAGTGTTTTTAGAAGACTTCCTATCACATAG
CAGTAGTGTATTCCATAATCATAAGGTATTATTACTATGTATGATTACCTCTCTCACATTACAA
AATTTGCAAGATTTTATGAGTGGAGCTAACTAAAGCAAGTACTGTCTTAATTTTTGAAAAGGTT
ATCATTCAGTTATTTAGTGACTTTAAAGTGAATTACCTAAAAATGTAAAAATCATCAATTCAAA
AATTCATAGTACTGGTCAACTGCACTGAAATTTTTCTAATAATTTTAGTTGGATTCTTCACTGG
TTGAGAAGCTCTGTACAAAAATGTGAAATGGTAGTTGGCATCATATGCCAGCTTTCAACCATGT
ATTTTGTGGGAGTTAGTTTTATGTGAAAGGCAGACTTAACGGCACACAGAAGCCAAATTGCTGA
CTTGACTGAAGAGAAGAAAGCCATACAGATGAGATGTAGTTGGGGTGAAAGTCAATATAATGTT
CAGGTAGCAAGAAAATTGAGAGTCATTTTGGAAAGCCTTTCAGCATCATATGAAGAGCTCTAAG
AATGGTCACGGAAGAGGGAGTGGCTCTACCTCTTCAGTAGGAGGAAAAAACCCTAAGTATGCAC
AGCTCTGTGCTCAGTGAAAACTCTGCTATAATTTGTAATGAAATTGAAAACAACCAGACTATTG
ACCAGAGAGCATGATAGCAAGAATGATCCATGTATTGAATAGTTGGGCCAGTCACAAAGCTTGG
AAGTTGTTCATCTCTGGGAATCCTCAGAACTTTTCTCTTTTGCAGGTGTTGGAAAATAATAAAT
TAAAAAATGGCAGAGCTTGAACTGGAAATGTTTACTCCAGTTGGATGGATGTAAACGTGGATCT
CCCCAACCCCAGAAGCTTTATTTAATATGGGGCAGCATTTGTATGTGCTTTTCTGACAGGCATG
AGTCTACATTAGGAAAACTTTTACTTTTTTACTTTAAAACACTTGCATACTGTTTATTTTATTT
GACTGTCATGTGTTTTTTAAAGTTACATAACCTGTATAAAAATATACTGTACTGGGCAGATACA
AAGCAATGGTTTTTCCATTTCATTTTTGTATTTTTAAAATGGACATTTTTATATTGGAAATAAT
AGTGGGCACATAGCTTAGTTTTAGTTTTATATAAAAAATACACTGGTGCCTTAGTGAACTGCAC
ATTCATTAATGGATTGAAGTGTTCAGAACTAGTACTACTATATCTGCATTTCAGCCCACGTGGA
AAGAAGCAGAGTCTGTGCAGCCCCACAGACCAGAGCTCTTCCAAGGAGACACTGAGGGAGCTCA
AGAGTTAAAGGTTGAAGAGGGCGAATTTGGCATTGTATTACCAGTTTCTCACATAGCTGCCAAA
CTGGATATACAACTAATAGATGGTGACTGTATCCTTACTAGAAAGAAGGACCCTGCTCCTAAAT
GATGGATTGGATTACACCCTCTCTTAAGGCAGGACTGTAGAATTACAATTTTTATACTACTATT
AAGATTATGTAATAAAGATTATGTTACATCCATACTCTCCAAAGATACATTTTCAGTGATAATG
ATATGCTTCTTGAATTTTGAAATAATACCTTTACTGATAAAATTTATTCATTCAATTACCACTT
ATCTAGCGCTTTGTGTGTGTCAGATACTGTGAGTCAGGGGAGGCCTCAGTGCAGATGACAGACG
TGGTTTCTCTTGTGCAGCTTCAGACTGATCGAAAGACATGGTGTCACTCATACAGAAAGGAAAG
GGGAAAAGTACTGCGGCACCCCATTTAGTTATGGTTTATTTTACTTCTGGGTGACCTATAGTTT
TCTTGCTTATTGACAAAAGAACAAATGTGTTACTATAATACTAGCATTTACAGTGTGAAAATTT
TTCAGGATTACTGAGTGAGGATATCTAGTGTCCTCATTTATCAAACAGATGAGGTAGTTCAATT
GCCTTTAAGTGGATGCAGCACTTGCAGTCAGATGTTTGCTGCTAAGCTCACCTCCTTTCACCTG
CAGATGCCATTTCTTGTTTCACCAAGAAGTAAAAGGAGTGGGGGCTATGGAGACTCACCCCTCC
TTCCCCACTCTGTCCTGTTTCAGCTTCTCCCGTCTCAGCTCCCAAGTTTATCAGCACCGTTTCC
CACTTTTTCATTATGAGCATTTTGGGAGCGTTGTGCACACTTCACACTTCTGTTCTTCAGAACT
TCACTCTGGCCACACAACCTCTGCACATCTCACATGGTCACCACTGACCTTCCAGGAGCCAGGA
CACTTTTGAGTCCTGTCTGATTTGAACTGTGGCCTCAACATAGAGCCACATGGGAATCTCCTGT
CTGGATGCCTTTGTTTCTGGTACTGGGGCTTGAACCCAGGGCCTCATACCCACTAAGCGTTTGC
TATAACACTGAGCTACACTTTCAGCGTTCCTTTCCTGCTCTTGGCTTAATGGTGGGCTTCTGTG
CTAACTCCAAAACCCATCTTACTTTAACTTAATTCATCAGTAGTGACTCTTTTTCTAAGTAAGT
CACATTCTCAATTTTGGGAACTGGGATTTCCTATTTTTTTTAAGGGGAGCACAGTTCAACCCAT
AATGCATGAAGTTGATATAAGCTTTTTAGAGGGCATGGACACAGTATTTATAAAGATCCTTTAG
CATGTCCACTGTCTGTTGCTGAGATTCTATTTTGTGATTAGAAATTCTATTTTATGATTAGAAG
TAATGAAATATGTCCACAAATTGAGGGTAAAAGTGTATACAGATAAGTGATATTCATGAAAAAT
CAGCAAATAACAGAATGATGATGAAATAATGGCATATAAAAACCGGATAAAAATAACATTGTTA
ATAATTATGTGATCATATTGTGTTAATATAAATAAATTTTCAAAATATACACAGAAAAAAAGAT
TGGACAGAATAAGCAAAAATGTTAGTAGTAGTGACCTCTGAGTATGGGATTGGAAGTTATTTTA
CAGTGGTACCTCATTGAGCCTAACCATTGAATTTGATTCGATTTTCATCTAACTCAGATTGCCA
CCAGAATCGTGGAAAGAATCAAGTTCATGAACCAAGGTTAAAAATTTTGCAGTTATTTATCTCG
TGGATATTACTGAAGTACCTGACTTCAACAAAATGTATGAGTTATATGATCCTTGTACTGTCAT
GTTTTTTTTCAGGAACAAACACATCATGATTGACTTGGGCACTGGCAACAATAACAAGATTAAC
TGGGCCATGGAAGATAAGCAGGAGATGGTTGACATAATAGAGACCGTGTATCGTGGTGCCCGCA
AAGGACGAGGCCTGGTGGTGTCTCCCAAGGACTATTCTACAAAATACAGATACTGAGGCACTGT
CATCACAGTCTGCAGATAAATGCTGTGGAGCTGTTTTTATGTGGAAATATTTTCAACTGTGTAG
AGCCTTTGGAAAATCACGTGGAACTCAGAGGCTTGGAGGGTCCTTGAGTAAGGGTTGCACACCT
TAACTAATTGAAGCAAATAAACACATGTTGAAGGAACAATCACAATTGTTAAGAAAATA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005373179	(Get FASTA)	NCBI Sequence Viewer
	XP_013367117	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000015285.1
	ENSCLAP00000020728
	ENSCLAP00000020728.1

RefSeq Acc Id:	XP_005373179 ⟸ XM_005373122
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2VUK1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDIT EVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRGARKGRG LVVSPKDYSTKYRY hide sequence

RefSeq Acc Id:	XP_013367117 ⟸ XM_013511663
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2VM07 (UniProtKB/TrEMBL)
- Sequence:	show sequence MYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRGARKGRGLVVSPKD YSTKYRY hide sequence

RefSeq Acc Id:

ENSCLAP00000020728 ⟸ ENSCLAT00000020926

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000010526	UniProtKB/TrEMBL
	ENSCLAG00000014203	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000015445.1	UniProtKB/TrEMBL
	ENSCLAT00000020926	ENTREZGENE
	ENSCLAT00000020926.1	UniProtKB/TrEMBL
Gene3D-CATH	Glutaredoxin	UniProtKB/TrEMBL
InterPro	Dim1	UniProtKB/TrEMBL
	Thioredoxin-like_sf	UniProtKB/TrEMBL
NCBI Gene	LOC102027802	ENTREZGENE
PANTHER	PTHR12052	UniProtKB/TrEMBL
	THIOREDOXIN-LIKE PROTEIN 4A	UniProtKB/TrEMBL
Pfam	DIM1	UniProtKB/TrEMBL
PIRSF	mRNA_splic_U5	UniProtKB/TrEMBL
SMART	DIM1	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52833	UniProtKB/TrEMBL
UniProt	A0A8C2VM07	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2VUK1	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-16	Txnl4a	thioredoxin like 4A		thioredoxin-like 4A	Symbol and/or name change	5135510	APPROVED
2015-08-25	Txnl4a	thioredoxin-like 4A	LOC102027802	thioredoxin-like protein 4A-like	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

RGD Manual Annotations

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

RGD Manual Annotations