Atp6v1g1 (ATPase H+ transporting V1 subunit G1) - Rat Genome Database

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Gene: Atp6v1g1 (ATPase H+ transporting V1 subunit G1) Chinchilla lanigera
Analyze
Symbol: Atp6v1g1
Name: ATPase H+ transporting V1 subunit G1
RGD ID: 8738091
Description: ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATPase binding (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN ATPase complex (ortholog); cytosol (ortholog); extrinsic component of synaptic vesicle membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1; V-type proton ATPase subunit G 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541913,047,755 - 13,056,221 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541913,047,755 - 13,056,113 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Atp6v1g1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541913,047,755 - 13,056,221 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541913,047,755 - 13,056,113 (-)NCBIChiLan1.0ChiLan1.0
ATP6V1G1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389114,587,769 - 114,598,879 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9114,587,706 - 114,598,915 (+)EnsemblGRCh38hg38GRCh38
GRCh379117,350,049 - 117,361,159 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369116,389,815 - 116,400,973 (+)NCBINCBI36Build 36hg18NCBI36
Build 349114,429,579 - 114,440,206NCBI
Celera987,997,647 - 88,008,806 (+)NCBICelera
Cytogenetic Map9q32NCBI
HuRef986,955,148 - 86,966,307 (+)NCBIHuRef
CHM1_19117,496,680 - 117,507,848 (+)NCBICHM1_1
T2T-CHM13v2.09126,780,187 - 126,791,297 (+)NCBIT2T-CHM13v2.0
Atp6v1g1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39463,463,002 - 63,468,938 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl463,463,009 - 63,468,987 (+)EnsemblGRCm39 Ensembl
GRCm38463,544,765 - 63,550,701 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl463,544,772 - 63,550,750 (+)EnsemblGRCm38mm10GRCm38
MGSCv37463,205,799 - 63,211,735 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36463,031,198 - 63,037,062 (+)NCBIMGSCv36mm8
Celera462,204,906 - 62,210,851 (+)NCBICelera
Cytogenetic Map4B3NCBI
cM Map434.01NCBI
Atp6v1g1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8581,976,959 - 81,983,139 (+)NCBIGRCr8
mRatBN7.2576,961,462 - 76,967,642 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl576,961,499 - 76,969,463 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx579,360,978 - 79,367,187 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0581,178,134 - 81,184,345 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0581,153,632 - 81,159,843 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0579,367,663 - 79,373,843 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl579,367,663 - 79,373,843 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0583,481,867 - 83,488,047 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4580,515,635 - 80,521,815 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1580,520,811 - 80,526,974 (+)NCBI
Celera575,895,498 - 75,901,678 (+)NCBICelera
Cytogenetic Map5q24NCBI
ATP6V1G1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21124,779,040 - 24,790,744 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1924,781,400 - 24,792,708 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0985,685,910 - 85,696,255 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19114,048,387 - 114,058,878 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9114,048,387 - 114,058,878 (+)Ensemblpanpan1.1panPan2
ATP6V1G1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11168,755,586 - 68,760,863 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1167,153,026 - 67,162,490 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01169,874,857 - 69,884,359 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1169,741,009 - 69,882,907 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11168,389,934 - 68,399,413 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01168,430,341 - 68,439,666 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01169,161,079 - 69,170,540 (+)NCBIUU_Cfam_GSD_1.0
Atp6v1g1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947184,033,200 - 184,041,470 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364873,801,665 - 3,811,293 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364873,801,745 - 3,809,997 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC102165256
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1719,272,032 - 19,272,926 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2720,421,533 - 20,423,014 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ATP6V1G1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11224,994,480 - 25,004,618 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1224,994,051 - 25,004,668 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603517,826,004 - 17,836,791 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Atp6v1g1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476020,624,624 - 20,636,631 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476020,627,985 - 20,636,670 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000015208   ⟹   ENSCLAP00000015048
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541913,047,755 - 13,056,221 (-)Ensembl
RefSeq Acc Id: XM_005382627   ⟹   XP_005382684
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541913,047,755 - 13,056,113 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005382684 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000015048
  ENSCLAP00000015048.1
Reference Protein Sequences
RefSeq Acc Id: XP_005382684   ⟸   XM_005382627
- UniProtKB: A0A8C2VFY1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000015048   ⟸   ENSCLAT00000015208


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000010372 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000015208 ENTREZGENE
  ENSCLAT00000015208.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.2950 UniProtKB/TrEMBL
InterPro V-ATPase_G UniProtKB/TrEMBL
NCBI Gene Atp6v1g1 ENTREZGENE
PANTHER PTHR12713 UniProtKB/TrEMBL
  V-TYPE PROTON ATPASE SUBUNIT G 1 UniProtKB/TrEMBL
Pfam V-ATPase_G UniProtKB/TrEMBL
UniProt A0A8C2VFY1 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Atp6v1g1  ATPase H+ transporting V1 subunit G1    ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1  Symbol and/or name change 5135510 APPROVED