Luc7l (LUC7 like) - Rat Genome Database

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Gene: Luc7l (LUC7 like) Chinchilla lanigera
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Symbol: Luc7l
Name: LUC7 like
RGD ID: 8737158
Description: ENCODES a protein that exhibits identical protein binding (ortholog); RS domain binding (ortholog); INVOLVED IN negative regulation of striated muscle tissue development (ortholog); FOUND IN nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: LUC7-like; putative RNA-binding protein Luc7-like 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544216,965,788 - 16,997,329 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544216,965,788 - 16,997,329 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (ISO)

Molecular Function

References


Genomics

Comparative Map Data
Luc7l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544216,965,788 - 16,997,329 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544216,965,788 - 16,997,329 (+)NCBIChiLan1.0ChiLan1.0
LUC7L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl16188,969 - 229,463 (-)EnsemblGRCh38hg38GRCh38
GRCh3816188,969 - 229,449 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh3716238,989 - 279,448 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3616178,971 - 219,450 (-)NCBINCBI36hg18NCBI36
Build 3416178,974 - 219,450NCBI
Celera16437,860 - 478,332 (-)NCBI
Cytogenetic Map16p13.3NCBI
HuRef16156,536 - 196,987 (-)NCBIHuRef
CHM1_116238,912 - 279,378 (-)NCBICHM1_1
Luc7l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391726,471,874 - 26,504,484 (+)NCBIGRCm39mm39
GRCm39 Ensembl1726,471,870 - 26,504,478 (+)Ensembl
GRCm381726,252,899 - 26,285,510 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1726,252,896 - 26,285,504 (+)EnsemblGRCm38mm10GRCm38
MGSCv371726,389,855 - 26,422,449 (+)NCBIGRCm37mm9NCBIm37
MGSCv361725,980,551 - 26,009,568 (+)NCBImm8
Celera1726,787,083 - 26,820,005 (+)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1713.09NCBI
Luc7l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21015,273,340 - 15,307,131 (+)NCBImRatBN7.2
Rnor_6.0 Ensembl1015,538,872 - 15,568,638 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01015,538,878 - 15,572,651 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01015,434,018 - 15,467,745 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41015,522,334 - 15,549,100 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11015,523,381 - 15,550,147 (+)NCBI
Celera1014,942,376 - 14,969,587 (+)NCBICelera
Cytogenetic Map10q12NCBI
LUC7L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.116177,857 - 217,524 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl16177,857 - 217,519 (-)Ensemblpanpan1.1panPan2
LUC7L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1640,274,290 - 40,310,084 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl640,273,801 - 40,309,921 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha641,537,095 - 41,572,894 (+)NCBI
ROS_Cfam_1.0640,616,502 - 40,652,360 (+)NCBI
UMICH_Zoey_3.1640,304,768 - 40,340,566 (+)NCBI
UNSW_CanFamBas_1.0640,265,757 - 40,301,559 (+)NCBI
UU_Cfam_GSD_1.0640,744,252 - 40,780,083 (+)NCBI
Luc7l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344112,589,490 - 112,624,860 (+)NCBI
SpeTri2.0NW_004936501687,352 - 722,720 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LUC7L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl341,437,262 - 41,473,112 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1341,442,127 - 41,473,115 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2340,960,784 - 40,991,229 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LUC7L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.15132,018 - 176,060 (-)NCBI
ChlSab1.1 Ensembl5128,232 - 176,020 (-)Ensembl
Vero_WHO_p1.0NW_02366606831,010,060 - 31,053,221 (+)NCBI
Luc7l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046249131,047,942 - 1,075,588 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000023807   ⟹   ENSCLAP00000023583
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495544216,965,788 - 16,997,112 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000023808   ⟹   ENSCLAP00000023584
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495544216,965,833 - 16,997,329 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000023809   ⟹   ENSCLAP00000023585
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495544216,983,927 - 16,997,112 (+)Ensembl
RefSeq Acc Id: XM_005391669   ⟹   XP_005391726
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495544216,965,833 - 16,997,329 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013517876   ⟹   XP_013373330
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495544216,965,788 - 16,997,329 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005391726 (Get FASTA)   NCBI Sequence Viewer  
  XP_013373330 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005391726   ⟸   XM_005391669
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013373330   ⟸   XM_013517876
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSCLAP00000023585   ⟸   ENSCLAT00000023809
RefSeq Acc Id: ENSCLAP00000023583   ⟸   ENSCLAT00000023807
RefSeq Acc Id: ENSCLAP00000023584   ⟸   ENSCLAT00000023808


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000016174 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000023584 ENTREZGENE
Ensembl Transcript ENSCLAT00000023808 ENTREZGENE
NCBI Gene Luc7l ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Luc7l  LUC7 like    LUC7-like  Symbol and/or name change 5135510 APPROVED
2015-08-25 Luc7l  LUC7-like    LUC7-like (S. cerevisiae)  Symbol and/or name change 5135510 APPROVED