Dctpp1 (dCTP pyrophosphatase 1) - Rat Genome Database

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Gene: Dctpp1 (dCTP pyrophosphatase 1) Chinchilla lanigera
Analyze
Symbol: Dctpp1
Name: dCTP pyrophosphatase 1
RGD ID: 8735828
Description: ENCODES a protein that exhibits dCTP diphosphatase activity (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN dCTP catabolic process (ortholog); DNA protection (ortholog); dTTP catabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554937,357,204 - 7,360,034 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554937,357,204 - 7,360,034 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytosol  (ISO)
mitochondrion  (ISO)
nucleoplasm  (ISO)
nucleus  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
Dctpp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554937,357,204 - 7,360,034 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554937,357,204 - 7,360,034 (-)NCBIChiLan1.0ChiLan1.0
DCTPP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381630,423,615 - 30,430,030 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1630,423,615 - 30,430,030 (-)EnsemblGRCh38hg38GRCh38
GRCh371630,434,936 - 30,441,351 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361630,342,520 - 30,348,874 (-)NCBINCBI36Build 36hg18NCBI36
Celera1629,857,548 - 29,863,885 (+)NCBICelera
Cytogenetic Map16p11.2NCBI
HuRef1627,997,232 - 28,003,588 (-)NCBIHuRef
CHM1_11631,751,466 - 31,757,820 (-)NCBICHM1_1
T2T-CHM13v2.01630,809,819 - 30,816,234 (-)NCBIT2T-CHM13v2.0
Dctpp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397126,856,131 - 126,859,839 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7126,856,131 - 126,859,881 (-)EnsemblGRCm39 Ensembl
GRCm387127,256,959 - 127,260,667 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7127,256,959 - 127,260,709 (-)EnsemblGRCm38mm10GRCm38
MGSCv377134,400,473 - 134,404,181 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367127,048,107 - 127,051,815 (-)NCBIMGSCv36mm8
Celera7127,105,674 - 127,109,383 (-)NCBICelera
Cytogenetic Map7F3NCBI
cM Map769.42NCBI
Dctpp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81191,307,933 - 191,311,326 (-)NCBIGRCr8
mRatBN7.21181,877,440 - 181,880,833 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1181,877,437 - 181,880,839 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1190,228,131 - 190,231,512 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01197,414,218 - 197,417,599 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01190,082,593 - 190,085,974 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01198,703,459 - 198,706,852 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1198,703,461 - 198,706,852 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01205,696,305 - 205,699,698 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41186,519,955 - 186,523,348 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11186,669,837 - 186,673,229 (-)NCBI
Celera1179,528,917 - 179,532,300 (-)NCBICelera
Cytogenetic Map1q37NCBI
DCTPP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21833,629,486 - 33,636,121 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11638,430,932 - 38,438,331 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01624,538,023 - 24,545,426 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11630,794,268 - 30,802,207 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1630,794,268 - 30,802,179 (-)Ensemblpanpan1.1panPan2
DCTPP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1617,679,681 - 17,683,644 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl617,679,722 - 17,683,570 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha619,253,648 - 19,257,592 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0617,810,663 - 17,814,594 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl617,810,709 - 17,814,520 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1617,610,846 - 17,614,777 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0617,526,330 - 17,530,261 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0617,841,310 - 17,845,272 (+)NCBIUU_Cfam_GSD_1.0
Dctpp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344124,782,876 - 124,786,371 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650112,879,241 - 12,884,287 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650112,880,745 - 12,884,240 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DCTPP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl317,886,890 - 17,900,557 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1317,896,426 - 17,900,562 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2318,312,086 - 18,316,024 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DCTPP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1527,096,489 - 27,102,778 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl527,096,212 - 27,102,835 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660682,416,903 - 2,423,222 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000024309   ⟹   ENSCLAP00000024077
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554937,357,204 - 7,360,034 (-)Ensembl
RefSeq Acc Id: XM_005405348   ⟹   XP_005405405
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554937,357,204 - 7,360,034 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005405405 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000024077
  ENSCLAP00000024077.1
Reference Protein Sequences
RefSeq Acc Id: XP_005405405   ⟸   XM_005405348
- UniProtKB: A0A8C2W275 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000024077   ⟸   ENSCLAT00000024309


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000016532 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000024309 ENTREZGENE
  ENSCLAT00000024309.1 UniProtKB/TrEMBL
Gene3D-CATH MazG-like UniProtKB/TrEMBL
InterPro DCTPP UniProtKB/TrEMBL
NCBI Gene Dctpp1 ENTREZGENE
PANTHER DCTP PYROPHOSPHATASE 1 UniProtKB/TrEMBL
  DCTP PYROPHOSPHATASE 1 UniProtKB/TrEMBL
Pfam MazG-like UniProtKB/TrEMBL
Superfamily-SCOP all-alpha NTP pyrophosphatases UniProtKB/TrEMBL
UniProt A0A8C2W275 ENTREZGENE, UniProtKB/TrEMBL