Pik3ip1 (phosphoinositide-3-kinase interacting protein 1) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Pik3ip1 (phosphoinositide-3-kinase interacting protein 1) Chinchilla lanigera
Analyze
Symbol: Pik3ip1
Name: phosphoinositide-3-kinase interacting protein 1
RGD ID: 8734881
Description: ENCODES a protein that exhibits phosphatidylinositol 3-kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); genetic disease (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: phosphoinositide-3-kinase-interacting protein 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554555,476,095 - 5,488,265 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554555,474,569 - 5,488,420 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species

Genomics

Comparative Map Data
Pik3ip1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554555,476,095 - 5,488,265 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554555,474,569 - 5,488,420 (-)NCBIChiLan1.0ChiLan1.0
PIK3IP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382231,281,593 - 31,292,534 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2231,281,594 - 31,292,534 (-)EnsemblGRCh38hg38GRCh38
GRCh372231,677,579 - 31,688,520 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362230,007,579 - 30,018,474 (-)NCBINCBI36Build 36hg18NCBI36
Celera2215,478,064 - 15,489,008 (-)NCBICelera
Cytogenetic Map22q12.2NCBI
HuRef2214,639,191 - 14,650,132 (-)NCBIHuRef
CHM1_12231,637,394 - 31,648,335 (-)NCBICHM1_1
T2T-CHM13v2.02231,745,576 - 31,756,513 (-)NCBIT2T-CHM13v2.0
Pik3ip1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39113,280,731 - 3,292,971 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl113,280,401 - 3,292,971 (+)EnsemblGRCm39 Ensembl
GRCm38113,319,241 - 3,342,971 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl113,330,401 - 3,342,971 (+)EnsemblGRCm38mm10GRCm38
MGSCv37113,230,734 - 3,242,974 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36113,230,810 - 3,242,974 (+)NCBIMGSCv36mm8
Celera113,821,671 - 3,833,939 (+)NCBICelera
Cytogenetic Map11A1NCBI
cM Map112.33NCBI
Pik3ip1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81482,428,315 - 82,440,261 (+)NCBIGRCr8
mRatBN7.21478,204,668 - 78,216,616 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1478,204,053 - 78,216,608 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1482,645,643 - 82,657,589 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01483,885,757 - 83,897,703 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01480,331,495 - 80,343,441 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01483,559,397 - 83,572,481 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1483,560,541 - 83,572,473 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01484,247,648 - 84,260,753 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41483,955,895 - 83,967,828 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11483,975,039 - 83,986,972 (+)NCBI
Celera1477,118,136 - 77,130,069 (+)NCBICelera
Cytogenetic Map14q21NCBI
PIK3IP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22341,237,436 - 41,248,185 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12243,935,910 - 43,946,741 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02212,305,518 - 12,316,434 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12230,141,326 - 30,152,397 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2230,141,326 - 30,152,397 (-)Ensemblpanpan1.1panPan2
PIK3IP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12624,243,195 - 24,255,335 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2624,244,772 - 24,255,131 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2624,113,213 - 24,125,201 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02624,626,590 - 24,638,613 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2624,623,419 - 24,638,555 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12624,329,790 - 24,341,795 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02624,591,664 - 24,603,676 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02624,653,292 - 24,665,310 (-)NCBIUU_Cfam_GSD_1.0
Pik3ip1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118117,188,262 - 117,198,541 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936755445,894 - 457,386 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936755444,264 - 456,071 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PIK3IP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1448,040,881 - 48,051,660 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11448,040,848 - 48,051,660 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21451,151,820 - 51,162,619 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PIK3IP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11914,169,738 - 14,183,329 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1914,171,243 - 14,183,350 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666045111,934,068 - 111,947,507 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pik3ip1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247477,767,802 - 7,779,725 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247477,767,823 - 7,779,675 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000015088   ⟹   ENSCLAP00000014929
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554555,476,095 - 5,488,265 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000015089   ⟹   ENSCLAP00000014930
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554555,485,220 - 5,488,265 (-)Ensembl
RefSeq Acc Id: XM_013520330   ⟹   XP_013375784
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554555,474,569 - 5,488,420 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013375784 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000014929.1
  ENSCLAP00000014930.1
Reference Protein Sequences
RefSeq Acc Id: XP_013375784   ⟸   XM_013520330
- Sequence:
RefSeq Acc Id: ENSCLAP00000014930   ⟸   ENSCLAT00000015089
RefSeq Acc Id: ENSCLAP00000014929   ⟸   ENSCLAT00000015088


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000010296 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000015088.1 UniProtKB/TrEMBL
  ENSCLAT00000015089.1 UniProtKB/TrEMBL
NCBI Gene Pik3ip1 ENTREZGENE
UniProt A0A8C2YQ24_CHILA UniProtKB/TrEMBL
  A0A8C2YQ25_CHILA UniProtKB/TrEMBL