Limk1 (LIM domain kinase 1) - Rat Genome Database

Name: Limk1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Limk1 (LIM domain kinase 1) Chinchilla lanigera

Analyze

Symbol:

Limk1

Name:

LIM domain kinase 1

RGD ID:

8732373

Description:

ENCODES a protein that exhibits heat shock protein binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN axon extension (ortholog); positive regulation of actin filament bundle assembly (ortholog); positive regulation of axon extension (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); genetic disease (ortholog); FOUND IN axonal growth cone (ortholog); cytoplasm (ortholog); cytosol (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	LIMK1 (LIM domain kinase 1)	NCBI	Ortholog
Mus musculus (house mouse):	Limk1 (LIM domain kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Limk1 (LIM domain kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	LIMK1 (LIM domain kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	LIMK1 (LIM domain kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	LOC101971716 (eukaryotic translation initiation factor 4H)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	LIMK1 (LIM domain kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	LIMK1 (LIM domain kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Limk1 (LIM domain kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

NCBI Annotation Information:

Annotation category: partial on reference assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955456	13,750,889 - 13,774,021 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955456	13,751,135 - 13,773,722 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autism spectrum disorder (ISO)

autistic disorder (ISO)

genetic disease (ISO)

High Myopia (ISO)

intestinal volvulus (ISO)

Neurodevelopmental Disorders (ISO)

pleomorphic xanthoastrocytoma (ISO)

schizophrenia (ISO)

supravalvular aortic stenosis (ISO)

Volvulus Of Midgut (ISO)

Williams-Beuren syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

axon extension (ISO)

positive regulation of actin filament bundle assembly (ISO)

positive regulation of axon extension (ISO)

positive regulation of stress fiber assembly (ISO)

stress fiber assembly (ISO)

Cellular Component

axonal growth cone (ISO)

cytoplasm (ISO)

cytosol (ISO)

focal adhesion (ISO)

glutamatergic synapse (ISO)

lamellipodium (ISO)

male germ cell nucleus (ISO)

membrane (ISO)

neuron projection (ISO)

nuclear speck (ISO)

nucleus (ISO)

perinuclear region of cytoplasm (ISO)

postsynapse (ISO)

Molecular Function

heat shock protein binding (ISO)

protein binding (ISO)

protein serine/threonine kinase activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

insulin responsive facilitative sugar transporter mediated glucose transport pathway (ISO)

Rab family mediated signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Limk1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955456	13,750,889 - 13,774,021 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955456	13,751,135 - 13,773,722 (-)	NCBI	ChiLan1.0	ChiLan1.0

LIMK1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	74,083,804 - 74,122,525 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	74,082,933 - 74,122,525 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	73,498,134 - 73,536,855 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	73,136,092 - 73,174,790 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	72,942,806 - 72,981,505	NCBI
Celera	7	68,977,591 - 69,016,280 (+)	NCBI		Celera
Cytogenetic Map	7	q11.23	NCBI
HuRef	7	69,382,814 - 69,418,976 (+)	NCBI		HuRef
CHM1_1	7	73,643,562 - 73,682,183 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	75,286,937 - 75,325,667 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	72,831,179 - 72,869,927 (+)	NCBI

Limk1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	134,684,893 - 134,718,713 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	134,684,893 - 134,717,452 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	134,656,039 - 134,689,859 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	134,656,039 - 134,688,598 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	135,131,909 - 135,164,460 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	134,940,679 - 134,991,269 (-)	NCBI		MGSCv36	mm8
Celera	5	131,664,058 - 131,696,609 (-)	NCBI		Celera
Cytogenetic Map	5	G2	NCBI
cM Map	5	74.73	NCBI

Limk1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	27,663,177 - 27,697,085 (+)	NCBI		GRCr8
mRatBN7.2	12	22,026,697 - 22,060,605 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	22,026,672 - 22,060,606 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	23,167,689 - 23,203,752 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	23,780,037 - 23,814,843 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	22,847,911 - 22,881,485 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	25,036,630 - 25,070,538 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	25,036,605 - 25,070,539 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	27,037,250 - 27,070,939 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	23,091,809 - 23,125,717 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	22,951,901 - 22,985,835 (+)	NCBI
Celera	12	23,790,979 - 23,824,570 (+)	NCBI		Celera
Cytogenetic Map	12	q12	NCBI

LIMK1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	90,777,071 - 90,815,787 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	139,041,703 - 139,080,418 (-)	NCBI		NHGRI_mPanPan1
PanPan1.1	7	81,233,453 - 81,271,282 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	81,231,876 - 81,271,282 (+)	Ensembl	panpan1.1		panPan2

LIMK1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	6,263,374 - 6,285,734 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	6,264,548 - 6,286,026 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	7,959,877 - 7,983,548 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	6,076,858 - 6,100,527 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	6,078,155 - 6,100,709 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	6,067,274 - 6,090,947 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	6,015,097 - 6,038,762 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	6,178,780 - 6,202,457 (-)	NCBI		UU_Cfam_GSD_1.0

LOC101971716
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	130,788,070 - 130,851,137 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936543	3,224,392 - 3,248,526 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0 Ensembl	NW_004936543	3,185,201 - 3,208,388 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936543	3,190,741 - 3,208,232 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LIMK1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	11,252,648 - 11,279,284 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	11,252,820 - 11,279,286 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	10,936,786 - 10,961,582 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LIMK1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	28	8,953,095 - 8,988,848 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	28	8,952,957 - 8,988,672 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666070	7,555,472 - 7,591,095 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Limk1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624740	13,823,437 - 13,847,808 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624740	13,824,930 - 13,847,605 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013520581	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01046617	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01046618	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCB01130874	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCE01065465	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000013898 ⟹ ENSCLAP00000013743

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955456	13,750,889 - 13,774,021 (-)	Ensembl

RefSeq Acc Id:

ENSCLAT00000013899 ⟹ ENSCLAP00000013744

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955456	13,750,889 - 13,769,252 (-)	Ensembl

RefSeq Acc Id:

XM_013520581 ⟹ XP_013376035

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955456	13,751,135 - 13,773,722 (-)	NCBI

Sequence:

show sequence

GCCGCAGCTCGCGGGCCCCGCCTCGGCCCGCCCCTCCGCGCGCTCCCCCGGCCGCCGCGGCACC
TAGCCGGTGTCCCAGCCGGTGTCTCCGAGGCGGCGGTGCCCGGCCCGCGCTCCCTGCCTCCGCC
TATCCAGGCCGGCGGTGGGCGAGCTCGCGGGCCCGGCCGCCCCCAGCCCCGGCCGCCGGCCCCG
CCTCCCGCCGAGTGCATGAGGTTGACGCTACTTTGTTGCACCTGGAGGGAAGAACGCATGGGAG
AGGAAGGAAGTGAATTGCCCGTGTGTGCACGCTGCGGCCAGAGGATCTATGACGGCCAGTACCT
CCAGGCCCTGAACGCTGATTGGCACGCAGACTGCTTCAGGTGCTGTGAATGCGGTGCCTCCCTG
TCACACCAGTACTACGAGAAGGATGGGCAGCTCTTCTGCAAGAAGGACTACTGGGCCCGCTACG
GCGAGTCGTGCCATGGCTGCTCGGAGCACATCACCAAGGGGTTGGTCATGGTGGCCGGGGAGCT
GAAGTATCACCCCGAGTGCTTCATCTGCCTCACGTGTGGGACCTTCATCGGAGATGGGGACACC
TACACCCTGGTGGAGCATTCCAAGCTATACTGTGGGCATTGCTACTACCAGACCGTGGTGACCC
CCGTCATCGAGCAGATCCTGCCTGACTCCCCCGGCTCCCACCTGCCCCACACGGTCACCCTGGT
GTCCATCCCAGCCTCCACTCATGGCAAACGTGGCCTGTCTGTCTCCATCGACCCACCGCACGGC
CTGCCGGGCTGCGGCACGGAGCATTCGCACACCGTCCGAGTCCAGGGAGTGGACCCGGGCTGCA
TGAGCCCAGACGTGAAGAATTCCATCCATGTGGGAGATCGGATCCTGGAAATCAACGGCACCCC
CATCCGGAACGTGCCGCTGGACGAGATCGACCTTCTGATCCAGGAGACCAGCCGCCTGCTGCAG
CTGACAATCGAGCACGACCCCCATGACTCGCTGGGCCAGGGGCCGCTGCCCACACACAGCCCCC
TGGGCTCCCCCGTGTGCACCCCCAGCGGAGAGGCGGGCAGTGCTCGGCAGAAGCCTGTCTTGAG
GAGCTGCAGCATCGACACGTCCCCGGGGGCCGGTTCTCTGGCCTCTCCCGCCTCCCTGCGCACA
GACCTGGGCCGCTCCGAGTCCCTGCGCGTCGTCTGCCGGCCGCACCGCATCTTCAGGCCGTCGG
ACCTCATCCACGGGGAGGTGCTGGGCAAGGGCTGCTTCGGCCAGGCCATCAAGGTGACACACCG
GGAGACGGGCGAGGTGATGGTGATGAAGGAGCTGATCCGGTTTGACGAGGAGACGCAGAGGACA
TTCCTCAAGGAGGTGAAGGTCATGCGGTGCCTGGAGCACCCCAACGTGCTCAGGTTCATCGGCG
TGCTCTACAAGGACAAGCGGCTCAACTTCATCACTGAGTACATCAAGGGGGGCACGCTGCGCGG
CATCATCAAGGCCATGGACAGCCAGTACCCGTGGAGCCAGAGGGTGAGCTTCGCCAAGGACATC
GCGTCGGGGATGGCCTACCTCCACTCCATGAACATCATCCACCGGGACCTCAACTCCCACAACT
GCCTGGTCCGTGAGAACAAGAACGTGGTGGTGGCCGACTTCGGGCTGGCGCGACTCATGGTGGA
TGACAAGACACAGCCCGAGGACCTTCGGAGCCTCAAGAAGCCAGACCGCAAGAAGCGGTACACG
GTGGTGGGGAACCCCTACTGGATGGCGCCCGAGATGATCAACGGCCGCAGCTATGATGAGAAGG
TGGATGTGTTCTCCTTCGGCATCGTCCTGTGCGAGATCATCGGGCGCGTGAACGCAGACCCCGA
CTACCTGCCCCGCACCATGGACTTTGGCCTTAACGTGAGAGGCTTCCTGGACCGCTACTGCCCC
CCCAACTGTCCCCCGAGCTTCTTCCCTATCACTGTGCGCTGCTGCGACCTGGACCCTGAGAAGA
GGCCATCCTTCGTGAAGCTGGAACAGTGGCTGGAGACCCTGCGCATGCACTTGGCCGGCCACTT
GCCTCTGGGTTCGCAGCTGGAACAGCTGGACAGGGCCTTCTGGGAGACCTACCGGCGGGGGGAG
AGCGGACTCCCTGCCCACCCCGAGGTCCCCGACTGAGACCCCTCCATAGCTGCCCGTCCCCACC
CTGGAGGATACGCCCTCGGCAGCTTCCCTCAAAGGTGGTGGCCAGGCCCTAATTGCCTTCTCCC
TGGACCGTGCCCCCGACCCTCTGCCTTGGCCCCCAGAGCTGCGCGTTCTGTCACGTCGCCCTGC
CCTACCTCCGTCTCGGAGGGGCTGCCACACTCTCCCGCATGAGCTGCAGGCCCGGTGAGCTGTG
CCCATCCCACAAACCGCCCCACCACCCCTTGGCCTGCACCTGTCTACACCGGCTCTGTGCGTTC
GACCGGAAGCAGACTCTGGAATGGCCCTGAAGGGGCTGGGCGTGGAGCTGTGTGCGTGCACGGA
AGGGGGCAGCCTTCCCAGGAGTCACGACCCCCGGGGTGTCTGGGGAGCAGCAGGGCAGGATGGA
TGCGACCCAACCCCAAAGCAGGCAGGGTCTGGCCCTGCATGCCGGCTGGCGATGTGGCAGGCCT
ATGTCCTGCCCGGGTCTCTTTTGTTTCTTTATCAAAGCCACTTTAGTGAGAAGCAGGTACAGGC
CTCAGGGTGAAGAGGGTCCCTTCAGGCAGAGGGGGTCCCGGCAGATAGAGGAGCCAGCCCAGGT
GGGGCGGGCAAGGCCAGCGTCCACCAGCAGCCCGGCTCTGCGTTCATCTCAGCGCCCCAGGCCC
TCCCGTCCTCGAGCCCCTCTGTCCTCTGGGTTCTTTCTGTGTAATCTATTTTTTAAGAAGAGTT
TGTATTATTTTTTCATACAGCCGCAGCAGCTGCTGCTGGGGGCTTGGGGTTTTATTTTTTGTGG
CGGGTGGGGGCGGGAGGGCCATCTTGTCACTTTGCCTCAGTTGAGCATCTAGGAAGTATTAAAA
CTGTGACGCTTTCTCAGTGCACTTTGAACCTGGAAAATAAGCCGAACGGGTCCACGGGACCACG
GTGGAGGGATGCAGTTTGTGGTCACCTCCACCCAGAACCCGGATGGCTATAGAACAGATCAAGA
CTCTGAACAATAAAATTCTGTGCTCCCCAAAC

hide sequence

Protein Sequences


Protein RefSeqs	XP_013376035	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000013743
	ENSCLAP00000013743.1
	ENSCLAP00000013744.1

RefSeq Acc Id:

XP_013376035 ⟸ XM_013520581

- UniProtKB:

A0A8C2VDF3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MRLTLLCCTWREERMGEEGSELPVCARCGQRIYDGQYLQALNADWHADCFRCCECGASLSHQYY
EKDGQLFCKKDYWARYGESCHGCSEHITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTLVE
HSKLYCGHCYYQTVVTPVIEQILPDSPGSHLPHTVTLVSIPASTHGKRGLSVSIDPPHGLPGCG
TEHSHTVRVQGVDPGCMSPDVKNSIHVGDRILEINGTPIRNVPLDEIDLLIQETSRLLQLTIEH
DPHDSLGQGPLPTHSPLGSPVCTPSGEAGSARQKPVLRSCSIDTSPGAGSLASPASLRTDLGRS
ESLRVVCRPHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEV
KVMRCLEHPNVLRFIGVLYKDKRLNFITEYIKGGTLRGIIKAMDSQYPWSQRVSFAKDIASGMA
YLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDDKTQPEDLRSLKKPDRKKRYTVVGNP
YWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPP
SFFPITVRCCDLDPEKRPSFVKLEQWLETLRMHLAGHLPLGSQLEQLDRAFWETYRRGESGLPA
HPEVPD

hide sequence

RefSeq Acc Id:

ENSCLAP00000013743 ⟸ ENSCLAT00000013898

RefSeq Acc Id:

ENSCLAP00000013744 ⟸ ENSCLAT00000013899

Protein Domains

LIM zinc-binding PDZ Protein kinase

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000009497	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000013898	ENTREZGENE
	ENSCLAT00000013898.1	UniProtKB/TrEMBL
	ENSCLAT00000013899.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.42.10	UniProtKB/TrEMBL
	Cysteine Rich Protein	UniProtKB/TrEMBL
	Transferase(Phosphotransferase) domain 1	UniProtKB/TrEMBL
InterPro	Kinase-like_dom_sf	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	PDZ_sf	UniProtKB/TrEMBL
	Prot_kinase_dom	UniProtKB/TrEMBL
	Protein_kinase_ATP_BS	UniProtKB/TrEMBL
	Ser-Thr/Tyr_kinase_cat_dom	UniProtKB/TrEMBL
	Znf_LIM	UniProtKB/TrEMBL
NCBI Gene	Limk1	ENTREZGENE
PANTHER	LIM DOMAIN KINASE 1	UniProtKB/TrEMBL
	LIM DOMAIN KINASE 1	UniProtKB/TrEMBL
Pfam	LIM	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	PK_Tyr_Ser-Thr	UniProtKB/TrEMBL
PRINTS	TYRKINASE	UniProtKB/TrEMBL
PROSITE	LIM_DOMAIN_1	UniProtKB/TrEMBL
	LIM_DOMAIN_2	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	PROTEIN_KINASE_ATP	UniProtKB/TrEMBL
	PROTEIN_KINASE_DOM	UniProtKB/TrEMBL
SMART	LIM	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
Superfamily-SCOP	Glucocorticoid receptor-like (DNA-binding domain)	UniProtKB/TrEMBL
	SSF50156	UniProtKB/TrEMBL
	SSF56112	UniProtKB/TrEMBL
UniProt	A0A8C2VDF3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2VJY5_CHILA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

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