Mid2 (midline 2) - Rat Genome Database

Name: Mid2
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Mid2 (midline 2) Chinchilla lanigera

Analyze

Symbol:

Mid2

Name:

midline 2

RGD ID:

8730998

Description:

ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN innate immune response (ortholog); negative regulation of viral entry into host cell (ortholog); negative regulation of viral transcription (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Charcot-Marie-Tooth disease type X (ortholog); esophageal atresia (ortholog); FOUND IN microtubule (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

probable E3 ubiquitin-protein ligase MID2

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MID2 (midline 2)	NCBI	Ortholog
Mus musculus (house mouse):	Mid2 (midline 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Mid2 (midline 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MID2 (midline 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MID2 (midline 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Mid2 (midline 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MID2 (midline 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MID2 (midline 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Mid2 (midline 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955490	7,973,211 - 8,088,427 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955490	7,977,771 - 8,168,912 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

Charcot-Marie-Tooth disease type X (ISO)

esophageal atresia (ISO)

genetic disease (ISO)

non-syndromic X-linked intellectual disability 101 (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

innate immune response (ISO)

negative regulation of viral entry into host cell (ISO)

negative regulation of viral transcription (ISO)

positive regulation of autophagy (ISO)

positive regulation of canonical NF-kappaB signal transduction (ISO)

protein localization to microtubule (ISO)

suppression of viral release by host (ISO)

Cellular Component

microtubule (ISO)

Molecular Function

enzyme binding (ISO)

identical protein binding (ISO)

microtubule binding (ISO)

phosphoprotein binding (ISO)

protein binding (ISO)

protein homodimerization activity (ISO)

transcription coactivator activity (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

Mid2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955490	7,973,211 - 8,088,427 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955490	7,977,771 - 8,168,912 (-)	NCBI	ChiLan1.0	ChiLan1.0

MID2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	107,825,735 - 107,931,637 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	107,825,755 - 107,931,637 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	107,068,965 - 107,174,867 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	106,956,116 - 107,057,077 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	X	107,540,045 - 107,645,826 (+)	NCBI		Celera
Cytogenetic Map	X	q22.3	NCBI
HuRef	X	96,692,632 - 96,797,758 (+)	NCBI		HuRef
CHM1_1	X	106,979,937 - 107,085,716 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	106,262,471 - 106,368,728 (+)	NCBI		T2T-CHM13v2.0

Mid2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	139,565,326 - 139,668,464 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	139,565,348 - 139,668,464 (+)	Ensembl		GRCm39 Ensembl
GRCm38	X	140,664,304 - 140,767,715 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	140,664,599 - 140,767,715 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	137,212,567 - 137,302,254 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	136,011,320 - 136,114,080 (+)	NCBI		MGSCv36	mm8
Celera	X	123,937,263 - 124,027,053 (+)	NCBI		Celera
Cytogenetic Map	X	F1	NCBI
cM Map	X	61.35	NCBI

Mid2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	109,143,057 - 109,245,257 (+)	NCBI		GRCr8
mRatBN7.2	X	104,354,692 - 104,456,757 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	104,355,316 - 104,453,473 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	106,484,643 - 106,582,790 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	109,983,989 - 110,082,138 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	107,531,877 - 107,629,899 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	112,019,897 - 112,121,980 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	112,020,646 - 112,121,943 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	52,479,569 - 52,581,663 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	128,496,689 - 128,595,233 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	3	43,484,990 - 43,583,167 (-)	NCBI		Celera
Cytogenetic Map	X	q33	NCBI

MID2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	107,301,285 - 107,405,554 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	107,304,702 - 107,413,484 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	96,917,731 - 97,026,545 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	107,290,776 - 107,393,162 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	107,290,776 - 107,393,162 (+)	Ensembl	panpan1.1		panPan2

MID2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	81,267,037 - 81,467,613 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	81,296,249 - 81,463,210 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	67,387,281 - 67,588,271 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	82,914,364 - 83,116,618 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	82,942,999 - 83,112,209 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	80,374,592 - 80,575,813 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	82,086,451 - 82,288,627 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	81,878,438 - 82,081,198 (+)	NCBI		UU_Cfam_GSD_1.0

Mid2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	80,731,399 - 80,828,234 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936499	6,829,729 - 6,926,571 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936499	6,833,328 - 6,926,531 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MID2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	88,294,067 - 88,393,742 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	88,294,032 - 88,394,885 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	102,730,773 - 102,831,117 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MID2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	95,664,705 - 95,760,256 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	95,665,380 - 95,764,762 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666065	20,771,575 - 20,871,556 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mid2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624803	8,536,953 - 8,650,805 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624803	8,536,946 - 8,650,775 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005404684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005404685	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005404688	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005404690	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013504523	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01060270	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01060271	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01060272	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01060273	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01060274	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01060275	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01060276	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDI01017966	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000001741 ⟹ ENSCLAP00000001698

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955490	7,973,211 - 8,088,427 (-)	Ensembl

RefSeq Acc Id:

ENSCLAT00000001742 ⟹ ENSCLAP00000001699

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955490	7,977,771 - 8,087,308 (-)	Ensembl

RefSeq Acc Id:

XM_005404684 ⟹ XP_005404741

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955490	7,977,771 - 8,168,912 (-)	NCBI

Sequence:

show sequence

TTGCTATGTAGAATTGGCTGGCCTTGAACTCGCAGTAATCCTCTTGCCTCAACCTACTGAGTGC
TGAGTTTCAAAGTGTGCATCACCACACATGGCAGAGTTTCACTGGTTGTGGCACTGCTATCAAG
CTGGACTGAAAACTGCCGTTTGTACACTGTTGCACCATATTGAACAACTTGACAGTTCTAAGTA
GAGATTTCTTTGTGGAGCTGAAATATCGTAATAGAGCTGTTGCTGAAAAGGCTATGAAGTTCTT
AAACAGGACCTGCCTGGATGATCTTATCATTTGCACAGATTCGGGGGTGAAAGCCCAGCCTCTG
TGGTTCTTAATGCCTCAGCAGGATTATTTTCACTAAAGATGGAAACACTGGAGTCTGAATTGAC
CTGTCCAATCTGCCTTGAATTGTTTGAAGACCCCCTGTTGCTCCCTTGTGCGCATAGCCTGTGT
TTCAACTGTGCCCATCGCATCTTGGTCTCAAACTGCAGCTCTGGTGAAACCATTGAACCTCTCA
CTGCTTTCCAGTGTCCTACATGCAGATATGTTATCTCACTGAACCACAGGGGCCTGGATGGCCT
CAAGAGGAACGTGACCTTGCAGAACATTATTGATCGCTTCCAGAAGGCTTCAGTCAGTGGGCCC
AATTCCCCAAGTGAGAACCGACGGGAAAGGATTTATAGGCCCAGTTCCGCCATGTCTAGTGAGC
GAATTGCTTGCCAATTCTGTGAGCAGGACCCACCAAGGGATGCAGTGAAGACTTGCATCACCTG
TGAGGTCTCCTACTGTGACCGTTGCCTGCGGGCCACGCACCCCAACAAGAAACCTTTCACCAGC
CATCGCCTGGTGGAACCAGTGCCAGACACACATCTTCGAGGGATTACCTGCCTGGACCATGAGA
ACGAGAAAGTGAACATGTACTGTGTGTCTGATGACCAGTTGATCTGTGCCTTATGCAAACTAGT
GGGTCGTCACCGAGACCATCAAGTCGCATCCTTGAATGATCGATTTGAGAAACTCAAGCAAACC
CTGGAGATGAACCTCACCAACCTGGTTAAGCGCAACAGTGAACTAGAAAATCAAATGGCCAAAC
TAATACAGATCTGCCAGCAGGTTGAGGTGAATACTGCTATGCATGAGGCAAAACTTATGGAAGA
ATGTGACGAGTTGGTAGAGATCATCCAGCAGAGGAAACAAATGATTGCTGTCAAAATCAAAGAG
ACAAAGGTTATGAAACTGAGAAAGTTAGCCCAGCAGGTTGCTAATTGTCGTCAGTGTCTTGAAC
GGTCAACAGTCCTCATCAATCAAGCTGAGCATATCCTAAAAGAAAACGACCAGGCACGGTTTCT
ACAGTCTGCAAAAAATATTGCTGAGCGAGTCGCTATGGCAACTGCATCTTCTCAAGTTCTGATT
CCAGATATCAATTTTAATGATGCCTTTGAAAACTTTGCTTTAGATTTTTCTAGAGAAAAGAAAC
TATTGGAGGGGCTAGACTATTTAACAGCCCCCAATCCACCCTCTATCCGAGAGGAACTCTGTAC
TGCCTCCCATGACACGATTACAGTCCACTGGATCTCGGATGATGAGTTCAGCATCAGCTCCTAT
GAGCTTCAGTACACCATATTCACTGGCCAGGCTAACTTCATCAGTAAGTCATGGTGTAGTTGGG
GCCTGTGGCCAGAGATAAGGAAATGTAAGGAAGCAGTAAGCTGCTCAAGATTGGCCGGGGCGCC
ACGAGGCCTGTATAACTCAGTGGATAGCTGGATGATTGTGCCCAATATTAAACAAAACCATTAC
ACCGTACATGGACTCCAGAGCGGGACACGCTATATCTTCATTGTTAAAGCCATAAACCAAGCAG
GCAGCCGGAACAGTGAACCTACCCGACTAAAAACAAACAGTCAACCCTTTAAACTGGATCCCAA
AATGACTCACAGAAAGTTGAAGATCTCCAACGATGGATTGCAGATGGAGAAGGATGAAAGTTCT
CTGAAGAAAAGCCACACCCCAGAGAGATTTAGTGGTACAGGATGCTATGGGGCAGCAGGAAATA
TATTCATTGACAGTGGCTGCCATTATTGGGAAGTAGTCATGGGTTCTTCAACATGGTATGCAAT
TGGTATTGCCTACAAATCTGCTCCAAAGAATGAATGGATTGGCAAGAATGCTTCCTCATGGGTC
TTCTCTCGCTGCAACAGTAACTTCGTGGTGAGACATAACAATAAGGAAATGCTGGTGGATGTGC
CTCCACAGTTGAAGCGTCTGGGTGTCCTCCTGGATTATGACAACAACATGCTGTCTTTCTACGA
CCCGGCTAACTCTCTACATCTTCATACTTTTGATGTGACCTTCATCCTTCCAGTTTGTCCAACA
TTCACAATCTGGAACAAATCCCTAATGATCCTGTCCGGCTTGCCTGCCCCAGATTTTATTGATT
ACCCTGAGCGGCAGGAATGCAACTGCAGGCCTCAAGAATCCCCTTACGTTTCTGGGATGAAAGC
TTGCCATTAAGTTTCAAGAAAGCATATACTTCACTGGCTATCCAGTTTAGCAGTTCTTCCCTTC
TTAAACCTCAGTTAGTGTTCAATATATGAGATACAAAATAAAGTTCATTTGAAGCATCCAAAA

hide sequence

RefSeq Acc Id:

XM_005404685 ⟹ XP_005404742

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955490	7,977,771 - 8,083,956 (-)	NCBI

Sequence:

show sequence

AGCCAGTGAGAAGATCAAATGAAGTGGTGTAGGACAAGAAATTCCAACTCCAGTTATCCCCCTG
AGCAGACAGCTAGTCCTTTTTCATTGCCTTTCTCTCCAAGGGTGAAAGCCCAGCCTCTGTGGTT
CTTAATGCCTCAGCAGGATTATTTTCACTAAAGATGGAAACACTGGAGTCTGAATTGACCTGTC
CAATCTGCCTTGAATTGTTTGAAGACCCCCTGTTGCTCCCTTGTGCGCATAGCCTGTGTTTCAA
CTGTGCCCATCGCATCTTGGTCTCAAACTGCAGCTCTGGTGAAACCATTGAACCTCTCACTGCT
TTCCAGTGTCCTACATGCAGATATGTTATCTCACTGAACCACAGGGGCCTGGATGGCCTCAAGA
GGAACGTGACCTTGCAGAACATTATTGATCGCTTCCAGAAGGCTTCAGTCAGTGGGCCCAATTC
CCCAAGTGAGAACCGACGGGAAAGGATTTATAGGCCCAGTTCCGCCATGTCTAGTGAGCGAATT
GCTTGCCAATTCTGTGAGCAGGACCCACCAAGGGATGCAGTGAAGACTTGCATCACCTGTGAGG
TCTCCTACTGTGACCGTTGCCTGCGGGCCACGCACCCCAACAAGAAACCTTTCACCAGCCATCG
CCTGGTGGAACCAGTGCCAGACACACATCTTCGAGGGATTACCTGCCTGGACCATGAGAACGAG
AAAGTGAACATGTACTGTGTGTCTGATGACCAGTTGATCTGTGCCTTATGCAAACTAGTGGGTC
GTCACCGAGACCATCAAGTCGCATCCTTGAATGATCGATTTGAGAAACTCAAGCAAACCCTGGA
GATGAACCTCACCAACCTGGTTAAGCGCAACAGTGAACTAGAAAATCAAATGGCCAAACTAATA
CAGATCTGCCAGCAGGTTGAGGTGAATACTGCTATGCATGAGGCAAAACTTATGGAAGAATGTG
ACGAGTTGGTAGAGATCATCCAGCAGAGGAAACAAATGATTGCTGTCAAAATCAAAGAGACAAA
GGTTATGAAACTGAGAAAGTTAGCCCAGCAGGTTGCTAATTGTCGTCAGTGTCTTGAACGGTCA
ACAGTCCTCATCAATCAAGCTGAGCATATCCTAAAAGAAAACGACCAGGCACGGTTTCTACAGT
CTGCAAAAAATATTGCTGAGCGAGTCGCTATGGCAACTGCATCTTCTCAAGTTCTGATTCCAGA
TATCAATTTTAATGATGCCTTTGAAAACTTTGCTTTAGATTTTTCTAGAGAAAAGAAACTATTG
GAGGGGCTAGACTATTTAACAGCCCCCAATCCACCCTCTATCCGAGAGGAACTCTGTACTGCCT
CCCATGACACGATTACAGTCCACTGGATCTCGGATGATGAGTTCAGCATCAGCTCCTATGAGCT
TCAGTACACCATATTCACTGGCCAGGCTAACTTCATCAGTAAGTCATGGTGTAGTTGGGGCCTG
TGGCCAGAGATAAGGAAATGTAAGGAAGCAGTAAGCTGCTCAAGATTGGCCGGGGCGCCACGAG
GCCTGTATAACTCAGTGGATAGCTGGATGATTGTGCCCAATATTAAACAAAACCATTACACCGT
ACATGGACTCCAGAGCGGGACACGCTATATCTTCATTGTTAAAGCCATAAACCAAGCAGGCAGC
CGGAACAGTGAACCTACCCGACTAAAAACAAACAGTCAACCCTTTAAACTGGATCCCAAAATGA
CTCACAGAAAGTTGAAGATCTCCAACGATGGATTGCAGATGGAGAAGGATGAAAGTTCTCTGAA
GAAAAGCCACACCCCAGAGAGATTTAGTGGTACAGGATGCTATGGGGCAGCAGGAAATATATTC
ATTGACAGTGGCTGCCATTATTGGGAAGTAGTCATGGGTTCTTCAACATGGTATGCAATTGGTA
TTGCCTACAAATCTGCTCCAAAGAATGAATGGATTGGCAAGAATGCTTCCTCATGGGTCTTCTC
TCGCTGCAACAGTAACTTCGTGGTGAGACATAACAATAAGGAAATGCTGGTGGATGTGCCTCCA
CAGTTGAAGCGTCTGGGTGTCCTCCTGGATTATGACAACAACATGCTGTCTTTCTACGACCCGG
CTAACTCTCTACATCTTCATACTTTTGATGTGACCTTCATCCTTCCAGTTTGTCCAACATTCAC
AATCTGGAACAAATCCCTAATGATCCTGTCCGGCTTGCCTGCCCCAGATTTTATTGATTACCCT
GAGCGGCAGGAATGCAACTGCAGGCCTCAAGAATCCCCTTACGTTTCTGGGATGAAAGCTTGCC
ATTAAGTTTCAAGAAAGCATATACTTCACTGGCTATCCAGTTTAGCAGTTCTTCCCTTCTTAAA
CCTCAGTTAGTGTTCAATATATGAGATACAAAATAAAGTTCATTTGAAGCATCCAAAA

hide sequence

RefSeq Acc Id:

XM_005404688 ⟹ XP_005404745

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955490	7,977,771 - 8,087,308 (-)	NCBI

Sequence:

show sequence

GTGCTGTGGTGCGGGGGCGGCGGCGGCGGCGGCGGCGGCAGCGAAGGAGGCCCGGGAGCTCGCG
CGGGAGCCCGAGCCAGCTTGCTGCGGAAGCAGGCGAGCGTCGGGCGCTCTGGAGCGCGCGTAGG
AGATGGCTGGCACCCGGGAACGCTACGGGTGAAAGCCCAGCCTCTGTGGTTCTTAATGCCTCAG
CAGGATTATTTTCACTAAAGATGGAAACACTGGAGTCTGAATTGACCTGTCCAATCTGCCTTGA
ATTGTTTGAAGACCCCCTGTTGCTCCCTTGTGCGCATAGCCTGTGTTTCAACTGTGCCCATCGC
ATCTTGGTCTCAAACTGCAGCTCTGGTGAAACCATTGAACCTCTCACTGCTTTCCAGTGTCCTA
CATGCAGATATGTTATCTCACTGAACCACAGGGGCCTGGATGGCCTCAAGAGGAACGTGACCTT
GCAGAACATTATTGATCGCTTCCAGAAGGCTTCAGTCAGTGGGCCCAATTCCCCAAGTGAGAAC
CGACGGGAAAGGATTTATAGGCCCAGTTCCGCCATGTCTAGTGAGCGAATTGCTTGCCAATTCT
GTGAGCAGGACCCACCAAGGGATGCAGTGAAGACTTGCATCACCTGTGAGGTCTCCTACTGTGA
CCGTTGCCTGCGGGCCACGCACCCCAACAAGAAACCTTTCACCAGCCATCGCCTGGTGGAACCA
GTGCCAGACACACATCTTCGAGGGATTACCTGCCTGGACCATGAGAACGAGAAAGTGAACATGT
ACTGTGTGTCTGATGACCAGTTGATCTGTGCCTTATGCAAACTAGTGGGTCGTCACCGAGACCA
TCAAGTCGCATCCTTGAATGATCGATTTGAGAAACTCAAGCAAACCCTGGAGATGAACCTCACC
AACCTGGTTAAGCGCAACAGTGAACTAGAAAATCAAATGGCCAAACTAATACAGATCTGCCAGC
AGGTTGAGGTGAATACTGCTATGCATGAGGCAAAACTTATGGAAGAATGTGACGAGTTGGTAGA
GATCATCCAGCAGAGGAAACAAATGATTGCTGTCAAAATCAAAGAGACAAAGGTTATGAAACTG
AGAAAGTTAGCCCAGCAGGTTGCTAATTGTCGTCAGTGTCTTGAACGGTCAACAGTCCTCATCA
ATCAAGCTGAGCATATCCTAAAAGAAAACGACCAGGCACGGTTTCTACAGTCTGCAAAAAATAT
TGCTGAGCGAGTCGCTATGGCAACTGCATCTTCTCAAGTTCTGATTCCAGATATCAATTTTAAT
GATGCCTTTGAAAACTTTGCTTTAGATTTTTCTAGAGAAAAGAAACTATTGGAGGGGCTAGACT
ATTTAACAGCCCCCAATCCACCCTCTATCCGAGAGGAACTCTGTACTGCCTCCCATGACACGAT
TACAGTCCACTGGATCTCGGATGATGAGTTCAGCATCAGCTCCTATGAGCTTCAGTACACCATA
TTCACTGGCCAGGCTAACTTCATCAGTAAGTCATGGTGTAGTTGGGGCCTGTGGCCAGAGATAA
GGAAATGTAAGGAAGCAGTAAGCTGCTCAAGATTGGCCGGGGCGCCACGAGGCCTGTATAACTC
AGTGGATAGCTGGATGATTGTGCCCAATATTAAACAAAACCATTACACCGTACATGGACTCCAG
AGCGGGACACGCTATATCTTCATTGTTAAAGCCATAAACCAAGCAGGCAGCCGGAACAGTGAAC
CTACCCGACTAAAAACAAACAGTCAACCCTTTAAACTGGATCCCAAAATGACTCACAGAAAGTT
GAAGATCTCCAACGATGGATTGCAGATGGAGAAGGATGAAAGTTCTCTGAAGAAAAGCCACACC
CCAGAGAGATTTAGTGGTACAGGATGCTATGGGGCAGCAGGAAATATATTCATTGACAGTGGCT
GCCATTATTGGGAAGTAGTCATGGGTTCTTCAACATGGTATGCAATTGGTATTGCCTACAAATC
TGCTCCAAAGAATGAATGGATTGGCAAGAATGCTTCCTCATGGGTCTTCTCTCGCTGCAACAGT
AACTTCGTGGTGAGACATAACAATAAGGAAATGCTGGTGGATGTGCCTCCACAGTTGAAGCGTC
TGGGTGTCCTCCTGGATTATGACAACAACATGCTGTCTTTCTACGACCCGGCTAACTCTCTACA
TCTTCATACTTTTGATGTGACCTTCATCCTTCCAGTTTGTCCAACATTCACAATCTGGAACAAA
TCCCTAATGATCCTGTCCGGCTTGCCTGCCCCAGATTTTATTGATTACCCTGAGCGGCAGGAAT
GCAACTGCAGGCCTCAAGAATCCCCTTACGTTTCTGGGATGAAAGCTTGCCATTAAGTTTCAAG
AAAGCATATACTTCACTGGCTATCCAGTTTAGCAGTTCTTCCCTTCTTAAACCTCAGTTAGTGT
TCAATATATGAGATACAAAATAAAGTTCATTTGAAGCATCCAAAA

hide sequence

RefSeq Acc Id:

XM_005404690 ⟹ XP_005404747

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955490	7,977,771 - 8,087,852 (-)	NCBI

Sequence:

show sequence

ACACACAAACGCGCGCGCCCGCGCGCGCGCGTGCATGCCCGCTCGGGCCCCTCTCGGTGTGTCT
TCGTTCAAGATGACAGGGCACTGGAGAAAAGGCTGCTGGAATCAGCTGGTGAAAGCCCAGCCTC
TGTGGTTCTTAATGCCTCAGCAGGATTATTTTCACTAAAGATGGAAACACTGGAGTCTGAATTG
ACCTGTCCAATCTGCCTTGAATTGTTTGAAGACCCCCTGTTGCTCCCTTGTGCGCATAGCCTGT
GTTTCAACTGTGCCCATCGCATCTTGGTCTCAAACTGCAGCTCTGGTGAAACCATTGAACCTCT
CACTGCTTTCCAGTGTCCTACATGCAGATATGTTATCTCACTGAACCACAGGGGCCTGGATGGC
CTCAAGAGGAACGTGACCTTGCAGAACATTATTGATCGCTTCCAGAAGGCTTCAGTCAGTGGGC
CCAATTCCCCAAGTGAGAACCGACGGGAAAGGATTTATAGGCCCAGTTCCGCCATGTCTAGTGA
GCGAATTGCTTGCCAATTCTGTGAGCAGGACCCACCAAGGGATGCAGTGAAGACTTGCATCACC
TGTGAGGTCTCCTACTGTGACCGTTGCCTGCGGGCCACGCACCCCAACAAGAAACCTTTCACCA
GCCATCGCCTGGTGGAACCAGTGCCAGACACACATCTTCGAGGGATTACCTGCCTGGACCATGA
GAACGAGAAAGTGAACATGTACTGTGTGTCTGATGACCAGTTGATCTGTGCCTTATGCAAACTA
GTGGGTCGTCACCGAGACCATCAAGTCGCATCCTTGAATGATCGATTTGAGAAACTCAAGCAAA
CCCTGGAGATGAACCTCACCAACCTGGTTAAGCGCAACAGTGAACTAGAAAATCAAATGGCCAA
ACTAATACAGATCTGCCAGCAGGTTGAGGTGAATACTGCTATGCATGAGGCAAAACTTATGGAA
GAATGTGACGAGTTGGTAGAGATCATCCAGCAGAGGAAACAAATGATTGCTGTCAAAATCAAAG
AGACAAAGGTTATGAAACTGAGAAAGTTAGCCCAGCAGGTTGCTAATTGTCGTCAGTGTCTTGA
ACGGTCAACAGTCCTCATCAATCAAGCTGAGCATATCCTAAAAGAAAACGACCAGGCACGGTTT
CTACAGTCTGCAAAAAATATTGCTGAGCGAGTCGCTATGGCAACTGCATCTTCTCAAGTTCTGA
TTCCAGATATCAATTTTAATGATGCCTTTGAAAACTTTGCTTTAGATTTTTCTAGAGAAAAGAA
ACTATTGGAGGGGCTAGACTATTTAACAGCCCCCAATCCACCCTCTATCCGAGAGGAACTCTGT
ACTGCCTCCCATGACACGATTACAGTCCACTGGATCTCGGATGATGAGTTCAGCATCAGCTCCT
ATGAGCTTCAGTACACCATATTCACTGGCCAGGCTAACTTCATCAGTAAGTCATGGTGTAGTTG
GGGCCTGTGGCCAGAGATAAGGAAATGTAAGGAAGCAGTAAGCTGCTCAAGATTGGCCGGGGCG
CCACGAGGCCTGTATAACTCAGTGGATAGCTGGATGATTGTGCCCAATATTAAACAAAACCATT
ACACCGTACATGGACTCCAGAGCGGGACACGCTATATCTTCATTGTTAAAGCCATAAACCAAGC
AGGCAGCCGGAACAGTGAACCTACCCGACTAAAAACAAACAGTCAACCCTTTAAACTGGATCCC
AAAATGACTCACAGAAAGTTGAAGATCTCCAACGATGGATTGCAGATGGAGAAGGATGAAAGTT
CTCTGAAGAAAAGCCACACCCCAGAGAGATTTAGTGGTACAGGATGCTATGGGGCAGCAGGAAA
TATATTCATTGACAGTGGCTGCCATTATTGGGAAGTAGTCATGGGTTCTTCAACATGGTATGCA
ATTGGTATTGCCTACAAATCTGCTCCAAAGAATGAATGGATTGGCAAGAATGCTTCCTCATGGG
TCTTCTCTCGCTGCAACAGTAACTTCGTGGTGAGACATAACAATAAGGAAATGCTGGTGGATGT
GCCTCCACAGTTGAAGCGTCTGGGTGTCCTCCTGGATTATGACAACAACATGCTGTCTTTCTAC
GACCCGGCTAACTCTCTACATCTTCATACTTTTGATGTGACCTTCATCCTTCCAGTTTGTCCAA
CATTCACAATCTGGAACAAATCCCTAATGATCCTGTCCGGCTTGCCTGCCCCAGATTTTATTGA
TTACCCTGAGCGGCAGGAATGCAACTGCAGGCCTCAAGAATCCCCTTACGTTTCTGGGATGAAA
GCTTGCCATTAAGTTTCAAGAAAGCATATACTTCACTGGCTATCCAGTTTAGCAGTTCTTCCCT
TCTTAAACCTCAGTTAGTGTTCAATATATGAGATACAAAATAAAGTTCATTTGAAGCATCCAAA
A

hide sequence

RefSeq Acc Id:

XM_013504523 ⟹ XP_013359977

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955490	7,977,771 - 8,074,820 (-)	NCBI

Sequence:

show sequence

GTGAAAGCCCAGCCTCTGTGGTTCTTAATGCCTCAGCAGGATTATTTTCACTAAAGATGGAAAC
ACTGGAGTCTGAATTGACCTGTCCAATCTGCCTTGAATTGTTTGAAGACCCCCTGTTGCTCCCT
TGTGCGCATAGCCTGTGTTTCAACTGTGCCCATCGCATCTTGGTCTCAAACTGCAGCTCTGGTG
AAACCATTGAACCTCTCACTGCTTTCCAGTGTCCTACATGCAGATATGTTATCTCACTGAACCA
CAGGGGCCTGGATGGCCTCAAGAGGAACGTGACCTTGCAGAACATTATTGATCGCTTCCAGAAG
GCTTCAGTCAGTGGGCCCAATTCCCCAAGTGAGAACCGACGGGAAAGGATTTATAGGCCCAGTT
CCGCCATGTCTAGTGAGCGAATTGCTTGCCAATTCTGTGAGCAGGACCCACCAAGGGATGCAGT
GAAGACTTGCATCACCTGTGAGGTCTCCTACTGTGACCGTTGCCTGCGGGCCACGCACCCCAAC
AAGAAACCTTTCACCAGCCATCGCCTGGTGGAACCAGTGCCAGACACACATCTTCGAGGGATTA
CCTGCCTGGACCATGAGAACGAGAAAGTGAACATGTACTGTGTGTCTGATGACCAGTTGATCTG
TGCCTTATGCAAACTAGTGGGTCGTCACCGAGACCATCAAGTCGCATCCTTGAATGATCGATTT
GAGAAACTCAAGCAAACCCTGGAGATGAACCTCACCAACCTGGTTAAGCGCAACAGTGAACTAG
AAAATCAAATGGCCAAACTAATACAGATCTGCCAGCAGGTTGAGGTGAATACTGCTATGCATGA
GGCAAAACTTATGGAAGAATGTGACGAGTTGGTAGAGATCATCCAGCAGAGGAAACAAATGATT
GCTGTCAAAATCAAAGAGACAAAGGTTATGAAACTGAGAAAGTTAGCCCAGCAGGTTGCTAATT
GTCGTCAGTGTCTTGAACGGTCAACAGTCCTCATCAATCAAGCTGAGCATATCCTAAAAGAAAA
CGACCAGGCACGGTTTCTACAGTCTGCAAAAAATATTGCTGAGCGAGTCGCTATGGCAACTGCA
TCTTCTCAAGTTCTGATTCCAGATATCAATTTTAATGATGCCTTTGAAAACTTTGCTTTAGATT
TTTCTAGAGAAAAGAAACTATTGGAGGGGCTAGACTATTTAACAGCCCCCAATCCACCCTCTAT
CCGAGAGGAACTCTGTACTGCCTCCCATGACACGATTACAGTCCACTGGATCTCGGATGATGAG
TTCAGCATCAGCTCCTATGAGCTTCAGTACACCATATTCACTGGCCAGGCTAACTTCATCAGCC
TGTATAACTCAGTGGATAGCTGGATGATTGTGCCCAATATTAAACAAAACCATTACACCGTACA
TGGACTCCAGAGCGGGACACGCTATATCTTCATTGTTAAAGCCATAAACCAAGCAGGCAGCCGG
AACAGTGAACCTACCCGACTAAAAACAAACAGTCAACCCTTTAAACTGGATCCCAAAATGACTC
ACAGAAAGTTGAAGATCTCCAACGATGGATTGCAGATGGAGAAGGATGAAAGTTCTCTGAAGAA
AAGCCACACCCCAGAGAGATTTAGTGGTACAGGATGCTATGGGGCAGCAGGAAATATATTCATT
GACAGTGGCTGCCATTATTGGGAAGTAGTCATGGGTTCTTCAACATGGTATGCAATTGGTATTG
CCTACAAATCTGCTCCAAAGAATGAATGGATTGGCAAGAATGCTTCCTCATGGGTCTTCTCTCG
CTGCAACAGTAACTTCGTGGTGAGACATAACAATAAGGAAATGCTGGTGGATGTGCCTCCACAG
TTGAAGCGTCTGGGTGTCCTCCTGGATTATGACAACAACATGCTGTCTTTCTACGACCCGGCTA
ACTCTCTACATCTTCATACTTTTGATGTGACCTTCATCCTTCCAGTTTGTCCAACATTCACAAT
CTGGAACAAATCCCTAATGATCCTGTCCGGCTTGCCTGCCCCAGATTTTATTGATTACCCTGAG
CGGCAGGAATGCAACTGCAGGCCTCAAGAATCCCCTTACGTTTCTGGGATGAAAGCTTGCCATT
AAGTTTCAAGAAAGCATATACTTCACTGGCTATCCAGTTTAGCAGTTCTTCCCTTCTTAAACCT
CAGTTAGTGTTCAATATATGAGATACAAAATAAAGTTCATTTGAAGCATCCAAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005404741	(Get FASTA)	NCBI Sequence Viewer
	XP_005404742	(Get FASTA)	NCBI Sequence Viewer
	XP_005404745	(Get FASTA)	NCBI Sequence Viewer
	XP_005404747	(Get FASTA)	NCBI Sequence Viewer
	XP_013359977	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000001698
	ENSCLAP00000001698.1
	ENSCLAP00000001699
	ENSCLAP00000001699.1

RefSeq Acc Id:	XP_005404741 ⟸ XM_005404684
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2UJ56 (UniProtKB/TrEMBL)
- Sequence:	show sequence METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSNCSSGETIEPLTAFQCPTCRYVIS LNHRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSENRRERIYRPSSAMSSERIACQFCEQDPPR DAVKTCITCEVSYCDRCLRATHPNKKPFTSHRLVEPVPDTHLRGITCLDHENEKVNMYCVSDDQ LICALCKLVGRHRDHQVASLNDRFEKLKQTLEMNLTNLVKRNSELENQMAKLIQICQQVEVNTA MHEAKLMEECDELVEIIQQRKQMIAVKIKETKVMKLRKLAQQVANCRQCLERSTVLINQAEHIL KENDQARFLQSAKNIAERVAMATASSQVLIPDINFNDAFENFALDFSREKKLLEGLDYLTAPNP PSIREELCTASHDTITVHWISDDEFSISSYELQYTIFTGQANFISKSWCSWGLWPEIRKCKEAV SCSRLAGAPRGLYNSVDSWMIVPNIKQNHYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTN SQPFKLDPKMTHRKLKISNDGLQMEKDESSLKKSHTPERFSGTGCYGAAGNIFIDSGCHYWEVV MGSSTWYAIGIAYKSAPKNEWIGKNASSWVFSRCNSNFVVRHNNKEMLVDVPPQLKRLGVLLDY DNNMLSFYDPANSLHLHTFDVTFILPVCPTFTIWNKSLMILSGLPAPDFIDYPERQECNCRPQE SPYVSGMKACH hide sequence

RefSeq Acc Id:	XP_005404747 ⟸ XM_005404690
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2UJ56 (UniProtKB/TrEMBL)
- Sequence:	show sequence METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSNCSSGETIEPLTAFQCPTCRYVIS LNHRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSENRRERIYRPSSAMSSERIACQFCEQDPPR DAVKTCITCEVSYCDRCLRATHPNKKPFTSHRLVEPVPDTHLRGITCLDHENEKVNMYCVSDDQ LICALCKLVGRHRDHQVASLNDRFEKLKQTLEMNLTNLVKRNSELENQMAKLIQICQQVEVNTA MHEAKLMEECDELVEIIQQRKQMIAVKIKETKVMKLRKLAQQVANCRQCLERSTVLINQAEHIL KENDQARFLQSAKNIAERVAMATASSQVLIPDINFNDAFENFALDFSREKKLLEGLDYLTAPNP PSIREELCTASHDTITVHWISDDEFSISSYELQYTIFTGQANFISKSWCSWGLWPEIRKCKEAV SCSRLAGAPRGLYNSVDSWMIVPNIKQNHYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTN SQPFKLDPKMTHRKLKISNDGLQMEKDESSLKKSHTPERFSGTGCYGAAGNIFIDSGCHYWEVV MGSSTWYAIGIAYKSAPKNEWIGKNASSWVFSRCNSNFVVRHNNKEMLVDVPPQLKRLGVLLDY DNNMLSFYDPANSLHLHTFDVTFILPVCPTFTIWNKSLMILSGLPAPDFIDYPERQECNCRPQE SPYVSGMKACH hide sequence

RefSeq Acc Id:	XP_005404745 ⟸ XM_005404688
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2UJ56 (UniProtKB/TrEMBL)
- Sequence:	show sequence METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSNCSSGETIEPLTAFQCPTCRYVIS LNHRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSENRRERIYRPSSAMSSERIACQFCEQDPPR DAVKTCITCEVSYCDRCLRATHPNKKPFTSHRLVEPVPDTHLRGITCLDHENEKVNMYCVSDDQ LICALCKLVGRHRDHQVASLNDRFEKLKQTLEMNLTNLVKRNSELENQMAKLIQICQQVEVNTA MHEAKLMEECDELVEIIQQRKQMIAVKIKETKVMKLRKLAQQVANCRQCLERSTVLINQAEHIL KENDQARFLQSAKNIAERVAMATASSQVLIPDINFNDAFENFALDFSREKKLLEGLDYLTAPNP PSIREELCTASHDTITVHWISDDEFSISSYELQYTIFTGQANFISKSWCSWGLWPEIRKCKEAV SCSRLAGAPRGLYNSVDSWMIVPNIKQNHYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTN SQPFKLDPKMTHRKLKISNDGLQMEKDESSLKKSHTPERFSGTGCYGAAGNIFIDSGCHYWEVV MGSSTWYAIGIAYKSAPKNEWIGKNASSWVFSRCNSNFVVRHNNKEMLVDVPPQLKRLGVLLDY DNNMLSFYDPANSLHLHTFDVTFILPVCPTFTIWNKSLMILSGLPAPDFIDYPERQECNCRPQE SPYVSGMKACH hide sequence

RefSeq Acc Id:	XP_005404742 ⟸ XM_005404685
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2UJ56 (UniProtKB/TrEMBL)
- Sequence:	show sequence METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSNCSSGETIEPLTAFQCPTCRYVIS LNHRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSENRRERIYRPSSAMSSERIACQFCEQDPPR DAVKTCITCEVSYCDRCLRATHPNKKPFTSHRLVEPVPDTHLRGITCLDHENEKVNMYCVSDDQ LICALCKLVGRHRDHQVASLNDRFEKLKQTLEMNLTNLVKRNSELENQMAKLIQICQQVEVNTA MHEAKLMEECDELVEIIQQRKQMIAVKIKETKVMKLRKLAQQVANCRQCLERSTVLINQAEHIL KENDQARFLQSAKNIAERVAMATASSQVLIPDINFNDAFENFALDFSREKKLLEGLDYLTAPNP PSIREELCTASHDTITVHWISDDEFSISSYELQYTIFTGQANFISKSWCSWGLWPEIRKCKEAV SCSRLAGAPRGLYNSVDSWMIVPNIKQNHYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTN SQPFKLDPKMTHRKLKISNDGLQMEKDESSLKKSHTPERFSGTGCYGAAGNIFIDSGCHYWEVV MGSSTWYAIGIAYKSAPKNEWIGKNASSWVFSRCNSNFVVRHNNKEMLVDVPPQLKRLGVLLDY DNNMLSFYDPANSLHLHTFDVTFILPVCPTFTIWNKSLMILSGLPAPDFIDYPERQECNCRPQE SPYVSGMKACH hide sequence

RefSeq Acc Id:	XP_013359977 ⟸ XM_013504523
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2UJ59 (UniProtKB/TrEMBL)
- Sequence:	show sequence METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSNCSSGETIEPLTAFQCPTCRYVIS LNHRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSENRRERIYRPSSAMSSERIACQFCEQDPPR DAVKTCITCEVSYCDRCLRATHPNKKPFTSHRLVEPVPDTHLRGITCLDHENEKVNMYCVSDDQ LICALCKLVGRHRDHQVASLNDRFEKLKQTLEMNLTNLVKRNSELENQMAKLIQICQQVEVNTA MHEAKLMEECDELVEIIQQRKQMIAVKIKETKVMKLRKLAQQVANCRQCLERSTVLINQAEHIL KENDQARFLQSAKNIAERVAMATASSQVLIPDINFNDAFENFALDFSREKKLLEGLDYLTAPNP PSIREELCTASHDTITVHWISDDEFSISSYELQYTIFTGQANFISLYNSVDSWMIVPNIKQNHY TVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQPFKLDPKMTHRKLKISNDGLQMEKDESS LKKSHTPERFSGTGCYGAAGNIFIDSGCHYWEVVMGSSTWYAIGIAYKSAPKNEWIGKNASSWV FSRCNSNFVVRHNNKEMLVDVPPQLKRLGVLLDYDNNMLSFYDPANSLHLHTFDVTFILPVCPT FTIWNKSLMILSGLPAPDFIDYPERQECNCRPQESPYVSGMKACH hide sequence

RefSeq Acc Id:

ENSCLAP00000001698 ⟸ ENSCLAT00000001741

RefSeq Acc Id:

ENSCLAP00000001699 ⟸ ENSCLAT00000001742

Protein Domains

B box-type B30.2/SPRY COS Fibronectin type-III RING-type

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000001268	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000001741	ENTREZGENE
	ENSCLAT00000001741.1	UniProtKB/TrEMBL
	ENSCLAT00000001742	ENTREZGENE
	ENSCLAT00000001742.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.120.920	UniProtKB/TrEMBL
	2.60.40.10	UniProtKB/TrEMBL
	3.30.40.10	UniProtKB/TrEMBL
	4.10.830.40	UniProtKB/TrEMBL
	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	B30.2/SPRY	UniProtKB/TrEMBL
	B30.2/SPRY_sf	UniProtKB/TrEMBL
	Bbox_C	UniProtKB/TrEMBL
	Butyrophylin_SPRY	UniProtKB/TrEMBL
	ConA-like_dom_sf	UniProtKB/TrEMBL
	COS_domain	UniProtKB/TrEMBL
	FN3_dom	UniProtKB/TrEMBL
	FN3_sf	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	MID2_Bbox1_Zfn	UniProtKB/TrEMBL
	MID2_Bbox2_Zfn	UniProtKB/TrEMBL
	Midline-1_COS	UniProtKB/TrEMBL
	SPRY/PRY_TRIM1	UniProtKB/TrEMBL
	SPRY_dom	UniProtKB/TrEMBL
	Znf-RING_euk	UniProtKB/TrEMBL
	Znf_B-box	UniProtKB/TrEMBL
	Znf_RING	UniProtKB/TrEMBL
	Znf_RING/FYVE/PHD	UniProtKB/TrEMBL
	Znf_RING_CS	UniProtKB/TrEMBL
NCBI Gene	Mid2	ENTREZGENE
PANTHER	E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED	UniProtKB/TrEMBL
	PTHR24099:SF12	UniProtKB/TrEMBL
Pfam	COS	UniProtKB/TrEMBL
	fn3	UniProtKB/TrEMBL
	SPRY	UniProtKB/TrEMBL
	zf-B_box	UniProtKB/TrEMBL
	zf-RING_UBOX	UniProtKB/TrEMBL
PRINTS	BUTYPHLNCDUF	UniProtKB/TrEMBL
PROSITE	B302_SPRY	UniProtKB/TrEMBL
	COS	UniProtKB/TrEMBL
	FN3	UniProtKB/TrEMBL
	ZF_BBOX	UniProtKB/TrEMBL
	ZF_RING_1	UniProtKB/TrEMBL
	ZF_RING_2	UniProtKB/TrEMBL
SMART	BBC	UniProtKB/TrEMBL
	BBOX	UniProtKB/TrEMBL
	FN3	UniProtKB/TrEMBL
	RING	UniProtKB/TrEMBL
	SPRY	UniProtKB/TrEMBL
Superfamily-SCOP	B-box zinc-binding domain	UniProtKB/TrEMBL
	RING/U-box	UniProtKB/TrEMBL
	SSF49265	UniProtKB/TrEMBL
	SSF49899	UniProtKB/TrEMBL
UniProt	A0A8C2UJ56	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2UJ59	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM