Ccdc138 (coiled-coil domain containing 138)

Gene: Ccdc138 (coiled-coil domain containing 138) Chinchilla lanigera

Analyze

Symbol:

Ccdc138

Name:

coiled-coil domain containing 138

RGD ID:

8730705

Description:

ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 7 (ortholog); ectodermal dysplasia 10A (ortholog); ectodermal dysplasia 10B (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

coiled-coil domain-containing protein 138

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

NCBI Annotation Information:

Annotation category: partial on reference assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955470	12,251,682 - 12,305,973 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955470	12,249,279 - 12,305,099 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant distal hereditary motor neuronopathy 7 (ISO)

ectodermal dysplasia 10A (ISO)

ectodermal dysplasia 10B (ISO)

ENCEPHALOPATHY, ACUTE, INFECTION-INDUCED, SUSCEPTIBILITY TO, 3 (ISO)

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

protein binding (ISO)

References

Genomics

Comparative Map Data

Ccdc138
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955470	12,251,682 - 12,305,973 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955470	12,249,279 - 12,305,099 (+)	NCBI	ChiLan1.0	ChiLan1.0

CCDC138
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	108,786,750 - 108,885,485 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	108,786,757 - 108,885,477 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	109,403,206 - 109,501,941 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	108,769,651 - 108,859,279 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	2	103,713,196 - 103,802,791 (+)	NCBI		Celera
Cytogenetic Map	2	q13	NCBI
HuRef	2	103,001,686 - 103,091,278 (+)	NCBI		HuRef
CHM1_1	2	109,407,547 - 109,497,117 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	109,247,356 - 109,346,048 (+)	NCBI		T2T-CHM13v2.0

Ccdc138
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	58,333,523 - 58,412,066 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	58,333,770 - 58,412,066 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	58,497,699 - 58,576,244 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	58,497,948 - 58,576,244 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	57,960,685 - 58,038,992 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	57,893,327 - 57,971,601 (+)	NCBI		MGSCv36	mm8
MGSCv36	10	58,477,854 - 58,557,364 (+)	NCBI		MGSCv36	mm8
Cytogenetic Map	10	B4	NCBI
cM Map	10	29.35	NCBI

Ccdc138
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	27,037,256 - 27,115,454 (+)	NCBI		GRCr8
mRatBN7.2	20	26,493,624 - 26,572,367 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	26,495,235 - 26,572,376 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	20	28,076,784 - 28,158,053 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	28,078,500 - 28,157,071 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	29,897,919 - 29,975,893 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	37,181,926 - 37,269,631 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	20	27,943,945 - 28,023,299 (+)	NCBI		Celera
Cytogenetic Map	20	q11	NCBI

CCDC138
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	20,918,214 - 21,014,514 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	20,921,029 - 21,008,385 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	95,030,440 - 95,126,627 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	110,041,114 - 110,128,383 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	110,041,000 - 110,128,234 (+)	Ensembl	panpan1.1		panPan2

CCDC138
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	34,976,341 - 35,086,080 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	34,976,670 - 35,086,297 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	34,899,699 - 35,008,391 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	35,828,597 - 35,938,058 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	35,828,608 - 35,938,126 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	35,558,076 - 35,667,578 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	35,840,305 - 35,950,700 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	36,031,906 - 36,142,309 (-)	NCBI		UU_Cfam_GSD_1.0

Ccdc138
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	92,000,625 - 92,061,913 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936829	335,967 - 397,235 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936829	335,977 - 397,252 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CCDC138
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	47,470,709 - 47,523,529 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	47,470,649 - 47,525,606 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	49,632,032 - 49,688,845 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CCDC138
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	12,320,653 - 12,412,191 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	12,320,719 - 12,411,855 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666080	7,286,330 - 7,391,400 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ccdc138
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624749	11,924,803 - 11,973,743 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624749	11,924,869 - 11,974,072 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013522754	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013522755	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01052925	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01052926	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCE01123158	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01082256	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000016673 ⟹ ENSCLAP00000016509

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955470	12,251,682 - 12,305,973 (+)	Ensembl

RefSeq Acc Id:

XM_013522754 ⟹ XP_013378208

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955470	12,249,284 - 12,305,099 (+)	NCBI

Sequence:

show sequence

GCCGTTTGCCCTCTGGAGGGTGGGGCCGTTTTGCCTCGGCGCACATGCGCCGCGGAGTCCGCCT
CAGCGTCTCGCCCCGCCCGGCGTCCCGGGAGCCGAGCCTTTGCGTCAGCGCGCTGCCCGGCCCC
GGCGCCGGTTTGAACGCGGTTCCCTGGGAGACCGCCGAGCCGCGGCGAGCATGGAGCCGCGCGT
CGTGAAGCCGCCGGGGCAGGATTTGCTAGTGGAGCGTCTGAAGAGCCGCTACGGGCTCGGGGGC
GGCGGCGCCGGCGAGTATGAGTTTTCAAATTTCGATCAGGCTCAGTGTAAAAGAAGATCTCTGA
CCTACCCAGGTGATGTGGATGTCTGCTGCTCTGGAGATAAGGTCGGCTCATCAGGAAGATGTTA
TTCTGAGGAGAGGAGGCACTGTGTGATGCCTTTTTGCAGTTCATTCAAACACTTGGAGGGGAAT
CGCCTAGATGGTGAACTGGATTCTTTTCATGGTTTGAAGAAACAGGAAACAGAAGAAGAATTAA
TTGAAAATGATCATGGAGTTAATACCCCCACAATGACCAAGCGGTCCTTCAAAGAAATGGAAAA
AGTTGCCCTCCTGACGAACGCAGCCTCAGGACCTCGTGCTGAGTGGGGTGGCGATGCCAGAGAC
GTCCCTCTGCGGCGCACCGGCTGTCCAAACTTGAGAGTGTCACACAAGCAGGGTTTGCTTCCTC
CTCAGATAAATCAGATATATGAAGAGTTATTTCAGATTCACCTGAAGCTGCAGTGCGAGAGCGC
CGCCCAGCGGAACTTCGCGGAAGAGCTCCAGAGGCGAGAACGCTTTTTAACTGAGAGAGAACAA
CTGCTTTTCAGACATGAAGATGCCTTGAATAAAATCAAAGGTGTTGAGGAGGAGGTTCTCACAA
GATTTCAGATTATGAAGGAGCAACACAGTGCAGAAGTTGAACATTTAACTGAAGTTCTTAAGGA
GAGAAATAAAGAAAGCAAGAGACTGAGGTCCTCTTTTGATGCACTGAAAGAATTGAATGATAAC
TTAAAAAAACAGTTAAATGAAGTATGTGAAGAAAACAGGAAGATGGAGATTCAGGCGAAGAGAG
TTCAGGCCCGCTTAGATAACCTACAGAGGAAGTATGAATTTATGACAATACAGAGATTGAAAGG
AAGTTCCCATGCTGCTCATGAAATGAAAAGCTTAAAGCAAGAAAAAGTACCAGCTTCAAAAACT
TTTAAGGTACCACTTAATGGGCAGGTATATGAACTTCTAACTGTCTTCATGGACTGGATTTCGG
AACATCACCTTAGCAAAGTGAAACACGAAGAACCTGACGTGGATGGTGAAAAGCTGCCCCTCAA
ATCTGCTGCTCAGAGAAGTGATATTCAAGAGAAGTGTGTAAAGCTCTTGCCTGTGCTGACGGAG
CAGCTGCAGTGTCTGCCGCTGGTCAGTGCCCGGCTCCACGAGCCGCTCATCAGGTTCATCTACT
GGTCCCTCCGGCAGCTGGATGCAGGAGCGCAGCATTCAACTATGACATCAACATTGCGGCGATT
GGGTGAAGACATATTTAAAGGTGTGGTAATTAAAGGAGTTCAGGATAATTCTTCAGAGTATTCT
GTGGAGGTTAAACCAAAGACAGCTGCTTTTTTTAAGAGTGCGAATTTGCCATTGCGATTTTTAT
CAACCCTCATCGTTCTCAAAACAATCACTCAAGCTGACTACCTGGCCCAGGCGTTTGACTCCCT
TTGCGTGGACTTGAAGACAGATGAAGGGAAAGCCTTGTTTCTGGAGTACCAAGCAGTTCCAGTG
GTTCTGGGGCATCTGCGGATATCCAGCAAGGGCCTCCTCTCCAATGTCATTGACAGTTTGCTGC
AGATGACGGTAGAGTCCAAAGCTCTGCAACCTTTCCTGGAAGCCTGCAGCAACTCTTTATTTTT
TCGTACTTGTTCTGTGCTGCTTCGAACCCCTAAGCTTGATCTTCAGATCCTAGAAAAGCTCAGT
ATTATTCTCCAGAAACTTTCGAAAATCAAGAGTAACAAGAAGCTCTTTGAACTTTTTACCATTC
ACCTGATGCTTCAAGAGTTACAGCGGACCACGCATCCGGAGCACGCCTTCCTCTGCATCAACCT
GAACTCCACGCTGTTCAATTTGGGACTGACGAAAGGCAGCTGCCTGGCCTCCAGTGCAGGCCAT
TAGACTGGCTTGTTTATATTTCTACAGTATATATCTGTTGCTTAGTTGTAAAAAAGAAAACTCG
ACAAAGTAGCTGAAATTTTACCAAGTTACCAGTAACATCATTTATCATGACAGATAACCAGGAA
AATTTTTTCAGCTTGGTAAATGAAATCTGTAGGTGCTGTGGACTTTTTGAAATATTTTTTAAGG
TAATATGAATGTACAAGATGGCATTTCCAGAATTTATGACACTGGCATTACTTTTTATAAAAGT
ATCTTAGGAAAATTCTTTCTTAAAATTATGTCATTATTTGGAATAAAATTGGTGCTTATGGGGG
AACAGATAAACCATGTTTTCATAATATAGTAGAATCCTCCATTTGGGAGGCAAAGTATGTATTT
TCTAAGCTCTTTCTTCTTTCGTGGTGCTGAGGATCCAAGCCAGAGACTCACGCCTGCCAAGCAC
GTGCCCTGCCCGGAGCTGGCACCCTGGCTACAGCACATGCCCAAGCACTGGTCTTCATGTCACA
ACACACACCGTGACCTGTGGGTTCACCCAGGAAGCTGGGCTGGGTCAGCACTGAAAAATCAATT
AATGTGAGCATTCATGTGACAGGCCTAAGAATAAAGATCTTGTGATCGTA

hide sequence

RefSeq Acc Id:

XM_013522755 ⟹ XP_013378209

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955470	12,249,279 - 12,305,099 (+)	NCBI

Sequence:

show sequence

ACAGCGCCGTTTGCCCTCTGGAGGGTGGGGCCGTTTTGCCTCGGCGCACATGCGCCGCGGAGTC
CGCCTCAGCGTCTCGCCCCGCCCGGCGTCCCGGGAGCCGAGCCTTTGCGTCAGCGCGCTGCCCG
GCCCCGGCGCCGGTTTGAACGCGGTTCCCTGGGAGACCGCCGAGCCGCGGCGAGCATGGAGCCG
CGCGTCGTGAAGCCGCCGGGGCAGGATTTGCTAGTGGAGCGTCTGAAGAGCCGCTACGGGCTCG
GGGGCGGCGGCGCCGGCGAGTATGAGTTTTCAAATTTCGATCAGGCTCAGTGTAAAAGAAGATC
TCTGACCTACCCAGGTGATGTGGATGTCTGCTGCTCTGGAGATAAGGTCGGCTCATCAGGAAGA
TGTTATTCTGAGGAGAGGAGGCACTGTGTGATGCCTTTTTGCAGTTCATTCAAACACTTGGAGG
GGAATCGCCTAGATGGTGAACTGGATTCTTTTCATGGTTTGAAGAAACAGGAAACAGAAGAAGA
ATTAATTGAAAATGATCATGGAGTTAATACCCCCACAATGACCAAGCGGTCCTTCAAAGAAATG
GAAAAAGTTGCCCTCCTGACGAACGCAGCCTCAGGACCTCGTGCTGAGTGGGGTGGCGATGCCA
GAGACGTCCCTCTGCGGCGCACCGGCTGTCCAAACTTGAGAGTGTCACACAAGCAGGGTTTGCT
TCCTCCTCAGATAAATCAGATATATGAAGAGTTATTTCAGATTCACCTGAAGCTGCAGTGCGAG
AGCGCCGCCCAGCGGAACTTCGCGGAAGAGCTCCAGAGGCGAGAACGCTTTTTAACTGAGAGAG
AACAACTGCTTTTCAGACATGAAGATGCCTTGAATAAAATCAAAGGTGTTGAGGAGGAGGTTCT
CACAAGATTTCAGATTATGAAGGAGCAACACAGTGCAGAAGTTGAACATTTAACTGAAGTTCTT
AAGGAGAGAAATAAAGAAAGCAAGAGACTGAGGTCCTCTTTTGATGCACTGAAAGAATTGAATG
ATAACTTAAAAAAACAGTTAAATGAAGTATGTGAAGAAAACAGGAAGATGGAGATTCAGGCGAA
GAGAGTTCAGGCCCGCTTAGATAACCTACAGAGGAAGTATGAATTTATGACAATACAGAGATTG
AAAGGAAGTTCCCATGCTGCTCATGAAATGAAAAGCTTAAAGCAAGAAAAAGTACCAGCTTCAA
AAACTTTTAAGGTACCACTTAATGGGCAGGTATATGAACTTCTAACTGTCTTCATGGACTGGAT
TTCGGAACATCACCTTAGCAAAGTGAAACACGAAGAACCTGACGTGGATGGTGAAAAGCTGCCC
CTCAAATCTGCTGCTCAGAGAAGTGATATTCAAGAGAAGTGTGTAAAGCTCTTGCCTGTGCTGA
CGGAGCAGCTGCAGTGTCTGCCGCTGGTCAGTGCCCGGCTCCACGAGCCGCTCATCAGGTTCAT
CTACTGGTCCCTCCGGCAGCTGGATGCAGGAGCGCAGCATTCAACTATGACATCAACATTGCGG
CGATTGGGTGAAGACATATTTAAAGGTGTGGTAATTAAAGGAGTTCAGGATAATTCTTCAGAGT
ATTCTGTGGAGGTTAAACCAAAGACAGCTGCTTTTTTTAAGAGTGCGAATTTGCCATTGCGATT
TTTATCAACCCTCATCGTTCTCAAAACAATCACTCAAGAAGCTCTGCAACCTTTCCTGGAAGCC
TGCAGCAACTCTTTATTTTTTCGTACTTGTTCTGTGCTGCTTCGAACCCCTAAGCTTGATCTTC
AGATCCTAGAAAAGCTCAGTATTATTCTCCAGAAACTTTCGAAAATCAAGAGTAACAAGAAGCT
CTTTGAACTTTTTACCATTCACCTGATGCTTCAAGAGTTACAGCGGACCACGCATCCGGAGCAC
GCCTTCCTCTGCATCAACCTGAACTCCACGCTGTTCAATTTGGGACTGACGAAAGGCAGCTGCC
TGGCCTCCAGTGCAGGCCATTAGACTGGCTTGTTTATATTTCTACAGTATATATCTGTTGCTTA
GTTGTAAAAAAGAAAACTCGACAAAGTAGCTGAAATTTTACCAAGTTACCAGTAACATCATTTA
TCATGACAGATAACCAGGAAAATTTTTTCAGCTTGGTAAATGAAATCTGTAGGTGCTGTGGACT
TTTTGAAATATTTTTTAAGGTAATATGAATGTACAAGATGGCATTTCCAGAATTTATGACACTG
GCATTACTTTTTATAAAAGTATCTTAGGAAAATTCTTTCTTAAAATTATGTCATTATTTGGAAT
AAAATTGGTGCTTATGGGGGAACAGATAAACCATGTTTTCATAATATAGTAGAATCCTCCATTT
GGGAGGCAAAGTATGTATTTTCTAAGCTCTTTCTTCTTTCGTGGTGCTGAGGATCCAAGCCAGA
GACTCACGCCTGCCAAGCACGTGCCCTGCCCGGAGCTGGCACCCTGGCTACAGCACATGCCCAA
GCACTGGTCTTCATGTCACAACACACACCGTGACCTGTGGGTTCACCCAGGAAGCTGGGCTGGG
TCAGCACTGAAAAATCAATTAATGTGAGCATTCATGTGACAGGCCTAAGAATAAAGATCTTGTG
ATCGTA

hide sequence

Protein Sequences


Protein RefSeqs	XP_013378208	(Get FASTA)	NCBI Sequence Viewer
	XP_013378209	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000016509
	ENSCLAP00000016509.1

RefSeq Acc Id:	XP_013378209 ⟸ XM_013522755
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2VR40 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEPRVVKPPGQDLLVERLKSRYGLGGGGAGEYEFSNFDQAQCKRRSLTYPGDVDVCCSGDKVGS SGRCYSEERRHCVMPFCSSFKHLEGNRLDGELDSFHGLKKQETEEELIENDHGVNTPTMTKRSF KEMEKVALLTNAASGPRAEWGGDARDVPLRRTGCPNLRVSHKQGLLPPQINQIYEELFQIHLKL QCESAAQRNFAEELQRRERFLTEREQLLFRHEDALNKIKGVEEEVLTRFQIMKEQHSAEVEHLT EVLKERNKESKRLRSSFDALKELNDNLKKQLNEVCEENRKMEIQAKRVQARLDNLQRKYEFMTI QRLKGSSHAAHEMKSLKQEKVPASKTFKVPLNGQVYELLTVFMDWISEHHLSKVKHEEPDVDGE KLPLKSAAQRSDIQEKCVKLLPVLTEQLQCLPLVSARLHEPLIRFIYWSLRQLDAGAQHSTMTS TLRRLGEDIFKGVVIKGVQDNSSEYSVEVKPKTAAFFKSANLPLRFLSTLIVLKTITQEALQPF LEACSNSLFFRTCSVLLRTPKLDLQILEKLSIILQKLSKIKSNKKLFELFTIHLMLQELQRTTH PEHAFLCINLNSTLFNLGLTKGSCLASSAGH hide sequence

RefSeq Acc Id:	XP_013378208 ⟸ XM_013522754
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2VR40 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEPRVVKPPGQDLLVERLKSRYGLGGGGAGEYEFSNFDQAQCKRRSLTYPGDVDVCCSGDKVGS SGRCYSEERRHCVMPFCSSFKHLEGNRLDGELDSFHGLKKQETEEELIENDHGVNTPTMTKRSF KEMEKVALLTNAASGPRAEWGGDARDVPLRRTGCPNLRVSHKQGLLPPQINQIYEELFQIHLKL QCESAAQRNFAEELQRRERFLTEREQLLFRHEDALNKIKGVEEEVLTRFQIMKEQHSAEVEHLT EVLKERNKESKRLRSSFDALKELNDNLKKQLNEVCEENRKMEIQAKRVQARLDNLQRKYEFMTI QRLKGSSHAAHEMKSLKQEKVPASKTFKVPLNGQVYELLTVFMDWISEHHLSKVKHEEPDVDGE KLPLKSAAQRSDIQEKCVKLLPVLTEQLQCLPLVSARLHEPLIRFIYWSLRQLDAGAQHSTMTS TLRRLGEDIFKGVVIKGVQDNSSEYSVEVKPKTAAFFKSANLPLRFLSTLIVLKTITQADYLAQ AFDSLCVDLKTDEGKALFLEYQAVPVVLGHLRISSKGLLSNVIDSLLQMTVESKALQPFLEACS NSLFFRTCSVLLRTPKLDLQILEKLSIILQKLSKIKSNKKLFELFTIHLMLQELQRTTHPEHAF LCINLNSTLFNLGLTKGSCLASSAGH hide sequence

RefSeq Acc Id:

ENSCLAP00000016509 ⟸ ENSCLAT00000016673

Protein Domains

Coiled-coil Coiled-coil-domain-containing protein 138 coiled-

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000011354	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000016673	ENTREZGENE
	ENSCLAT00000016673.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.340	UniProtKB/TrEMBL
InterPro	CCDC138	UniProtKB/TrEMBL
	CCDC138_C	UniProtKB/TrEMBL
	CCDC138_cc	UniProtKB/TrEMBL
NCBI Gene	Ccdc138	ENTREZGENE
PANTHER	COILED-COIL DOMAIN-CONTAINING PROTEIN 138	UniProtKB/TrEMBL
	PTHR34523	UniProtKB/TrEMBL
Pfam	CCDC138_C	UniProtKB/TrEMBL
	CCDC138_cc	UniProtKB/TrEMBL
UniProt	A0A8C2VR40	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar