Fap (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955449 | 11,623,741 - 11,694,335 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955449 | 11,623,838 - 11,694,256 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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FAP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 2 | 162,170,684 - 162,243,445 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 162,170,684 - 162,245,151 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 2 | 163,027,194 - 163,099,955 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 162,735,446 - 162,808,291 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 2 | 162,852,708 - 162,925,552 | NCBI | | | | | Celera | 2 | 156,637,516 - 156,710,361 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | q24.2 | NCBI | | | | | HuRef | 2 | 154,909,562 - 154,982,406 (-) | NCBI | | HuRef | | | CHM1_1 | 2 | 163,033,090 - 163,105,931 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 162,627,338 - 162,700,099 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Fap (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 62,331,280 - 62,404,365 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 62,331,287 - 62,404,419 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 62,500,936 - 62,575,509 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 62,500,943 - 62,574,075 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 62,339,002 - 62,412,078 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 62,301,784 - 62,374,860 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 64,191,101 - 64,264,176 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | C1.3 | NCBI | | | | | cM Map | 2 | 35.85 | NCBI | | | | |
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Fap (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 67,547,398 - 67,616,271 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 47,138,823 - 47,207,671 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 47,138,813 - 47,225,545 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 50,493,843 - 50,562,306 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 59,077,377 - 59,145,833 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 56,850,389 - 56,919,037 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 48,467,781 - 48,536,242 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 48,467,781 - 48,536,235 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 55,133,418 - 55,201,844 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 44,457,151 - 44,525,602 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 44,353,522 - 44,421,639 (-) | NCBI | | | | | Celera | 3 | 46,780,390 - 46,848,693 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q21 | NCBI | | | | |
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FAP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 13 | 64,862,801 - 64,937,455 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2B | 64,877,776 - 64,951,037 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2B | 49,464,199 - 49,537,284 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2B | 166,832,669 - 166,905,515 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 2B | 166,832,963 - 166,904,950 (-) | Ensembl | panpan1.1 | | panPan2 | |
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FAP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 36 | 7,574,364 - 7,647,448 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 36 | 7,575,161 - 7,647,226 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 36 | 7,718,907 - 7,791,280 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 36 | 7,706,897 - 7,779,228 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 36 | 7,706,899 - 7,778,929 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 36 | 7,725,598 - 7,797,918 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 36 | 7,766,525 - 7,838,827 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 36 | 7,874,009 - 7,946,310 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Fap (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405303 | 124,728,654 - 124,802,072 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936469 | 16,817,232 - 16,888,773 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936469 | 16,817,000 - 16,889,066 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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FAP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 15 | 68,830,730 - 68,902,379 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 15 | 68,831,281 - 68,902,416 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 15 | 76,323,040 - 76,394,182 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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FAP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 10 | 47,578,164 - 47,652,179 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 10 | 47,577,888 - 47,652,689 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666040 | 151,875,647 - 151,947,663 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Fap (Heterocephalus glaber - naked mole-rat) |
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