Bola2b (bolA family member 2B) - Rat Genome Database

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Gene: Bola2b (bolA family member 2B) Chinchilla lanigera
Analyze
Symbol: Bola2b
Name: bolA family member 2B
RGD ID: 8726326
Description: INVOLVED IN [2Fe-2S] cluster assembly (ortholog); cell redox homeostasis (ortholog); intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); chromosome 16p11.2 deletion syndrome, 593-kb (ortholog); FOUND IN cytoplasm (ortholog); iron-sulfur cluster assembly complex (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: bolA homolog 2B; bolA-like protein 2
RGD Orthologs
Human
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554936,812,208 - 6,812,932 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Bola2b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554936,812,208 - 6,812,932 (+)NCBIChiLan1.0ChiLan1.0
BOLA2B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381630,192,932 - 30,193,666 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1630,192,932 - 30,194,306 (-)EnsemblGRCh38hg38GRCh38
GRCh371630,204,253 - 30,204,987 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361630,111,757 - 30,113,128 (-)NCBINCBI36Build 36hg18NCBI36
Cytogenetic Map16p11.2NCBI
HuRef1627,866,894 - 27,868,265 (-)NCBIHuRef
CHM1_11631,521,251 - 31,522,622 (-)NCBICHM1_1
T2T-CHM13v2.01630,477,482 - 30,478,216 (-)NCBIT2T-CHM13v2.0
BOLA2B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21830,935,431 - 30,936,292 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11635,289,545 - 35,290,418 (+)NCBINHGRI_mPanPan1
PanPan1.11630,560,586 - 30,561,956 (-)NCBIpanpan1.1PanPan1.1panPan2
BOLA2B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1618,170,106 - 18,171,012 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha619,748,630 - 19,749,536 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0618,306,109 - 18,307,015 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl618,306,110 - 18,306,964 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1618,104,923 - 18,105,829 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0618,020,332 - 18,021,238 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0618,336,159 - 18,337,066 (-)NCBIUU_Cfam_GSD_1.0
Bola2b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344124,237,375 - 124,254,370 (+)NCBIHiC_Itri_2
SpeTri2.0NW_00493650112,335,330 - 12,335,941 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BOLA2B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1318,345,691 - 18,351,508 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
BOLA2B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1526,478,391 - 26,479,775 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660683,067,650 - 3,069,097 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Bola2b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478213,103,842 - 13,104,823 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005405183   ⟹   XP_005405240
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554936,812,208 - 6,812,932 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005405240 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000021806
  ENSCLAP00000021806.1
Reference Protein Sequences
RefSeq Acc Id: XP_005405240   ⟸   XM_005405183
- UniProtKB: A0A8C2VWU7 (UniProtKB/TrEMBL)
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000014934 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000022009 ENTREZGENE
  ENSCLAT00000022009.1 UniProtKB/TrEMBL
InterPro BOL2 UniProtKB/TrEMBL
  BolA UniProtKB/TrEMBL
  BolA-like_sf UniProtKB/TrEMBL
NCBI Gene Bola2b ENTREZGENE
PANTHER BOLA-LIKE PROTEIN 2 UniProtKB/TrEMBL
  PTHR12735 UniProtKB/TrEMBL
Pfam BolA UniProtKB/TrEMBL
PIRSF BolA UniProtKB/TrEMBL
Superfamily-SCOP SSF82657 UniProtKB/TrEMBL
UniProt A0A8C2VWU7 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-08-25 Bola2b  bolA family member 2B    bolA homolog 2B (E. coli)  Symbol and/or name change 5135510 APPROVED