Prkag3 (protein kinase AMP-activated non-catalytic subunit gamma 3) - Rat Genome Database

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Gene: Prkag3 (protein kinase AMP-activated non-catalytic subunit gamma 3) Chinchilla lanigera
Analyze
Symbol: Prkag3
Name: protein kinase AMP-activated non-catalytic subunit gamma 3
RGD ID: 8722402
Description: ENCODES a protein that exhibits AMP-activated protein kinase activity (ortholog); protein kinase binding (ortholog); protein kinase regulator activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); negative regulation of glycogen biosynthetic process (ortholog); regulation of glycolytic process (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ASSOCIATED WITH alacrima, achalasia, and impaired intellectual development syndrome (ortholog); carbohydrate metabolic disorder (ortholog); cerebrotendinous xanthomatosis (ortholog); FOUND IN nucleotide-activated protein kinase complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 5'-AMP-activated protein kinase subunit gamma-3
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545314,584,412 - 14,595,369 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545314,584,405 - 14,594,112 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species

Genomics

Comparative Map Data
Prkag3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545314,584,412 - 14,595,369 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545314,584,405 - 14,594,112 (+)NCBIChiLan1.0ChiLan1.0
PRKAG3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382218,822,308 - 218,831,803 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2218,822,308 - 218,832,086 (-)EnsemblGRCh38hg38GRCh38
GRCh372219,687,031 - 219,696,526 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362219,395,350 - 219,404,756 (-)NCBINCBI36Build 36hg18NCBI36
Build 342219,512,610 - 219,522,017NCBI
Celera2213,454,874 - 213,464,282 (-)NCBICelera
Cytogenetic Map2q35NCBI
HuRef2211,540,231 - 211,549,639 (-)NCBIHuRef
CHM1_12219,694,004 - 219,703,412 (-)NCBICHM1_1
T2T-CHM13v2.02219,308,866 - 219,318,363 (-)NCBIT2T-CHM13v2.0
Prkag3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39174,778,062 - 74,788,623 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl174,778,081 - 74,788,380 (-)EnsemblGRCm39 Ensembl
GRCm38174,738,922 - 74,749,471 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl174,738,922 - 74,749,221 (-)EnsemblGRCm38mm10GRCm38
MGSCv37174,785,496 - 74,795,529 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36174,673,847 - 74,682,069 (-)NCBIMGSCv36mm8
Celera175,293,936 - 75,303,959 (-)NCBICelera
Cytogenetic Map1C4NCBI
cM Map138.54NCBI
Prkag3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8983,744,385 - 83,753,629 (-)NCBIGRCr8
mRatBN7.2976,295,715 - 76,304,959 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl976,295,715 - 76,304,959 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx984,740,945 - 84,750,169 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0989,869,884 - 89,879,109 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0988,256,055 - 88,265,279 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0981,999,368 - 82,008,620 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl981,999,376 - 82,008,620 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0981,761,758 - 81,771,204 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4974,069,811 - 74,079,055 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1974,218,387 - 74,226,036 (-)NCBI
Celera973,868,165 - 73,877,380 (-)NCBICelera
Cytogenetic Map9q33NCBI
PRKAG3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213121,456,805 - 121,466,253 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B121,471,685 - 121,481,194 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B106,085,299 - 106,139,298 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B224,679,831 - 224,687,705 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B224,679,831 - 224,687,705 (-)Ensemblpanpan1.1panPan2
PRKAG3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13725,405,794 - 25,414,745 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3725,406,190 - 25,414,961 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3726,224,582 - 26,234,936 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03725,420,002 - 25,430,360 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3725,420,003 - 25,429,619 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13725,324,688 - 25,335,026 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03725,259,422 - 25,269,780 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03725,280,219 - 25,290,581 (-)NCBIUU_Cfam_GSD_1.0
Prkag3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303174,912,850 - 174,925,361 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365691,259,105 - 1,266,925 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365691,258,678 - 1,266,925 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PRKAG3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15120,855,201 - 120,866,332 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115120,859,486 - 120,866,308 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215133,800,767 - 133,806,881 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap15qNCBI
PRKAG3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110104,717,144 - 104,732,005 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10104,718,680 - 104,730,005 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604094,669,341 - 94,678,530 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Prkag3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248236,184,801 - 6,192,654 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248236,184,970 - 6,196,535 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000013223   ⟹   ENSCLAP00000013072
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495545314,584,412 - 14,594,112 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000013224   ⟹   ENSCLAP00000013073
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495545314,584,454 - 14,595,369 (+)Ensembl
RefSeq Acc Id: XM_005395623   ⟹   XP_005395680
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545314,584,440 - 14,594,112 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005395624   ⟹   XP_005395681
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545314,584,488 - 14,594,112 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005395625   ⟹   XP_005395682
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545314,584,412 - 14,594,112 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005395626   ⟹   XP_005395683
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545314,584,440 - 14,594,112 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013519792   ⟹   XP_013375246
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545314,584,454 - 14,594,112 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013519793   ⟹   XP_013375247
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545314,584,470 - 14,594,112 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013519794   ⟹   XP_013375248
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545314,584,488 - 14,594,112 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013519795   ⟹   XP_013375249
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545314,584,405 - 14,594,112 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_005395683   ⟸   XM_005395626
- Peptide Label: isoform X4
- UniProtKB: A0A8C2VI89 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005395680   ⟸   XM_005395623
- Peptide Label: isoform X1
- UniProtKB: A0A8C2VI89 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005395682   ⟸   XM_005395625
- Peptide Label: isoform X3
- UniProtKB: A0A8C2VD02 (UniProtKB/TrEMBL),   A0A8C2VI89 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005395681   ⟸   XM_005395624
- Peptide Label: isoform X2
- UniProtKB: A0A8C2VI89 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013375249   ⟸   XM_013519795
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_013375246   ⟸   XM_013519792
- Peptide Label: isoform X1
- UniProtKB: A0A8C2VI89 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013375247   ⟸   XM_013519793
- Peptide Label: isoform X3
- UniProtKB: A0A8C2VD02 (UniProtKB/TrEMBL),   A0A8C2VI89 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013375248   ⟸   XM_013519794
- Peptide Label: isoform X5
- UniProtKB: A0A8C2VI89 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000013073   ⟸   ENSCLAT00000013224
RefSeq Acc Id: ENSCLAP00000013072   ⟸   ENSCLAT00000013223
Protein Domains
CBS


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000009025 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000013223 ENTREZGENE
  ENSCLAT00000013223.1 UniProtKB/TrEMBL
  ENSCLAT00000013224 ENTREZGENE
  ENSCLAT00000013224.1 UniProtKB/TrEMBL
Gene3D-CATH 3.10.580.10 UniProtKB/TrEMBL
InterPro CBS_dom UniProtKB/TrEMBL
  CBS_dom_sf UniProtKB/TrEMBL
NCBI Gene Prkag3 ENTREZGENE
PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT UniProtKB/TrEMBL
  PTHR13780:SF31 UniProtKB/TrEMBL
Pfam CBS UniProtKB/TrEMBL
PROSITE CBS UniProtKB/TrEMBL
SMART CBS UniProtKB/TrEMBL
Superfamily-SCOP SSF54631 UniProtKB/TrEMBL
UniProt A0A8C2VD02 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C2VI89 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Prkag3  protein kinase AMP-activated non-catalytic subunit gamma 3    protein kinase, AMP-activated, gamma 3 non-catalytic subunit  Symbol and/or name change 5135510 APPROVED