Rce1 (Ras converting CAAX endopeptidase 1) - Rat Genome Database

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Gene: Rce1 (Ras converting CAAX endopeptidase 1) Chinchilla lanigera
Analyze
Symbol: Rce1
Name: Ras converting CAAX endopeptidase 1
RGD ID: 8721618
Description: ENCODES a protein that exhibits endopeptidase activity (ortholog); exopeptidase activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); CAAX-box protein processing (ortholog); protein prenylation (ortholog); ASSOCIATED WITH Aicardi-Goutieres Syndrome 3 (ortholog); immunodeficiency 90 (ortholog); intellectual disability (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: CAAX prenyl protease 2; RCE1 homolog, prenyl protein protease
RGD Orthologs
Human
Mouse
Rat
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542218,538,251 - 18,541,863 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542218,538,251 - 18,541,322 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Rce1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542218,538,251 - 18,541,863 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542218,538,251 - 18,541,322 (-)NCBIChiLan1.0ChiLan1.0
RCE1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381166,843,441 - 66,846,552 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1166,842,835 - 66,846,552 (+)EnsemblGRCh38hg38GRCh38
GRCh371166,610,912 - 66,614,023 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361166,367,459 - 66,370,579 (+)NCBINCBI36Build 36hg18NCBI36
Build 341166,367,458 - 66,370,593NCBI
Celera1163,932,529 - 63,942,408 (+)NCBICelera
Cytogenetic Map11q13.2NCBI
HuRef1162,938,810 - 62,941,930 (+)NCBIHuRef
CHM1_11166,494,482 - 66,497,602 (+)NCBICHM1_1
T2T-CHM13v2.01166,839,715 - 66,842,826 (+)NCBIT2T-CHM13v2.0
Rce1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39194,672,621 - 4,675,673 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl194,672,619 - 4,675,669 (-)EnsemblGRCm39 Ensembl
GRCm38194,622,593 - 4,625,645 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl194,622,591 - 4,625,641 (-)EnsemblGRCm38mm10GRCm38
MGSCv37194,622,551 - 4,625,617 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36194,622,551 - 4,625,617 (-)NCBIMGSCv36mm8
Celera194,493,733 - 4,496,801 (-)NCBICelera
Cytogenetic Map19ANCBI
cM Map194.07NCBI
Rce1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81211,328,769 - 211,345,944 (-)NCBIGRCr8
mRatBN7.21201,899,358 - 201,902,593 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1201,899,358 - 201,902,484 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1210,252,277 - 210,255,378 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01217,344,776 - 217,347,876 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01210,035,796 - 210,038,896 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01219,860,826 - 219,863,933 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1219,860,827 - 219,863,926 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01226,727,306 - 226,730,408 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41207,213,714 - 207,216,814 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11207,367,140 - 207,370,280 (-)NCBI
Celera1199,440,250 - 199,443,350 (-)NCBICelera
Cytogenetic Map1q43NCBI
RCE1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11850,509,426 - 50,512,575 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1850,509,768 - 50,517,543 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1849,119,262 - 49,122,411 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01851,459,602 - 51,462,746 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1851,459,175 - 51,567,491 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11850,644,038 - 50,647,186 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01850,223,403 - 50,226,550 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01851,013,154 - 51,016,302 (-)NCBIUU_Cfam_GSD_1.0
Rce1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049476,352,600 - 6,355,772 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365992,793,215 - 2,798,707 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365992,794,947 - 2,798,121 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RCE1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl25,588,546 - 5,593,142 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.125,587,853 - 5,595,408 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.224,610,472 - 4,615,152 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RCE1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.117,420,221 - 7,526,495 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl17,420,653 - 7,423,265 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038104,707,800 - 104,712,956 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rce1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476719,602,603 - 19,605,668 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476719,602,603 - 19,605,671 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSCLAT00000023365   ⟹   ENSCLAP00000023144
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495542218,538,251 - 18,541,863 (-)Ensembl
RefSeq Acc Id: XM_005384377   ⟹   XP_005384434
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542218,538,251 - 18,541,320 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013513907   ⟹   XP_013369361
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542218,538,824 - 18,541,322 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013513908   ⟹   XP_013369362
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542218,538,251 - 18,540,941 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005384434 (Get FASTA)   NCBI Sequence Viewer  
  XP_013369361 (Get FASTA)   NCBI Sequence Viewer  
  XP_013369362 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000023144
  ENSCLAP00000023144.1
RefSeq Acc Id: XP_005384434   ⟸   XM_005384377
- Peptide Label: isoform X1
- UniProtKB: A0A8C2W004 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013369362   ⟸   XM_013513908
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_013369361   ⟸   XM_013513907
- Peptide Label: isoform X2
- Sequence:
Ensembl Acc Id: ENSCLAP00000023144   ⟸   ENSCLAT00000023365


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000015888 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000023365 ENTREZGENE
  ENSCLAT00000023365.1 UniProtKB/TrEMBL
InterPro Rce1 UniProtKB/TrEMBL
  Rce1-like UniProtKB/TrEMBL
NCBI Gene Rce1 ENTREZGENE
PANTHER CAAX PRENYL PROTEASE 2 UniProtKB/TrEMBL
  PTHR13046 UniProtKB/TrEMBL
Pfam Rce1-like UniProtKB/TrEMBL
UniProt A0A8C2W004 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-08-25 Rce1  Ras converting CAAX endopeptidase 1    RCE1 homolog, prenyl protein protease (S. cerevisiae)  Symbol and/or name change 5135510 APPROVED