Il17rd (interleukin 17 receptor D) - Rat Genome Database

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Gene: Il17rd (interleukin 17 receptor D) Chinchilla lanigera
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Symbol: Il17rd
Name: interleukin 17 receptor D
RGD ID: 8720467
Description: INVOLVED IN negative regulation of epithelial to mesenchymal transition (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); arteriovenous malformations of the brain (ortholog); Brain Injuries (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: interleukin-17 receptor D
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554306,848,820 - 6,898,704 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554306,842,756 - 6,873,195 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References


Genomics

Comparative Map Data
Il17rd
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554306,848,820 - 6,898,704 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554306,842,756 - 6,873,195 (-)NCBIChiLan1.0ChiLan1.0
IL17RD
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl357,089,982 - 57,170,306 (-)EnsemblGRCh38hg38GRCh38
GRCh38357,089,982 - 57,170,317 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37357,124,010 - 57,204,345 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36357,099,050 - 57,179,374 (-)NCBINCBI36hg18NCBI36
Build 34357,103,317 - 57,179,353NCBI
Celera357,089,588 - 57,164,961 (-)NCBI
Cytogenetic Map3p14.3NCBI
HuRef357,172,083 - 57,248,123 (-)NCBIHuRef
CHM1_1357,074,359 - 57,154,567 (-)NCBICHM1_1
Il17rd
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391426,760,921 - 26,829,243 (+)NCBIGRCm39mm39
GRCm39 Ensembl1426,760,898 - 26,829,243 (+)Ensembl
GRCm381427,038,964 - 27,107,286 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1427,038,941 - 27,107,286 (+)EnsemblGRCm38mm10GRCm38
MGSCv371427,852,187 - 27,920,472 (+)NCBIGRCm37mm9NCBIm37
MGSCv361425,865,966 - 25,929,393 (+)NCBImm8
Celera1423,308,506 - 23,339,406 (+)NCBICelera
Cytogenetic Map14A3NCBI
Il17rd
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2162,228,467 - 2,295,126 (+)NCBI
Rnor_6.0 Ensembl162,670,618 - 2,731,808 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0162,670,471 - 2,737,271 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0162,642,868 - 2,709,804 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4162,291,838 - 2,354,927 (+)NCBIRGSC3.4rn4RGSC3.4
Celera162,194,794 - 2,255,588 (+)NCBICelera
Cytogenetic Map16p16NCBI
IL17RD
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1358,234,422 - 58,309,480 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl358,240,835 - 58,309,409 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0357,023,622 - 57,098,869 (-)NCBIMhudiblu_PPA_v0panPan3
IL17RD
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12033,240,728 - 33,306,727 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2033,240,767 - 33,303,404 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2033,168,071 - 33,234,132 (+)NCBI
ROS_Cfam_1.02033,512,962 - 33,579,003 (+)NCBI
UMICH_Zoey_3.12032,961,714 - 33,027,878 (+)NCBI
UNSW_CanFamBas_1.02033,320,255 - 33,386,452 (+)NCBI
UU_Cfam_GSD_1.02033,491,831 - 33,557,800 (+)NCBI
Il17rd
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118174,303,076 - 174,369,286 (-)NCBI
SpeTri2.0NW_0049364737,447,292 - 7,507,819 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IL17RD
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1338,939,279 - 39,006,690 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11338,935,631 - 39,006,721 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21342,822,716 - 42,917,594 (-)NCBISscrofa10.2Sscrofa10.2susScr3
IL17RD
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12218,416,143 - 18,489,855 (-)NCBI
ChlSab1.1 Ensembl2218,416,443 - 18,434,271 (-)Ensembl
Il17rd
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624822150,955 - 219,939 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000005927   ⟹   ENSCLAP00000005826
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554306,848,820 - 6,898,704 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000005928   ⟹   ENSCLAP00000005827
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554306,848,820 - 6,873,897 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000005929   ⟹   ENSCLAP00000005828
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554306,848,820 - 6,873,897 (-)Ensembl
RefSeq Acc Id: XM_013515704   ⟹   XP_013371158
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554306,842,756 - 6,873,195 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013371158 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013371158   ⟸   XM_013515704
- Sequence:
RefSeq Acc Id: ENSCLAP00000005828   ⟸   ENSCLAT00000005929
RefSeq Acc Id: ENSCLAP00000005827   ⟸   ENSCLAT00000005928
RefSeq Acc Id: ENSCLAP00000005826   ⟸   ENSCLAT00000005927


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000004131 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000005826 ENTREZGENE
Ensembl Transcript ENSCLAT00000005927 ENTREZGENE
NCBI Gene Il17rd ENTREZGENE