Prex2 (phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2) - Rat Genome Database

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Gene: Prex2 (phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2) Chinchilla lanigera
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Symbol: Prex2
Name: phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
RGD ID: 8713191
Description: ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); dendrite morphogenesis (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); head and neck squamous cell carcinoma (ortholog); Klatskin's tumor (ortholog); FOUND IN plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544411,154,318 - 11,414,075 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544411,154,318 - 11,414,680 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References


Genomics

Comparative Map Data
Prex2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544411,154,318 - 11,414,075 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544411,154,318 - 11,414,680 (-)NCBIChiLan1.0ChiLan1.0
PREX2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl867,952,046 - 68,237,032 (+)EnsemblGRCh38hg38GRCh38
GRCh38867,951,918 - 68,237,032 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37868,864,281 - 69,149,267 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36869,027,157 - 69,306,451 (+)NCBINCBI36hg18NCBI36
Build 34869,027,156 - 69,180,208NCBI
Celera864,857,879 - 65,137,147 (+)NCBI
Cytogenetic Map8q13.2NCBI
HuRef864,357,585 - 64,636,285 (+)NCBIHuRef
CHM1_1868,920,204 - 69,204,707 (+)NCBICHM1_1
Prex2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39111,063,496 - 11,373,907 (+)NCBIGRCm39mm39
GRCm39 Ensembl111,063,689 - 11,373,905 (+)Ensembl
GRCm38110,993,273 - 11,303,683 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl110,993,465 - 11,303,681 (+)EnsemblGRCm38mm10GRCm38
MGSCv37110,983,546 - 11,293,763 (+)NCBIGRCm37mm9NCBIm37
MGSCv36111,243,254 - 11,284,089 (+)NCBImm8
MGSCv36111,320,283 - 11,360,870 (+)NCBImm8
Celera110,967,661 - 11,280,694 (+)NCBICelera
Cytogenetic Map1A2NCBI
Prex2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.257,937,692 - 8,253,112 (-)NCBI
Rnor_6.0 Ensembl57,627,771 - 7,941,822 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.057,622,668 - 7,941,715 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0512,446,043 - 12,761,369 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.457,404,475 - 7,693,459 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.157,366,703 - 7,728,758 (-)NCBI
Celera57,493,673 - 7,724,174 (-)NCBICelera
Cytogenetic Map5q11NCBI
PREX2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1866,150,970 - 66,434,518 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl866,215,974 - 66,430,138 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0864,489,817 - 64,769,602 (+)NCBIMhudiblu_PPA_v0panPan3
PREX2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12917,458,098 - 17,738,069 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2917,458,281 - 17,735,170 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2917,773,929 - 18,057,994 (+)NCBI
ROS_Cfam_1.02917,543,026 - 17,827,957 (+)NCBI
UMICH_Zoey_3.12917,589,003 - 17,873,821 (+)NCBI
UNSW_CanFamBas_1.02917,666,595 - 17,943,382 (+)NCBI
UU_Cfam_GSD_1.02917,936,353 - 18,212,814 (+)NCBI
Prex2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530368,501,144 - 68,796,617 (+)NCBI
SpeTri2.0NW_0049364966,005,410 - 6,284,332 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PREX2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl466,715,234 - 67,116,135 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1466,712,412 - 66,996,258 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2472,703,372 - 72,929,160 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PREX2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1863,781,892 - 64,061,222 (+)NCBI
ChlSab1.1 Ensembl863,781,948 - 64,060,864 (+)Ensembl
Prex2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474422,941,194 - 23,208,987 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000004103   ⟹   ENSCLAP00000004022
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495544411,154,318 - 11,414,075 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000004104   ⟹   ENSCLAP00000004023
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495544411,155,940 - 11,386,560 (-)Ensembl
RefSeq Acc Id: XM_005392120   ⟹   XP_005392177
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495544411,154,318 - 11,414,680 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005392177 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005392177   ⟸   XM_005392120
- Sequence:
RefSeq Acc Id: ENSCLAP00000004022   ⟸   ENSCLAT00000004103
RefSeq Acc Id: ENSCLAP00000004023   ⟸   ENSCLAT00000004104


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000002871 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000004022 ENTREZGENE
Ensembl Transcript ENSCLAT00000004103 ENTREZGENE
NCBI Gene Prex2 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Prex2  phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2    phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2  Symbol and/or name change 5135510 APPROVED