Tasor2 (transcription activation suppressor family member 2) - Rat Genome Database

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Gene: Tasor2 (transcription activation suppressor family member 2) Chinchilla lanigera
Analyze
Symbol: Tasor2
Name: transcription activation suppressor family member 2
RGD ID: 8701375
Description: ASSOCIATED WITH genetic disease (ortholog); hypoparathyroidism-deafness-renal disease syndrome (ortholog); schizophrenia (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Fam208b; family with sequence similarity 208 member B; family with sequence similarity 208, member B
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542122,401,983 - 22,447,453 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542122,381,295 - 22,448,115 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytosol  (ISO)
nucleoplasm  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Tasor2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542122,401,983 - 22,447,453 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542122,381,295 - 22,448,115 (+)NCBIChiLan1.0ChiLan1.0
TASOR2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38105,684,838 - 5,763,740 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl105,684,731 - 5,763,779 (+)EnsemblGRCh38hg38GRCh38
GRCh37105,726,801 - 5,805,703 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36105,766,807 - 5,846,949 (+)NCBINCBI36Build 36hg18NCBI36
Celera105,657,202 - 5,736,083 (+)NCBICelera
Cytogenetic Map10p15.1NCBI
HuRef105,656,947 - 5,735,843 (+)NCBIHuRef
CHM1_1105,726,741 - 5,805,643 (+)NCBICHM1_1
T2T-CHM13v2.0105,688,634 - 5,767,529 (+)NCBIT2T-CHM13v2.0
Tasor2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39133,615,905 - 3,661,108 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl133,616,035 - 3,661,108 (-)EnsemblGRCm39 Ensembl
GRCm38133,566,035 - 3,612,884 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl133,566,035 - 3,611,108 (-)EnsemblGRCm38mm10GRCm38
MGSCv37133,565,281 - 3,610,354 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36133,564,239 - 3,610,354 (-)NCBIMGSCv36mm8
Celera133,555,678 - 3,600,714 (-)NCBICelera
Cytogenetic Map13A1NCBI
cM Map131.99NCBI
Tasor2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81771,504,656 - 71,559,878 (+)NCBIGRCr8
mRatBN7.21766,583,554 - 66,650,127 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1766,594,908 - 66,649,135 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01770,245,672 - 70,299,056 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1770,262,363 - 70,297,751 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01771,948,197 - 72,003,681 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41777,806,664 - 77,842,055 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1766,100,013 - 66,154,697 (+)NCBICelera
Cytogenetic Map17q12.2NCBI
TASOR2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2818,237,908 - 18,317,213 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11018,243,210 - 18,322,537 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0105,725,568 - 5,804,846 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1105,710,325 - 5,789,159 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl105,710,427 - 5,789,150 (+)Ensemblpanpan1.1panPan2
TASOR2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1230,170,539 - 30,244,738 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl230,170,994 - 30,244,726 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha227,200,035 - 27,274,035 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0230,550,701 - 30,624,767 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl230,550,722 - 30,624,789 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1227,647,387 - 27,721,494 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0228,483,732 - 28,557,771 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0229,202,041 - 29,276,162 (-)NCBIUU_Cfam_GSD_1.0
Tasor2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934432,611,513 - 32,687,008 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364848,777,440 - 8,815,985 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364848,776,232 - 8,842,265 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TASOR2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1065,197,584 - 65,252,646 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11065,197,581 - 65,268,473 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21071,313,318 - 71,372,116 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TASOR2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.195,795,849 - 5,874,740 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl95,825,192 - 5,874,013 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605111,098,009 - 11,179,473 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tasor2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624775625,515 - 697,534 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624775612,758 - 698,067 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000009852   ⟹   ENSCLAP00000009723
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495542122,401,983 - 22,447,453 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000009853   ⟹   ENSCLAP00000009724
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495542122,401,983 - 22,447,453 (+)Ensembl
RefSeq Acc Id: XM_005383842   ⟹   XP_005383899
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542122,381,295 - 22,448,115 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005383843   ⟹   XP_005383900
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542122,382,181 - 22,448,115 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005383844   ⟹   XP_005383901
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542122,381,295 - 22,448,115 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005383845   ⟹   XP_005383902
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542122,404,150 - 22,448,115 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005383846   ⟹   XP_005383903
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542122,381,295 - 22,447,140 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005383847   ⟹   XP_005383904
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542122,381,295 - 22,448,115 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013513662   ⟹   XP_013369116
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542122,390,603 - 22,448,115 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013513663   ⟹   XP_013369117
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542122,409,900 - 22,448,115 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013513664   ⟹   XP_013369118
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542122,381,295 - 22,448,115 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_005383899   ⟸   XM_005383842
- Peptide Label: isoform X1
- UniProtKB: A0A8C2VA34 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005383904   ⟸   XM_005383847
- Peptide Label: isoform X3
- UniProtKB: A0A8C2V4P6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005383901   ⟸   XM_005383844
- Peptide Label: isoform X1
- UniProtKB: A0A8C2VA34 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005383903   ⟸   XM_005383846
- Peptide Label: isoform X2
- UniProtKB: A0A8C2VA34 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005383900   ⟸   XM_005383843
- Peptide Label: isoform X1
- UniProtKB: A0A8C2VA34 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005383902   ⟸   XM_005383845
- Peptide Label: isoform X1
- UniProtKB: A0A8C2VA34 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013369118   ⟸   XM_013513664
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_013369116   ⟸   XM_013513662
- Peptide Label: isoform X1
- UniProtKB: A0A8C2VA34 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013369117   ⟸   XM_013513663
- Peptide Label: isoform X1
- UniProtKB: A0A8C2VA34 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000009723   ⟸   ENSCLAT00000009852
RefSeq Acc Id: ENSCLAP00000009724   ⟸   ENSCLAT00000009853
Protein Domains
DUF3715   Golgi associated RAB2 interactor protein-like Rab2B-


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000006738 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000009852 ENTREZGENE
  ENSCLAT00000009852.1 UniProtKB/TrEMBL
  ENSCLAT00000009853 ENTREZGENE
  ENSCLAT00000009853.1 UniProtKB/TrEMBL
InterPro DUF3699 UniProtKB/TrEMBL
  DUF3715 UniProtKB/TrEMBL
  TASOR UniProtKB/TrEMBL
NCBI Gene Fam208b ENTREZGENE
PANTHER PROTEIN TASOR 2 UniProtKB/TrEMBL
  PTHR16207 UniProtKB/TrEMBL
Pfam DUF3699 UniProtKB/TrEMBL
  DUF3715 UniProtKB/TrEMBL
UniProt A0A8C2V4P6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C2VA34 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-12-25 Tasor2  transcription activation suppressor family member 2  Fam208b  family with sequence similarity 208 member B  Symbol and/or name change 5135510 APPROVED
2016-08-16 Fam208b  family with sequence similarity 208 member B    family with sequence similarity 208, member B  Symbol and/or name change 5135510 APPROVED