Stra8 (stimulated by retinoic acid 8)

Gene: Stra8 (stimulated by retinoic acid 8) Chinchilla lanigera

Analyze

Symbol:

Stra8

Name:

stimulated by retinoic acid 8

RGD ID:

8699748

Description:

INVOLVED IN activation of meiosis (ortholog); cellular response to retinoic acid (ortholog); male germ-line stem cell asymmetric division (ortholog); ASSOCIATED WITH genetic disease (ortholog); pleomorphic xanthoastrocytoma (ortholog); FOUND IN cytoplasm (ortholog); male germ cell nucleus (ortholog); nucleus (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

stimulated by retinoic acid gene 8 protein homolog

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955494	7,408,421 - 7,444,383 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955494	7,408,479 - 7,444,154 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

pleomorphic xanthoastrocytoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

activation of meiosis (ISO)

cellular response to retinoic acid (ISO)

male germ-line stem cell asymmetric division (ISO)

meiotic cell cycle (ISO)

oogenesis (ISO)

positive regulation of transcription by RNA polymerase II (ISO)

regulation of transcription by RNA polymerase II (ISO)

spermatogenesis (ISO)

Cellular Component

cytoplasm (ISO)

male germ cell nucleus (ISO)

nucleus (ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Stra8
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955494	7,408,421 - 7,444,383 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955494	7,408,479 - 7,444,154 (-)	NCBI	ChiLan1.0	ChiLan1.0

STRA8
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	135,231,915 - 135,258,663 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	135,231,979 - 135,258,663 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	134,916,667 - 134,943,415 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	134,567,271 - 134,593,784 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	7	129,654,194 - 129,680,715 (+)	NCBI		Celera
Cytogenetic Map	7	q33	NCBI
HuRef	7	129,219,343 - 129,246,174 (+)	NCBI		HuRef
CHM1_1	7	134,850,630 - 134,877,145 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	136,539,792 - 136,566,564 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	134,261,076 - 134,287,597 (+)	NCBI

Stra8
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	34,897,098 - 34,916,279 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	34,897,098 - 34,916,279 (+)	Ensembl		GRCm39 Ensembl
GRCm38	6	34,920,163 - 34,939,344 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	34,920,163 - 34,939,344 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	34,870,960 - 34,889,342 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	34,851,112 - 34,869,494 (+)	NCBI		MGSCv36	mm8
Celera	6	34,921,213 - 34,939,637 (+)	NCBI		Celera
Cytogenetic Map	6	B1	NCBI
cM Map	6	15.2	NCBI

Stra8
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	64,568,580 - 64,591,914 (+)	NCBI		GRCr8
mRatBN7.2	4	63,601,443 - 63,624,777 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	63,601,604 - 63,624,771 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	4	62,447,724 - 62,474,802 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	62,457,694 - 62,473,360 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	62,176,041 - 62,201,771 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	62,321,565 - 62,336,954 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	4	58,649,924 - 58,676,667 (+)	NCBI		Celera
Cytogenetic Map	4	q22	NCBI

STRA8
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	172,060,380 - 172,085,818 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	24,070,635 - 24,096,073 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	127,205,332 - 127,223,825 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	139,700,812 - 139,726,154 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	139,700,812 - 139,726,154 (+)	Ensembl	panpan1.1		panPan2

STRA8
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	16	12,929,110 - 12,952,468 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	16	12,929,460 - 12,951,439 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	16	13,940,916 - 13,963,812 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	12,908,727 - 12,931,650 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	16	12,908,881 - 12,924,307 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	16	13,351,503 - 13,374,382 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	16	12,450,367 - 12,473,308 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	12,589,219 - 12,612,094 (-)	NCBI		UU_Cfam_GSD_1.0

STRA8
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	14,055,258 - 14,080,399 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	18	14,055,258 - 14,080,399 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	18	14,861,211 - 14,887,457 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

STRA8
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	103,900,418 - 103,932,056 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	103,903,398 - 103,931,380 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666072	826,949 - 845,563 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Stra8
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624765	15,546,548 - 15,574,776 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624765	15,540,563 - 15,574,684 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005405489	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005405490	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005405491	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005405492	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01061552	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01074324	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000002751 ⟹ ENSCLAP00000002695

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955494	7,408,421 - 7,444,383 (-)	Ensembl

RefSeq Acc Id:

ENSCLAT00000002752 ⟹ ENSCLAP00000002696

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955494	7,408,421 - 7,426,478 (-)	Ensembl

RefSeq Acc Id:

ENSCLAT00000002753 ⟹ ENSCLAP00000002697

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955494	7,408,421 - 7,425,856 (-)	Ensembl

RefSeq Acc Id:

XM_005405489 ⟹ XP_005405546

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955494	7,408,479 - 7,425,812 (-)	NCBI

Sequence:

show sequence

CAGGAGGTGACTGCGGACGGGGCTTCGCGGCTCCCCGTGTGTCCCGCGAGCCGAGGCGCGACGT
GCCCAGTGCCTGCTCCCTCGGGTGAAAAGGCTTATTACACTGCAGCCTAGAATGGCAACCGCTG
GGGAAGGCAGCCACCCTGTGAGCACAGTGCCACAGCCACTGATGCAGGTCCAGGAGCTGGAGCC
TCGGGTGGCCCGAAGACGCCTGTCCCAGGCCCGCCACCGAGCCACCATGGCAGGGCTCTTCGAC
AGCCTGAGGAAGACTGTTTTCACCGAGTCTGAGCTCACAGCTTCGAAGTGGCAGGTTCTGAACA
AAGCAAAGAATCATATTCGGGAACTGGAAGAAACCCTGGATAGTTTGCTGAAGCTGAAAGGATC
CTTCAATCTGGAGGATGGGAACCCCTGCAGCTTAGAGGAGGTTAAGGAAGAATATGCTGGAATG
TTCTCCAGAAATGAGAGTTTGATCTCAGAAAGTTTTCTTCAGAATGGCTCCTTCCCCTGGTTCC
CAACTGAGGCAGTCGAGAAGGACTTAGAAGGGGATGAAGGTGAAGAAGAGGAAGAGGAAAACCA
AGAAGAGGCAGAGGCAGAGGCAGAGGCAGAGGAAGAAGAGGAGAAAAAAGTGGATCTCTTACAC
TCCCCCATCACTTCACCGCCAGACCTCCTGGAATTTGAGCGGTACCTCACCTTCTACAAGCAGA
CGATGGACCTCCTGATTGGGAATGGCGTCGTCTCCTCACAGGAGGCCTTGCAGCCTGTCGTCTC
AGCGGCCGTCTCCCACCTGTGGCAGACACTGTCTGAGGACGGGAAGACCAGTGTCCTGCAGATC
TGGGCCCAGTACCATGGTGACCTCCAGAGCCTGGGCACCTGCCCGCAGCTGGCCTATGCTGAGG
ACAGCGTGAAGGACAGCGGTGTGGACAGCCAAGGGGCCAGCTGCTCGCTGGTCTCCACCCCAGA
GGATGTCATTTTGGAAGATGTCTTTGATGTGGCAAGTTTCTTTGACAAAAGTGAATTTCTAAGT
GCATCTAACCTCAGTTCTGGGTTTGCCAGCTTCAACCAAGAGAACTCAGAGAAAAAGTTGCAGC
TCTACCAGCAGATCATGGAGTTTTTAAAGGGCCTCTGCAGCATCAGCTACGTTAACAATCAATT
AAAACAGGAGGAACCAGCCCCTCCTGCTGACGATGAGATGCTAATGCTGAGGTGTCTGGAGACC
TTCGATGATGAGGATTTGTGATGGAGGAGGGCCAGATGGGGAAGAGGCTGAAGGAGGTCTGCAG
TTTGCAAGTTGGGATGTGGACGGCCATGTTTGTGCCTGCCTCGGCCTCCAGGACTCTTCCTAGC
AGGCATTTTGGTGTTTTTAGTTTCTGAAAGTTCTGACTGTTTTTAATTTCTGAAAGTTTAAAAG
AAGCATGGCAAAAACAATAAAAATAAAACAATAAAATAAAAGAA

hide sequence

RefSeq Acc Id:

XM_005405490 ⟹ XP_005405547

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955494	7,408,479 - 7,444,139 (-)	NCBI

Sequence:

show sequence

GAAACAGAAGTCCAGAGGTGAGATTCTTCATCATGGCAGACGGCCTTGATATCACCCGCCAGGA
GCGGAGCCCAGCCTCTCCAAGGTCACAACCCGGCCTCTGCCCAAAAGGGCGCCAGACCGCCAGA
TACTCTTCGTGAGCAGGGTGAAAAGGCTTATTACACTGCAGCCTAGAATGGCAACCGCTGGGGA
AGGCAGCCACCCTGTGAGCACAGTGCCACAGCCACTGATGCAGGTCCAGGAGCTGGAGCCTCGG
GTGGCCCGAAGACGCCTGTCCCAGGCCCGCCACCGAGCCACCATGGCAGGGCTCTTCGACAGCC
TGAGGAAGACTGTTTTCACCGAGTCTGAGCTCACAGCTTCGAAGTGGCAGGTTCTGAACAAAGC
AAAGAATCATATTCGGGAACTGGAAGAAACCCTGGATAGTTTGCTGAAGCTGAAAGGATCCTTC
AATCTGGAGGATGGGAACCCCTGCAGCTTAGAGGAGGTTAAGGAAGAATATGCTGGAATGTTCT
CCAGAAATGAGAGTTTGATCTCAGAAAGTTTTCTTCAGAATGGCTCCTTCCCCTGGTTCCCAAC
TGAGGCAGTCGAGAAGGACTTAGAAGGGGATGAAGGTGAAGAAGAGGAAGAGGAAAACCAAGAA
GAGGCAGAGGCAGAGGCAGAGGCAGAGGAAGAAGAGGAGAAAAAAGTGGATCTCTTACACTCCC
CCATCACTTCACCGCCAGACCTCCTGGAATTTGAGCGGTACCTCACCTTCTACAAGCAGACGAT
GGACCTCCTGATTGGGAATGGCGTCGTCTCCTCACAGGAGGCCTTGCAGCCTGTCGTCTCAGCG
GCCGTCTCCCACCTGTGGCAGACACTGTCTGAGGACGGGAAGACCAGTGTCCTGCAGATCTGGG
CCCAGTACCATGGTGACCTCCAGAGCCTGGGCACCTGCCCGCAGCTGGCCTATGCTGAGGACAG
CGTGAAGGACAGCGGTGTGGACAGCCAAGGGGCCAGCTGCTCGCTGGTCTCCACCCCAGAGGAT
GTCATTTTGGAAGATGTCTTTGATGTGGCAAGTTTCTTTGACAAAAGTGAATTTCTAAGTGCAT
CTAACCTCAGTTCTGGGTTTGCCAGCTTCAACCAAGAGAACTCAGAGAAAAAGTTGCAGCTCTA
CCAGCAGATCATGGAGTTTTTAAAGGGCCTCTGCAGCATCAGCTACGTTAACAATCAATTAAAA
CAGGAGGAACCAGCCCCTCCTGCTGACGATGAGATGCTAATGCTGAGGTGTCTGGAGACCTTCG
ATGATGAGGATTTGTGATGGAGGAGGGCCAGATGGGGAAGAGGCTGAAGGAGGTCTGCAGTTTG
CAAGTTGGGATGTGGACGGCCATGTTTGTGCCTGCCTCGGCCTCCAGGACTCTTCCTAGCAGGC
ATTTTGGTGTTTTTAGTTTCTGAAAGTTCTGACTGTTTTTAATTTCTGAAAGTTTAAAAGAAGC
ATGGCAAAAACAATAAAAATAAAACAATAAAATAAAAGAA

hide sequence

RefSeq Acc Id:

XM_005405491 ⟹ XP_005405548

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955494	7,408,479 - 7,441,750 (-)	NCBI

Sequence:

show sequence

ACTCCCCGCCCCTCATCTAGCCTCCGGACCGCCCACTGCGCTTGACGTCATCTTCCTCGAAAAG
GGGCTACCCGAGGAGGCTGCGCGCGCGGCGGCGGCGGCAGCTTCCTCCGCTGTCACTCAGAGAG
CTTGGGGACGTCTCAGGGTCATGCGGCGGGGGAGTGCCCTGCTTATTGACATTGTTACATGGTG
GGACGCTTCGTCCCCTGTCCTCTTTTTACAAAAGGGGGAAACTGGAGTTCTAGGTGACAAAGTG
AAGTCATCAAATAGCTTCAACTCAAGCACCCCGCTTTCATTAATAAGACTGGTTAGCTGCATGG
CCAGATAAGCAGCATCCTGCTAGCAAGAAAACGCCGAGTTGCAGCATGGGTGAAAAGGCTTATT
ACACTGCAGCCTAGAATGGCAACCGCTGGGGAAGGCAGCCACCCTGTGAGCACAGTGCCACAGC
CACTGATGCAGGTCCAGGAGCTGGAGCCTCGGGTGGCCCGAAGACGCCTGTCCCAGGCCCGCCA
CCGAGCCACCATGGCAGGGCTCTTCGACAGCCTGAGGAAGACTGTTTTCACCGAGTCTGAGCTC
ACAGCTTCGAAGTGGCAGGTTCTGAACAAAGCAAAGAATCATATTCGGGAACTGGAAGAAACCC
TGGATAGTTTGCTGAAGCTGAAAGGATCCTTCAATCTGGAGGATGGGAACCCCTGCAGCTTAGA
GGAGGTTAAGGAAGAATATGCTGGAATGTTCTCCAGAAATGAGAGTTTGATCTCAGAAAGTTTT
CTTCAGAATGGCTCCTTCCCCTGGTTCCCAACTGAGGCAGTCGAGAAGGACTTAGAAGGGGATG
AAGGTGAAGAAGAGGAAGAGGAAAACCAAGAAGAGGCAGAGGCAGAGGCAGAGGCAGAGGAAGA
AGAGGAGAAAAAAGTGGATCTCTTACACTCCCCCATCACTTCACCGCCAGACCTCCTGGAATTT
GAGCGGTACCTCACCTTCTACAAGCAGACGATGGACCTCCTGATTGGGAATGGCGTCGTCTCCT
CACAGGAGGCCTTGCAGCCTGTCGTCTCAGCGGCCGTCTCCCACCTGTGGCAGACACTGTCTGA
GGACGGGAAGACCAGTGTCCTGCAGATCTGGGCCCAGTACCATGGTGACCTCCAGAGCCTGGGC
ACCTGCCCGCAGCTGGCCTATGCTGAGGACAGCGTGAAGGACAGCGGTGTGGACAGCCAAGGGG
CCAGCTGCTCGCTGGTCTCCACCCCAGAGGATGTCATTTTGGAAGATGTCTTTGATGTGGCAAG
TTTCTTTGACAAAAGTGAATTTCTAAGTGCATCTAACCTCAGTTCTGGGTTTGCCAGCTTCAAC
CAAGAGAACTCAGAGAAAAAGTTGCAGCTCTACCAGCAGATCATGGAGTTTTTAAAGGGCCTCT
GCAGCATCAGCTACGTTAACAATCAATTAAAACAGGAGGAACCAGCCCCTCCTGCTGACGATGA
GATGCTAATGCTGAGGTGTCTGGAGACCTTCGATGATGAGGATTTGTGATGGAGGAGGGCCAGA
TGGGGAAGAGGCTGAAGGAGGTCTGCAGTTTGCAAGTTGGGATGTGGACGGCCATGTTTGTGCC
TGCCTCGGCCTCCAGGACTCTTCCTAGCAGGCATTTTGGTGTTTTTAGTTTCTGAAAGTTCTGA
CTGTTTTTAATTTCTGAAAGTTTAAAAGAAGCATGGCAAAAACAATAAAAATAAAACAATAAAA
TAAAAGAA

hide sequence

RefSeq Acc Id:

XM_005405492 ⟹ XP_005405549

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955494	7,408,479 - 7,444,154 (-)	NCBI

Sequence:

show sequence

AGCAAGGAGGAGGAAGAAACAGAAGTCCAGAGGTGAGATTCTTCATCATGGCAGACGGCCTTGA
TATCACCCGCCAGGGTGAAAAGGCTTATTACACTGCAGCCTAGAATGGCAACCGCTGGGGAAGG
CAGCCACCCTGTGAGCACAGTGCCACAGCCACTGATGCAGGTCCAGGAGCTGGAGCCTCGGGTG
GCCCGAAGACGCCTGTCCCAGGCCCGCCACCGAGCCACCATGGCAGGGCTCTTCGACAGCCTGA
GGAAGACTGTTTTCACCGAGTCTGAGCTCACAGCTTCGAAGTGGCAGGTTCTGAACAAAGCAAA
GAATCATATTCGGGAACTGGAAGAAACCCTGGATAGTTTGCTGAAGCTGAAAGGATCCTTCAAT
CTGGAGGATGGGAACCCCTGCAGCTTAGAGGAGGTTAAGGAAGAATATGCTGGAATGTTCTCCA
GAAATGAGAGTTTGATCTCAGAAAGTTTTCTTCAGAATGGCTCCTTCCCCTGGTTCCCAACTGA
GGCAGTCGAGAAGGACTTAGAAGGGGATGAAGGTGAAGAAGAGGAAGAGGAAAACCAAGAAGAG
GCAGAGGCAGAGGCAGAGGCAGAGGAAGAAGAGGAGAAAAAAGTGGATCTCTTACACTCCCCCA
TCACTTCACCGCCAGACCTCCTGGAATTTGAGCGGTACCTCACCTTCTACAAGCAGACGATGGA
CCTCCTGATTGGGAATGGCGTCGTCTCCTCACAGGAGGCCTTGCAGCCTGTCGTCTCAGCGGCC
GTCTCCCACCTGTGGCAGACACTGTCTGAGGACGGGAAGACCAGTGTCCTGCAGATCTGGGCCC
AGTACCATGGTGACCTCCAGAGCCTGGGCACCTGCCCGCAGCTGGCCTATGCTGAGGACAGCGT
GAAGGACAGCGGTGTGGACAGCCAAGGGGCCAGCTGCTCGCTGGTCTCCACCCCAGAGGATGTC
ATTTTGGAAGATGTCTTTGATGTGGCAAGTTTCTTTGACAAAAGTGAATTTCTAAGTGCATCTA
ACCTCAGTTCTGGGTTTGCCAGCTTCAACCAAGAGAACTCAGAGAAAAAGTTGCAGCTCTACCA
GCAGATCATGGAGTTTTTAAAGGGCCTCTGCAGCATCAGCTACGTTAACAATCAATTAAAACAG
GAGGAACCAGCCCCTCCTGCTGACGATGAGATGCTAATGCTGAGGTGTCTGGAGACCTTCGATG
ATGAGGATTTGTGATGGAGGAGGGCCAGATGGGGAAGAGGCTGAAGGAGGTCTGCAGTTTGCAA
GTTGGGATGTGGACGGCCATGTTTGTGCCTGCCTCGGCCTCCAGGACTCTTCCTAGCAGGCATT
TTGGTGTTTTTAGTTTCTGAAAGTTCTGACTGTTTTTAATTTCTGAAAGTTTAAAAGAAGCATG
GCAAAAACAATAAAAATAAAACAATAAAATAAAAGAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005405546	(Get FASTA)	NCBI Sequence Viewer
	XP_005405547	(Get FASTA)	NCBI Sequence Viewer
	XP_005405548	(Get FASTA)	NCBI Sequence Viewer
	XP_005405549	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000002695
	ENSCLAP00000002695.1
	ENSCLAP00000002696
	ENSCLAP00000002696.1
	ENSCLAP00000002697
	ENSCLAP00000002697.1

RefSeq Acc Id:

XP_005405549 ⟸ XM_005405492

- UniProtKB:

A0A8C2YJ84 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MATAGEGSHPVSTVPQPLMQVQELEPRVARRRLSQARHRATMAGLFDSLRKTVFTESELTASKW
QVLNKAKNHIRELEETLDSLLKLKGSFNLEDGNPCSLEEVKEEYAGMFSRNESLISESFLQNGS
FPWFPTEAVEKDLEGDEGEEEEEENQEEAEAEAEAEEEEEKKVDLLHSPITSPPDLLEFERYLT
FYKQTMDLLIGNGVVSSQEALQPVVSAAVSHLWQTLSEDGKTSVLQIWAQYHGDLQSLGTCPQL
AYAEDSVKDSGVDSQGASCSLVSTPEDVILEDVFDVASFFDKSEFLSASNLSSGFASFNQENSE
KKLQLYQQIMEFLKGLCSISYVNNQLKQEEPAPPADDEMLMLRCLETFDDEDL

hide sequence

RefSeq Acc Id:

XP_005405547 ⟸ XM_005405490

- UniProtKB:

A0A8C2YJ84 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MATAGEGSHPVSTVPQPLMQVQELEPRVARRRLSQARHRATMAGLFDSLRKTVFTESELTASKW
QVLNKAKNHIRELEETLDSLLKLKGSFNLEDGNPCSLEEVKEEYAGMFSRNESLISESFLQNGS
FPWFPTEAVEKDLEGDEGEEEEEENQEEAEAEAEAEEEEEKKVDLLHSPITSPPDLLEFERYLT
FYKQTMDLLIGNGVVSSQEALQPVVSAAVSHLWQTLSEDGKTSVLQIWAQYHGDLQSLGTCPQL
AYAEDSVKDSGVDSQGASCSLVSTPEDVILEDVFDVASFFDKSEFLSASNLSSGFASFNQENSE
KKLQLYQQIMEFLKGLCSISYVNNQLKQEEPAPPADDEMLMLRCLETFDDEDL

hide sequence

RefSeq Acc Id:

XP_005405548 ⟸ XM_005405491

- UniProtKB:

A0A8C2YJ84 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MATAGEGSHPVSTVPQPLMQVQELEPRVARRRLSQARHRATMAGLFDSLRKTVFTESELTASKW
QVLNKAKNHIRELEETLDSLLKLKGSFNLEDGNPCSLEEVKEEYAGMFSRNESLISESFLQNGS
FPWFPTEAVEKDLEGDEGEEEEEENQEEAEAEAEAEEEEEKKVDLLHSPITSPPDLLEFERYLT
FYKQTMDLLIGNGVVSSQEALQPVVSAAVSHLWQTLSEDGKTSVLQIWAQYHGDLQSLGTCPQL
AYAEDSVKDSGVDSQGASCSLVSTPEDVILEDVFDVASFFDKSEFLSASNLSSGFASFNQENSE
KKLQLYQQIMEFLKGLCSISYVNNQLKQEEPAPPADDEMLMLRCLETFDDEDL

hide sequence

RefSeq Acc Id:

XP_005405546 ⟸ XM_005405489

- UniProtKB:

A0A8C2YJ84 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MATAGEGSHPVSTVPQPLMQVQELEPRVARRRLSQARHRATMAGLFDSLRKTVFTESELTASKW
QVLNKAKNHIRELEETLDSLLKLKGSFNLEDGNPCSLEEVKEEYAGMFSRNESLISESFLQNGS
FPWFPTEAVEKDLEGDEGEEEEEENQEEAEAEAEAEEEEEKKVDLLHSPITSPPDLLEFERYLT
FYKQTMDLLIGNGVVSSQEALQPVVSAAVSHLWQTLSEDGKTSVLQIWAQYHGDLQSLGTCPQL
AYAEDSVKDSGVDSQGASCSLVSTPEDVILEDVFDVASFFDKSEFLSASNLSSGFASFNQENSE
KKLQLYQQIMEFLKGLCSISYVNNQLKQEEPAPPADDEMLMLRCLETFDDEDL

hide sequence

RefSeq Acc Id:

ENSCLAP00000002697 ⟸ ENSCLAT00000002753

RefSeq Acc Id:

ENSCLAP00000002696 ⟸ ENSCLAT00000002752

RefSeq Acc Id:

ENSCLAP00000002695 ⟸ ENSCLAT00000002751

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000001947	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000002751	ENTREZGENE
	ENSCLAT00000002751.1	UniProtKB/TrEMBL
	ENSCLAT00000002752	ENTREZGENE
	ENSCLAT00000002752.1	UniProtKB/TrEMBL
	ENSCLAT00000002753	ENTREZGENE
	ENSCLAT00000002753.1	UniProtKB/TrEMBL
Gene3D-CATH	4.10.280.10	UniProtKB/TrEMBL
InterPro	HLH_DNA-bd_sf	UniProtKB/TrEMBL
	Stra8	UniProtKB/TrEMBL
NCBI Gene	Stra8	ENTREZGENE
PANTHER	PTHR35254	UniProtKB/TrEMBL
	STIMULATED BY RETINOIC ACID GENE 8 PROTEIN HOMOLOG	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47459	UniProtKB/TrEMBL
UniProt	A0A8C2YJ84	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar