PCAT2 (prostate cancer associated transcript 2) - Rat Genome Database

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Gene: PCAT2 (prostate cancer associated transcript 2) Homo sapiens
Analyze
Symbol: PCAT2
Name: prostate cancer associated transcript 2
RGD ID: 8553113
HGNC Page HGNC
Description:
Type: ncrna
RefSeq Status: VALIDATED
Also known as: CARLo-4; CARLO4; PCA2; prostate cancer associated transcript 2 (non-protein coding); TCONS_00015167
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl8127,072,694 - 127,227,541 (-)EnsemblGRCh38hg38GRCh38
GRCh388127,072,694 - 127,082,221 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh378128,084,939 - 128,094,466 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map8q24.21NCBI
CHM1_18128,125,328 - 128,134,856 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:24594601  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:48
Count of miRNA genes:48
Interacting mature miRNAs:48
Transcripts:ENST00000521815
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium 76 31 31 1 31 1 2 9 23 44 2
Low 265 3 251 252 73 253 80 6 6 65 83 63 4 12 13
Below cutoff 435 149 216 143 561 111 598 118 147 128 292 179 34 346 243

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000500112
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,204,412 - 127,219,238 (-)Ensembl
RefSeq Acc Id: ENST00000521815
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,185,480 - 127,188,210 (-)Ensembl
RefSeq Acc Id: ENST00000523510
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,072,694 - 127,082,221 (-)Ensembl
RefSeq Acc Id: ENST00000641001
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,676 - 127,218,968 (-)Ensembl
RefSeq Acc Id: ENST00000641013
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,161,584 - 127,205,432 (-)Ensembl
RefSeq Acc Id: ENST00000641028
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,222,314 - 127,224,476 (-)Ensembl
RefSeq Acc Id: ENST00000641029
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,708 - 127,218,969 (-)Ensembl
RefSeq Acc Id: ENST00000641056
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,406 - 127,205,522 (-)Ensembl
RefSeq Acc Id: ENST00000641060
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,187,785 - 127,208,668 (-)Ensembl
RefSeq Acc Id: ENST00000641073
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,654 - 127,188,210 (-)Ensembl
RefSeq Acc Id: ENST00000641106
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,185,024 - 127,218,967 (-)Ensembl
RefSeq Acc Id: ENST00000641153
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,185,526 - 127,218,888 (-)Ensembl
RefSeq Acc Id: ENST00000641162
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,185,047 - 127,201,123 (-)Ensembl
RefSeq Acc Id: ENST00000641171
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,184,755 - 127,218,967 (-)Ensembl
RefSeq Acc Id: ENST00000641174
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,161,834 - 127,219,118 (-)Ensembl
RefSeq Acc Id: ENST00000641179
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,422 - 127,218,909 (-)Ensembl
RefSeq Acc Id: ENST00000641187
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,842 - 127,219,233 (-)Ensembl
RefSeq Acc Id: ENST00000641218
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,185,526 - 127,206,123 (-)Ensembl
RefSeq Acc Id: ENST00000641262
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,161,824 - 127,188,120 (-)Ensembl
RefSeq Acc Id: ENST00000641298
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,674 - 127,218,935 (-)Ensembl
RefSeq Acc Id: ENST00000641309
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,185,024 - 127,219,127 (-)Ensembl
RefSeq Acc Id: ENST00000641321
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,359 - 127,223,666 (-)Ensembl
RefSeq Acc Id: ENST00000641357
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,422 - 127,179,838 (-)Ensembl
RefSeq Acc Id: ENST00000641362
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,422 - 127,218,936 (-)Ensembl
RefSeq Acc Id: ENST00000641365
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,422 - 127,218,931 (-)Ensembl
RefSeq Acc Id: ENST00000641392
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,185,024 - 127,189,052 (-)Ensembl
RefSeq Acc Id: ENST00000641411
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,422 - 127,205,395 (-)Ensembl
RefSeq Acc Id: ENST00000641414
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,184,739 - 127,219,123 (-)Ensembl
RefSeq Acc Id: ENST00000641418
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,180,362 - 127,209,635 (-)Ensembl
RefSeq Acc Id: ENST00000641421
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,140,276 - 127,202,132 (-)Ensembl
RefSeq Acc Id: ENST00000641425
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,152,877 - 127,208,202 (-)Ensembl
RefSeq Acc Id: ENST00000641480
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,831 - 127,206,838 (-)Ensembl
RefSeq Acc Id: ENST00000641487
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,359 - 127,224,476 (-)Ensembl
RefSeq Acc Id: ENST00000641488
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,185,526 - 127,205,569 (-)Ensembl
RefSeq Acc Id: ENST00000641496
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,161,579 - 127,219,237 (-)Ensembl
RefSeq Acc Id: ENST00000641510
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,359 - 127,188,394 (-)Ensembl
RefSeq Acc Id: ENST00000641514
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,186,004 - 127,198,147 (-)Ensembl
RefSeq Acc Id: ENST00000641523
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,185,607 - 127,218,968 (-)Ensembl
RefSeq Acc Id: ENST00000641547
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,708 - 127,218,968 (-)Ensembl
RefSeq Acc Id: ENST00000641578
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,359 - 127,197,556 (-)Ensembl
RefSeq Acc Id: ENST00000641582
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,352 - 127,174,844 (-)Ensembl
RefSeq Acc Id: ENST00000641584
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,184,761 - 127,190,842 (-)Ensembl
RefSeq Acc Id: ENST00000641588
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,152,871 - 127,203,227 (-)Ensembl
RefSeq Acc Id: ENST00000641604
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,360 - 127,203,198 (-)Ensembl
RefSeq Acc Id: ENST00000641615
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,193 - 127,203,175 (-)Ensembl
RefSeq Acc Id: ENST00000641625
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,184,755 - 127,205,596 (-)Ensembl
RefSeq Acc Id: ENST00000641642
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,422 - 127,219,220 (-)Ensembl
RefSeq Acc Id: ENST00000641674
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,699 - 127,218,968 (-)Ensembl
RefSeq Acc Id: ENST00000641681
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,179,463 - 127,218,874 (-)Ensembl
RefSeq Acc Id: ENST00000641696
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,818 - 127,208,327 (-)Ensembl
RefSeq Acc Id: ENST00000641701
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,147,275 - 127,203,220 (-)Ensembl
RefSeq Acc Id: ENST00000641704
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,185,024 - 127,218,968 (-)Ensembl
RefSeq Acc Id: ENST00000641706
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,152,877 - 127,203,166 (-)Ensembl
RefSeq Acc Id: ENST00000641719
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,359 - 127,219,260 (-)Ensembl
RefSeq Acc Id: ENST00000641733
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,184,739 - 127,218,991 (-)Ensembl
RefSeq Acc Id: ENST00000641746
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,654 - 127,203,222 (-)Ensembl
RefSeq Acc Id: ENST00000641786
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,185,529 - 127,224,436 (-)Ensembl
RefSeq Acc Id: ENST00000641794
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,078,439 - 127,082,282 (-)Ensembl
RefSeq Acc Id: ENST00000641825
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,223,008 - 127,223,666 (-)Ensembl
RefSeq Acc Id: ENST00000641828
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,699 - 127,218,842 (-)Ensembl
RefSeq Acc Id: ENST00000641853
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,222,322 - 127,227,541 (-)Ensembl
RefSeq Acc Id: ENST00000641867
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,179,481 - 127,219,146 (-)Ensembl
RefSeq Acc Id: ENST00000641880
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,184,755 - 127,218,968 (-)Ensembl
RefSeq Acc Id: ENST00000641912
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,116,660 - 127,218,967 (-)Ensembl
RefSeq Acc Id: ENST00000641919
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,116,662 - 127,144,417 (-)Ensembl
RefSeq Acc Id: ENST00000641934
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,179,177 - 127,218,968 (-)Ensembl
RefSeq Acc Id: ENST00000641944
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,186,807 - 127,202,080 (-)Ensembl
RefSeq Acc Id: ENST00000641953
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,223,247 - 127,227,541 (-)Ensembl
RefSeq Acc Id: ENST00000641964
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,184,750 - 127,205,511 (-)Ensembl
RefSeq Acc Id: ENST00000641965
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,184,761 - 127,189,103 (-)Ensembl
RefSeq Acc Id: ENST00000641968
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,185,590 - 127,191,258 (-)Ensembl
RefSeq Acc Id: ENST00000641991
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,152,871 - 127,218,968 (-)Ensembl
RefSeq Acc Id: ENST00000642010
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,359 - 127,218,995 (-)Ensembl
RefSeq Acc Id: ENST00000642018
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,185,022 - 127,218,852 (-)Ensembl
RefSeq Acc Id: ENST00000642076
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,218,931 - 127,223,666 (-)Ensembl
RefSeq Acc Id: ENST00000642077
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,422 - 127,218,931 (-)Ensembl
RefSeq Acc Id: ENST00000642082
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,185,047 - 127,192,315 (-)Ensembl
RefSeq Acc Id: ENST00000642088
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,152,871 - 127,188,843 (-)Ensembl
RefSeq Acc Id: ENST00000642100
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,078,895 - 127,185,243 (-)Ensembl
RefSeq Acc Id: ENST00000642102
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,138 - 127,202,237 (-)Ensembl
RefSeq Acc Id: ENST00000642118
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,185,017 - 127,205,721 (-)Ensembl
RefSeq Acc Id: ENST00000642126
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,422 - 127,205,467 (-)Ensembl
RefSeq Acc Id: ENST00000642134
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,168,708 - 127,218,870 (-)Ensembl
RefSeq Acc Id: ENST00000642142
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,184,750 - 127,219,395 (-)Ensembl
RefSeq Acc Id: ENST00000657669
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,186,797 - 127,202,080 (-)Ensembl
RefSeq Acc Id: ENST00000663628
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,185,526 - 127,219,237 (-)Ensembl
RefSeq Acc Id: ENST00000664744
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl8127,222,314 - 127,224,477 (-)Ensembl
RefSeq Acc Id: NR_119373
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh388127,072,694 - 127,082,221 (-)NCBI
CHM1_18128,125,328 - 128,134,856 (-)NCBI
Sequence:

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 8q11.1-24.3(chr8:46031340-139285494)x3 copy number gain See cases [RCV000139539] Chr8:46031340..139285494 [GRCh38]
Chr8:46942962..140297737 [GRCh37]
Chr8:47062127..140366919 [NCBI36]
Chr8:8q11.1-24.3
pathogenic
GRCh38/hg38 8q22.3-24.3(chr8:103306336-145068712)x3 copy number gain See cases [RCV000142810] Chr8:103306336..145068712 [GRCh38]
Chr8:104318564..146294098 [GRCh37]
Chr8:104387740..146264902 [NCBI36]
Chr8:8q22.3-24.3
pathogenic|likely pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:226452-145068712)x3 copy number gain See cases [RCV000142858] Chr8:226452..145068712 [GRCh38]
Chr8:176452..146294098 [GRCh37]
Chr8:166452..146264902 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8q24.13-24.3(chr8:124498498-145068712)x3 copy number gain See cases [RCV000137346] Chr8:124498498..145068712 [GRCh38]
Chr8:125510739..146294098 [GRCh37]
Chr8:125579920..146264902 [NCBI36]
Chr8:8q24.13-24.3
pathogenic
GRCh38/hg38 8q22.1-24.3(chr8:97382873-145070385)x3 copy number gain See cases [RCV000140447] Chr8:97382873..145070385 [GRCh38]
Chr8:98395101..146295771 [GRCh37]
Chr8:98464277..146266575 [NCBI36]
Chr8:8q22.1-24.3
pathogenic
GRCh38/hg38 8q21.2-24.3(chr8:85765999-145070385)x3 copy number gain See cases [RCV000143659] Chr8:85765999..145070385 [GRCh38]
Chr8:86778228..146295771 [GRCh37]
Chr8:86863079..146266575 [NCBI36]
Chr8:8q21.2-24.3
pathogenic
GRCh38/hg38 8q22.3-24.3(chr8:100867343-145070385)x3 copy number gain See cases [RCV000141694] Chr8:100867343..145070385 [GRCh38]
Chr8:101879571..146295771 [GRCh37]
Chr8:101948747..146266575 [NCBI36]
Chr8:8q22.3-24.3
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145054634)x3 copy number gain See cases [RCV000148092] Chr8:241530..145054634 [GRCh38]
Chr8:191530..146280020 [GRCh37]
Chr8:181530..146250824 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8q24.13-24.3(chr8:124514090-145054634)x3 copy number gain See cases [RCV000148117] Chr8:124514090..145054634 [GRCh38]
Chr8:125526331..146280020 [GRCh37]
Chr8:125595512..146250824 [NCBI36]
Chr8:8q24.13-24.3
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:208048-145070385)x3 copy number gain See cases [RCV000141808] Chr8:208048..145070385 [GRCh38]
Chr8:158048..146295771 [GRCh37]
Chr8:148048..146266575 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8q21.3-24.3(chr8:87931152-145068712)x3 copy number gain See cases [RCV000138551] Chr8:87931152..145068712 [GRCh38]
Chr8:88943380..146294098 [GRCh37]
Chr8:89012496..146264902 [NCBI36]
Chr8:8q21.3-24.3
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241605-145054781)x3 copy number gain See cases [RCV000138643] Chr8:241605..145054781 [GRCh38]
Chr8:191605..146280167 [GRCh37]
Chr8:181605..146250971 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p21.3-q24.3(chr8:21291522-145070385)x3 copy number gain See cases [RCV000142021] Chr8:21291522..145070385 [GRCh38]
Chr8:21149033..146295771 [GRCh37]
Chr8:21193313..146266575 [NCBI36]
Chr8:8p21.3-q24.3
pathogenic
GRCh38/hg38 8q21.13-24.3(chr8:77480050-145068712)x3 copy number gain See cases [RCV000139036] Chr8:77480050..145068712 [GRCh38]
Chr8:78392286..146294098 [GRCh37]
Chr8:78554841..146264902 [NCBI36]
Chr8:8q21.13-24.3
pathogenic
GRCh38/hg38 8q21.13-24.3(chr8:78614077-145054634)x3 copy number gain See cases [RCV000142597] Chr8:78614077..145054634 [GRCh38]
Chr8:79526312..146280020 [GRCh37]
Chr8:79688867..146250824 [NCBI36]
Chr8:8q21.13-24.3
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145054634)x3 copy number gain See cases [RCV000053602] Chr8:241530..145054634 [GRCh38]
Chr8:191530..146280020 [GRCh37]
Chr8:181530..146250824 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8q22.1-24.3(chr8:95606052-145054775)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053677]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053677]|See cases [RCV000053677] Chr8:95606052..145054775 [GRCh38]
Chr8:96618280..146280161 [GRCh37]
Chr8:96687456..146250965 [NCBI36]
Chr8:8q22.1-24.3
pathogenic
GRCh38/hg38 8q24.13-24.3(chr8:124514090-145054634)x3 copy number gain See cases [RCV000053678] Chr8:124514090..145054634 [GRCh38]
Chr8:125526331..146280020 [GRCh37]
Chr8:125595512..146250824 [NCBI36]
Chr8:8q24.13-24.3
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:244417-145054775)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053604]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053604]|See cases [RCV000053604] Chr8:244417..145054775 [GRCh38]
Chr8:194417..146280161 [GRCh37]
Chr8:184417..146250965 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8q24.21-24.23(chr8:126626164-137169427)x1 copy number loss See cases [RCV000054306] Chr8:126626164..137169427 [GRCh38]
Chr8:127638409..138181670 [GRCh37]
Chr8:127707591..138250852 [NCBI36]
Chr8:8q24.21-24.23
pathogenic
GRCh38/hg38 8q24.13-24.21(chr8:122454392-128513076)x3 copy number gain See cases [RCV000133620] Chr8:122454392..128513076 [GRCh38]
Chr8:123466631..129525322 [GRCh37]
Chr8:123535812..129594504 [NCBI36]
Chr8:8q24.13-24.21
pathogenic
GRCh38/hg38 8q21.3-24.23(chr8:86300584-137022587)x3 copy number gain See cases [RCV000135621] Chr8:86300584..137022587 [GRCh38]
Chr8:87312813..138034830 [GRCh37]
Chr8:87381929..138104012 [NCBI36]
Chr8:8q21.3-24.23
pathogenic|likely pathogenic
GRCh38/hg38 8q22.1-24.3(chr8:94682154-145068656)x3 copy number gain See cases [RCV000134353] Chr8:94682154..145068656 [GRCh38]
Chr8:95694382..146294042 [GRCh37]
Chr8:95763558..146264846 [NCBI36]
Chr8:8q22.1-24.3
pathogenic
GRCh38/hg38 8q23.3-24.3(chr8:113580402-145054634)x3 copy number gain See cases [RCV000050638] Chr8:113580402..145054634 [GRCh38]
Chr8:114592631..146280020 [GRCh37]
Chr8:114661807..146250824 [NCBI36]
Chr8:8q23.3-24.3
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145049449)x3 copy number gain See cases [RCV000051206] Chr8:241530..145049449 [GRCh38]
Chr8:191530..146274835 [GRCh37]
Chr8:181530..146245639 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic

Additional Information

Database Acc Id Source(s)
COSMIC PCAT2 COSMIC
Ensembl Genes ENSG00000254166 Ensembl, ENTREZGENE
Ensembl Transcript ENST00000523510 ENTREZGENE
GTEx ENSG00000254166 GTEx
HGNC ID HGNC:45089 ENTREZGENE
Human Proteome Map PCAT2 Human Proteome Map
NCBI Gene PCAT2 ENTREZGENE
OMIM 617678 OMIM
RNAcentral URS000018F875 RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-22 PCAT2  prostate cancer associated transcript 2    prostate cancer associated transcript 2 (non-protein coding)  Symbol and/or name change 5135510 APPROVED