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References
Genomics
miRNA Target Status
Predicted Targets
Summary Value | Count of predictions: | 61200 | Count of gene targets: | 20089 | Count of transcripts: | 48021 | Interacting mature miRNAs: | hsa-miR-6720-3p, hsa-miR-6720-5p | Prediction methods: | Microtar, Miranda, Pita, Rnahybrid, Targetscan | Result types: | miRGate_prediction | |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
Expression
RNA-SEQ Expression
High: > 1000 TPM value
Medium: Between 11 and 1000 TPMLow: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM
alimentary part of gastrointestinal system | endocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | |
High | ||||||||||
Medium | 1 | 1 | 2 | 1 | ||||||
Low | 7 | 4 | 3 | 22 | 30 | 16 | 13 | 17 | 26 | |
Below cutoff | 2 | 1 | 2 | 1 | 2 | 5 | 6 | 2 | 3 | 7 |
Sequence
Nucleotide Sequences
Reference Sequences
RefSeq Acc Id: | ENST00000611664 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NR_106778 | ||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||
Type: | NON-CODING | ||||||||||||||||
Position: |
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Sequence: |
Clinical Variants
Name | Type | Condition(s) | Position(s) | Clinical significance |
GRCh38/hg38 6p25.3-24.1(chr6:164360-13339881)x3 | copy number gain | See cases [RCV000134022] | Chr6:164360..13339881 [GRCh38] Chr6:164360..13340113 [GRCh37] Chr6:109360..13448092 [NCBI36] Chr6:6p25.3-24.1 |
pathogenic |
GRCh38/hg38 6p25.3(chr6:163083-2029531)x3 | copy number gain | See cases [RCV000135617] | Chr6:163083..2029531 [GRCh38] Chr6:163083..2029765 [GRCh37] Chr6:108083..1974764 [NCBI36] Chr6:6p25.3 |
pathogenic|uncertain significance |
GRCh38/hg38 6p25.3-24.3(chr6:163083-9525496)x3 | copy number gain | See cases [RCV000136567] | Chr6:163083..9525496 [GRCh38] Chr6:163083..9525729 [GRCh37] Chr6:108083..9633715 [NCBI36] Chr6:6p25.3-24.3 |
pathogenic |
GRCh38/hg38 6p25.3-25.1(chr6:152634-5315679)x1 | copy number loss | See cases [RCV000137496] | Chr6:152634..5315679 [GRCh38] Chr6:152634..5315912 [GRCh37] Chr6:97634..5260911 [NCBI36] Chr6:6p25.3-25.1 |
pathogenic |
GRCh38/hg38 6p25.3-25.2(chr6:163083-3459607)x1 | copy number loss | See cases [RCV000138184] | Chr6:163083..3459607 [GRCh38] Chr6:163083..3459841 [GRCh37] Chr6:108083..3404840 [NCBI36] Chr6:6p25.3-25.2 |
pathogenic |
GRCh38/hg38 6p25.3-22.3(chr6:152634-15732163)x3 | copy number gain | See cases [RCV000138121] | Chr6:152634..15732163 [GRCh38] Chr6:152634..15732394 [GRCh37] Chr6:97634..15840373 [NCBI36] Chr6:6p25.3-22.3 |
likely benign |
GRCh38/hg38 6p25.3-25.1(chr6:152634-6027547)x3 | copy number gain | See cases [RCV000138716] | Chr6:152634..6027547 [GRCh38] Chr6:152634..6027780 [GRCh37] Chr6:97634..5972779 [NCBI36] Chr6:6p25.3-25.1 |
likely pathogenic |
GRCh38/hg38 6p25.3-25.1(chr6:152634-6027547)x1 | copy number loss | See cases [RCV000138717] | Chr6:152634..6027547 [GRCh38] Chr6:152634..6027780 [GRCh37] Chr6:97634..5972779 [NCBI36] Chr6:6p25.3-25.1 |
pathogenic |
GRCh38/hg38 6p25.3-22.3(chr6:155807-17058414)x3 | copy number gain | See cases [RCV000140307] | Chr6:155807..17058414 [GRCh38] Chr6:155807..17058645 [GRCh37] Chr6:100807..17166624 [NCBI36] Chr6:6p25.3-22.3 |
pathogenic |
GRCh38/hg38 6p25.3(chr6:170426-1621983)x1 | copy number loss | See cases [RCV000140309] | Chr6:170426..1621983 [GRCh38] Chr6:170426..1622218 [GRCh37] Chr6:115426..1567217 [NCBI36] Chr6:6p25.3 |
pathogenic |
GRCh38/hg38 6p25.3-24.2(chr6:156974-11550817)x3 | copy number gain | See cases [RCV000142295] | Chr6:156974..11550817 [GRCh38] Chr6:156974..11551050 [GRCh37] Chr6:101974..11659036 [NCBI36] Chr6:6p25.3-24.2 |
likely pathogenic |
GRCh38/hg38 6p25.3-24.3(chr6:156974-7122759)x1 | copy number loss | See cases [RCV000142299] | Chr6:156974..7122759 [GRCh38] Chr6:156974..7122992 [GRCh37] Chr6:101974..7067991 [NCBI36] Chr6:6p25.3-24.3 |
pathogenic |
GRCh38/hg38 6p25.3-25.1(chr6:156974-4907692)x1 | copy number loss | See cases [RCV000142304] | Chr6:156974..4907692 [GRCh38] Chr6:156974..4907926 [GRCh37] Chr6:101974..4852925 [NCBI36] Chr6:6p25.3-25.1 |
pathogenic |
GRCh38/hg38 6p25.3-25.1(chr6:152634-6289804)x1 | copy number loss | See cases [RCV000142916] | Chr6:152634..6289804 [GRCh38] Chr6:152634..6290037 [GRCh37] Chr6:97634..6235036 [NCBI36] Chr6:6p25.3-25.1 |
pathogenic |
GRCh38/hg38 6p25.3(chr6:1365202-1627578)x3 | copy number gain | See cases [RCV000143061] | Chr6:1365202..1627578 [GRCh38] Chr6:1365437..1627813 [GRCh37] Chr6:1310436..1572812 [NCBI36] Chr6:6p25.3 |
uncertain significance |
GRCh38/hg38 6p25.3-25.1(chr6:156974-4946857)x3 | copy number gain | See cases [RCV000143375] | Chr6:156974..4946857 [GRCh38] Chr6:156974..4947091 [GRCh37] Chr6:101974..4892090 [NCBI36] Chr6:6p25.3-25.1 |
uncertain significance |
GRCh38/hg38 6p25.3-23(chr6:152634-14417003)x3 | copy number gain | See cases [RCV000143334] | Chr6:152634..14417003 [GRCh38] Chr6:152634..14417234 [GRCh37] Chr6:97634..14525213 [NCBI36] Chr6:6p25.3-23 |
pathogenic |
GRCh38/hg38 6p25.3-24.1(chr6:156974-13081201)x3 | copy number gain | See cases [RCV000143698] | Chr6:156974..13081201 [GRCh38] Chr6:156974..13081433 [GRCh37] Chr6:101974..13189419 [NCBI36] Chr6:6p25.3-24.1 |
likely pathogenic |
GRCh38/hg38 6p25.3-23(chr6:156974-13855925)x1 | copy number loss | See cases [RCV000143782] | Chr6:156974..13855925 [GRCh38] Chr6:156974..13856156 [GRCh37] Chr6:101974..13964135 [NCBI36] Chr6:6p25.3-23 |
pathogenic |
GRCh38/hg38 6p25.3-12.3(chr6:156974-46789291)x3 | copy number gain | See cases [RCV000143497] | Chr6:156974..46789291 [GRCh38] Chr6:156974..46757028 [GRCh37] Chr6:101974..46864987 [NCBI36] Chr6:6p25.3-12.3 |
pathogenic |
GRCh38/hg38 6p25.3(chr6:163083-1951351)x3 | copy number gain | See cases [RCV000050603] | Chr6:163083..1951351 [GRCh38] Chr6:163083..1951585 [GRCh37] Chr6:108083..1896584 [NCBI36] Chr6:6p25.3 |
pathogenic |
GRCh38/hg38 6p25.3-25.1(chr6:163083-6062800)x1 | copy number loss | See cases [RCV000050686] | Chr6:163083..6062800 [GRCh38] Chr6:163083..6063033 [GRCh37] Chr6:108083..6008032 [NCBI36] Chr6:6p25.3-25.1 |
pathogenic |
GRCh38/hg38 6p25.3(chr6:1093293-2155578)x1 | copy number loss | Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052246]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052246]|See cases [RCV000052246] | Chr6:1093293..2155578 [GRCh38] Chr6:1093528..2155812 [GRCh37] Chr6:1038528..2100811 [NCBI36] Chr6:6p25.3 |
pathogenic |
GRCh38/hg38 6p25.3-22.3(chr6:106431-18360595)x3 | copy number gain | See cases [RCV000051869] | Chr6:106431..18360595 [GRCh38] Chr6:106431..18360826 [GRCh37] Chr6:51431..18468805 [NCBI36] Chr6:6p25.3-22.3 |
pathogenic |
GRCh38/hg38 6p25.3-25.1(chr6:144957-5239181)x3 | copy number gain | See cases [RCV000051870] | Chr6:144957..5239181 [GRCh38] Chr6:144957..5239414 [GRCh37] Chr6:89957..5184413 [NCBI36] Chr6:6p25.3-25.1 |
pathogenic |
GRCh38/hg38 6p25.3-23(chr6:389423-13474956)x3 | copy number gain | See cases [RCV000051896] | Chr6:389423..13474956 [GRCh38] Chr6:389423..13475188 [GRCh37] Chr6:334423..13583167 [NCBI36] Chr6:6p25.3-23 |
pathogenic |
GRCh38/hg38 6p25.3-25.1(chr6:107682-4978781)x1 | copy number loss | See cases [RCV000052159] | Chr6:107682..4978781 [GRCh38] Chr6:107682..4979015 [GRCh37] Chr6:52682..4924014 [NCBI36] Chr6:6p25.3-25.1 |
pathogenic |
GRCh38/hg38 6p25.3-25.1(chr6:162883-5979198)x1 | copy number loss | Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052160]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052160]|See cases [RCV000052160] | Chr6:162883..5979198 [GRCh38] Chr6:162883..5979431 [GRCh37] Chr6:107883..5924430 [NCBI36] Chr6:6p25.3-25.1 |
pathogenic |
GRCh38/hg38 6p25.3-25.1(chr6:163083-5875402)x1 | copy number loss | See cases [RCV000052161] | Chr6:163083..5875402 [GRCh38] Chr6:163083..5875635 [GRCh37] Chr6:108083..5820634 [NCBI36] Chr6:6p25.3-25.1 |
pathogenic |
GRCh38/hg38 6p25.3-25.2(chr6:163083-2724611)x1 | copy number loss | See cases [RCV000052162] | Chr6:163083..2724611 [GRCh38] Chr6:163083..2724845 [GRCh37] Chr6:108083..2669844 [NCBI36] Chr6:6p25.3-25.2 |
pathogenic |
GRCh38/hg38 6p25.3-25.1(chr6:164633-6284237)x1 | copy number loss | See cases [RCV000052163] | Chr6:164633..6284237 [GRCh38] Chr6:164633..6284470 [GRCh37] Chr6:109633..6229469 [NCBI36] Chr6:6p25.3-25.1 |
pathogenic |
GRCh38/hg38 6p25.3-25.1(chr6:164633-5823601)x1 | copy number loss | See cases [RCV000052164] | Chr6:164633..5823601 [GRCh38] Chr6:164633..5823834 [GRCh37] Chr6:109633..5768833 [NCBI36] Chr6:6p25.3-25.1 |
pathogenic |
GRCh38/hg38 6p25.3-24.3(chr6:165675-9036034)x1 | copy number loss | See cases [RCV000052165] | Chr6:165675..9036034 [GRCh38] Chr6:165675..9036267 [GRCh37] Chr6:110675..8981266 [NCBI36] Chr6:6p25.3-24.3 |
pathogenic |
Additional Information
External Database Links
Database | Acc Id | Source(s) |
COSMIC | MIR6720 | COSMIC |
Ensembl Genes | ENSG00000275859 | Ensembl, ENTREZGENE |
Ensembl Transcript | ENST00000611664 | ENTREZGENE |
GTEx | ENSG00000275859 | GTEx |
HGNC ID | HGNC:50032 | ENTREZGENE |
Human Proteome Map | MIR6720 | Human Proteome Map |
miRBase | MI0022555 | ENTREZGENE |
NCBI Gene | MIR6720 | ENTREZGENE |
RNAcentral | URS000075D814 | RNACentral |
URS000075E43D | RNACentral | |
URS000075ED75 | RNACentral |