DYNLL1P7 (dynein light chain LC8-type 1 pseudogene 7) - Rat Genome Database

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Gene: DYNLL1P7 (dynein light chain LC8-type 1 pseudogene 7) Homo sapiens
Analyze
Symbol: DYNLL1P7
Name: dynein light chain LC8-type 1 pseudogene 7
RGD ID: 8157926
HGNC Page HGNC:49658
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: DYNLL1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38785,381,105 - 85,381,471 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl785,381,118 - 85,381,375 (-)EnsemblGRCh38hg38GRCh38
GRCh37785,010,421 - 85,010,787 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36784,848,357 - 84,848,723 (-)NCBINCBI36Build 36hg18NCBI36
Celera779,714,454 - 79,714,820 (-)NCBICelera
Cytogenetic Map7q21.11NCBI
HuRef779,620,086 - 79,620,452 (-)NCBIHuRef
CHM1_1784,940,561 - 84,940,927 (-)NCBICHM1_1
T2T-CHM13v2.0786,630,991 - 86,631,357 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2784,342,228 - 84,342,594 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:9847074   PMID:12690205  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:135
Count of miRNA genes:130
Interacting mature miRNAs:130
Transcripts:ENST00000429273
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 5 16 11 2 6 2 46 1 32 3 27 9 10 31
Below cutoff 214 257 132 21 85 10 448 154 582 27 138 124 11 104 294

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000429273
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl785,381,118 - 85,381,375 (-)Ensembl
Protein Sequences
GenBank Protein EAL24183 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences


Additional Information

Database Acc Id Source(s)
COSMIC DYNLL1P7 COSMIC
Ensembl Genes ENSG00000230614 Ensembl
GTEx ENSG00000230614 GTEx
HGNC ID HGNC:49658 ENTREZGENE
Human Proteome Map DYNLL1P7 Human Proteome Map
NCBI Gene DYNLL1P7 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-07 DYNLL1P7  dynein light chain LC8-type 1 pseudogene 7    dynein, light chain, LC8-type 1 pseudogene 7  Symbol and/or name change 5135510 APPROVED