Gene: LOC102555284 (uncharacterized LOC102555284) Rattus norvegicus |
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Analyze |
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Symbol: |
LOC102555284 |
Name: |
uncharacterized LOC102555284 |
RGD ID: |
7744091 |
Description: |
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Type: |
ncrna
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RefSeq Status: |
MODEL |
Previously known as: |
LOC108348499; uncharacterized LOC108348499 |
Latest Assembly: |
mRatBN7.2 - mRatBN7.2 Assembly |
Position: |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 17 | 7,736,565 - 7,802,314 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 17 | 7,731,249 - 7,796,392 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | Rnor_6.0 | 17 | 8,201,571 - 8,228,176 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_5.0 | 17 | 10,345,264 - 10,407,670 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | Celera | 17 | 7,864,747 - 7,891,517 (-) | NCBI | | Celera | | | Cytogenetic Map | 17 | p14 | NCBI | | | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Genomics
QTLs in Region (mRatBN7.2)
9590316 | Scort21 | Serum corticosterone level QTL 21 | 4.75 | 0.001 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 17 | 1 | 22871563 | Rat | 10401807 | Kidm52 | Kidney mass QTL 52 | | | kidney mass (VT:0002707) | both kidneys wet weight (CMO:0000085) | 17 | 1 | 31701463 | Rat | 70184 | BpQTLcluster14 | Blood pressure QTL cluster 14 | 3.38 | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 17 | 1 | 31990913 | Rat | 631207 | Niddm41 | Non-insulin dependent diabetes mellitus QTL 41 | | | blood glucose amount (VT:0000188) | plasma glucose level (CMO:0000042) | 17 | 1 | 37830672 | Rat | 1354658 | Spl8 | Serum phospholipid level QTL 8 | 3.8 | | blood VLDL phospholipid amount (VT:0010507) | blood very low density lipoprotein phospholipid level (CMO:0001571) | 17 | 1 | 60781592 | Rat | 1354581 | Bp247 | Blood pressure QTL 247 | 4.5 | | arterial blood pressure trait (VT:2000000) | pulse pressure (CMO:0000292) | 17 | 1 | 69599340 | Rat | 1354662 | Rf49 | Renal function QTL 49 | 2.9 | | blood creatinine amount (VT:0005328) | plasma creatinine level (CMO:0000537) | 17 | 1 | 69599340 | Rat | 1641902 | Colcr7 | Colorectal carcinoma resistance QTL 7 | 3.35 | 0.0044 | intestine integrity trait (VT:0010554) | benign colorectal tumor surface area measurement (CMO:0001799) | 17 | 2115149 | 21881669 | Rat | 1300123 | Bp194 | Blood pressure QTL 194 | 2.82 | | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 17 | 2115149 | 34551001 | Rat | 631499 | Stl1 | Serum triglyceride level QTL 1 | 3.6 | | blood triglyceride amount (VT:0002644) | blood triglyceride level (CMO:0000118) | 17 | 3271398 | 27389946 | Rat | 2324619 | Coatc4 | Coat color QTL 4 | | 0.001 | coat/hair pigmentation trait (VT:0010463) | pigmented coat/hair area to total coat/hair area ratio (CMO:0001810) | 17 | 4299130 | 21293263 | Rat | 2324619 | Coatc4 | Coat color QTL 4 | | 0.001 | coat/hair pigmentation trait (VT:0010463) | pigmented dorsal coat/hair area to total dorsal coat/hair area ratio (CMO:0001811) | 17 | 4299130 | 21293263 | Rat | 1354613 | Kidm14 | Kidney mass QTL 14 | 6.2 | | kidney mass (VT:0002707) | left kidney wet weight (CMO:0000083) | 17 | 4299130 | 35837242 | Rat | 1354596 | Bw32 | Body weight QTL 32 | 4.5 | | body mass (VT:0001259) | body weight (CMO:0000012) | 17 | 4299130 | 60781592 | Rat | 1354630 | Cm34 | Cardiac mass QTL 34 | 8.7 | | heart left ventricle mass (VT:0007031) | heart left ventricle wet weight (CMO:0000071) | 17 | 4299130 | 69599340 | Rat | 1354638 | Insul1 | Insulin level QTL 1 | 4.8 | | blood insulin amount (VT:0001560) | plasma insulin level (CMO:0000342) | 17 | 4299130 | 69599340 | Rat | 1354651 | Lmblg2 | Limb length QTL 2 | 6 | | tibia length (VT:0004357) | tibia length (CMO:0000450) | 17 | 4299130 | 69599340 | Rat | 2293648 | Bmd31 | Bone mineral density QTL 31 | 4.5 | 0.0001 | femur size trait (VT:1000369) | femoral neck cortical cross-sectional area (CMO:0001702) | 17 | 4354487 | 27028127 | Rat | 2293664 | Bmd28 | Bone mineral density QTL 28 | 5.1 | 0.0001 | femur mineral mass (VT:0010011) | trabecular volumetric bone mineral density (CMO:0001729) | 17 | 4354487 | 27028127 | Rat | 2303627 | Vencon8 | Ventilatory control QTL 8 | | 0.001 | respiration trait (VT:0001943) | tidal volume (CMO:0000222) | 17 | 4528038 | 49528038 | Rat | 10054088 | Scort28 | Serum corticosterone level QTL 28 | 2.04 | 0.0102 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 17 | 4528038 | 49528038 | Rat | |
Expression
Sequence
RefSeq Acc Id: |
XR_001841760 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 17 | 7,744,284 - 7,802,306 (-) | NCBI | mRatBN7.2 | 17 | 7,738,975 - 7,796,391 (-) | NCBI | Rnor_6.0 | 17 | 8,201,571 - 8,228,176 (-) | NCBI |
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Sequence: |
CGTACAGCTGGGCCTCACTGGCCTTGAGGAAAGCCATGAACCTCGCGGTGAAGGAGGCCACGAA GACGGACAACATGCCGAAATCCAGTCTGTTTAAAGGACTTCTCACTGCCCTTGCTCGTTTCTCT CTAAACAAAGCACCTGTCTCGTGCATACTCTGTCAGACTTCGGACAGTCATTCAGTGCACCGTA AGTTACTTCACAGAGTCCTGGAGGTAAATGTCACCTGGGAGCCTCAGTATCAGCCTGACTGTCA ACCACAGGGACTTCTCTAAGGTCCTAGGGTTCACCTACACAGTAAGGAGATGTGGCTATGCATG CTGTACTGAGCTGAAAAGAGACTCAGCTGGAGAAGAATTTTATGAACTCAGTGCTCGTGTGGGG AGAATCCTTTTATACAGATATCCATCAAAGACCCTACTTTAATAATGTCTTATGTGACTGGGAG AGATTTTCCTCTTCTTCATCAGCATCACAAAGGTCTGTTCTGGAAACAGAGAAGACAGACAGGG CAACAGCCAGCAGGTTCTGTTCTCCGTGTGGAGCCAACGTGACTTAGAATTGCTCTGCAGTGCC GCCTCCTATTGGACCACGTACAGCACTGGGCTCCTTGGCAGCAATGTTCTTCCCTTCCTGTCTG GAAAGTTTTTTGGTCACACTCTTGAGTCATGGAAGTGAAAGAGTTGGAAAGGCCTACTGTTCAC TGCTTCTGCTTGTTTGCTTGCTAATTCAGTCAACAAACCTTTTTCCAGAGACTCCTCTCACTGG GCATTGTACTCAACACTGGAAACAAAGAAAGAGTCCTGGGCTTGAAGTAGGACTGCACAGACAT CAACAGTGTGGCCAGCCAGTAGAGTGTGGTTCAGCGGTGGGTGGCAGTGGGATATTCACCAGTT CCTGAGCGGGCTGCCGGTGACGCTGGAAAGGGTGAGTTATTTCAGACCGTGGATCATCATGGGT GCTCCTAATGCCATTTCTCACCCCCTCCTCTCTCTCTGCCTCTGTCTTTCTCCGACCTAGTTAG TTAGTACCTTACGCTTCACATGCCCTGGAATCCCACTAGAATCTAGTTGCTTCCCCCCATCCAC ACGTTCCCTTACAGAATGCTGTCTGCACCAGTGCTGTCTGCATCAGTGCTGTGGTTGACTTCAG ATTCCAGGGAGGACCACCCTGACTCAAAGTCTGTAGATGTGCAATCCTGAGCAACTTGCTCTGG GCTTCGTGATCTGAGTGGTGAAAATGCCCCAGAGTGCTCAGCATGACCTATAGCTCAGGGTCGA AGGTGGGCATGGCTTTAATGCTGTTCCTGAGCTCACTGCGGCATCTCTGTGGTCCTCCTCAGCA CTATTTAGATAGTTCTTCTACCTCTTCGCTTTTAGCTTCTGCCAGGGAGGATGCTTGCTGAGTA AGTTTGGCACAGAGCATGGGCATCGGGCAACATGAAATCTGAACGGCACCAGACTCTCTCTTGA GGCTCTACTGTAGACAGCATGTTACACACAGTTCTCACAGAAACCCTCCAAACTGGAGACATGT AAATG
hide sequence
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RefSeq Acc Id: |
XR_001841761 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 17 | 7,744,284 - 7,802,308 (-) | NCBI | mRatBN7.2 | 17 | 7,738,975 - 7,796,391 (-) | NCBI | Rnor_6.0 | 17 | 8,201,571 - 8,228,176 (-) | NCBI |
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Sequence: |
CGTACAGCTGGGCCTCACTGGCCTTGAGGAAAGCCATGAACCTCGCGGTGAAGGAGGCCACGAA GACGGACAACATGCCGAAATCCAGTCTGTTTAAAGGACTTCTCACTGCCCTTGCTCGTTTCTCT CTAAACAAAGCACCTGTCTCGTGCATACTCTGTCAGACTTCGGACAGTCATTCAGTGCACCGAG TCCTGGAGGTAAATGTCACCTGGGAGCCTCAGTATCAGCCTGACTGTCAACCACAGGGACTTCT CTAAGGTCCTAGGGTTCACCTACACAGTAAGGAGATGTGGCTATGCATGCTGTACTGAGCTGAA AAGAGACTCAGCTGGAGAAGAATTTTATGAACTCAGTGCTCGTGTGGGGAGAATCCTTTTATAC AGATATCCATCAAAGACCCTACTTTAATAATGTCTTATGTGACTGGGAGAGATTTTCCTCTTCT TCATCAGCATCACAAAGGTCTGTTCTGGAAACAGAGAAGACAGACAGGGCAACAGCCAGCAGGT TCTGTTCTCCGTGTGGAGCCAACGTGACTTAGAATTGCTCTGCAGTGCCGCCTCCTATTGGACC ACGTACAGCACTGGGCTCCTTGGCAGCAATGTTCTTCCCTTCCTGTCTGGAAAGTTTTTTGGTC ACACTCTTGAGTCATGGAAGTGAAAGAGTTGGAAAGGCCTACTGTTCACTGCTTCTGCTTGTTT GCTTGCTAATTCAGTCAACAAACCTTTTTCCAGAGACTCCTCTCACTGGGCATTGTACTCAACA CTGGAAACAAAGAAAGAGTCCTGGGCTTGAAGTAGGACTGCACAGACATCAACAGTGTGGCCAG CCAGTAGAGTGTGGTTCAGCGGTGGGTGGCAGTGGGATATTCACCAGTTCCTGAGCGGGCTGCC GGTGACGCTGGAAAGGGTGAGTTATTTCAGACCGTGGATCATCATGGGTGCTCCTAATGCCATT TCTCACCCCCTCCTCTCTCTCTGCCTCTGTCTTTCTCCGACCTAGTTAGTTAGTACCTTACGCT TCACATGCCCTGGAATCCCACTAGAATCTAGTTGCTTCCCCCCATCCACACGTTCCCTTACAGA ATGCTGTCTGCACCAGTGCTGTCTGCATCAGTGCTGTGGTTGACTTCAGATTCCAGGGAGGACC ACCCTGACTCAAAGTCTGTAGATGTGCAATCCTGAGCAACTTGCTCTGGGCTTCGTGATCTGAG TGGTGAAAATGCCCCAGAGTGCTCAGCATGACCTATAGCTCAGGGTCGAAGGTGGGCATGGCTT TAATGCTGTTCCTGAGCTCACTGCGGCATCTCTGTGGTCCTCCTCAGCACTATTTAGATAGTTC TTCTACCTCTTCGCTTTTAGCTTCTGCCAGGGAGGATGCTTGCTGAGTAAGTTTGGCACAGAGC ATGGGCATCGGGCAACATGAAATCTGAACGGCACCAGACTCTCTCTTGAGGCTCTACTGTAGAC AGCATGTTACACACAGTTCTCACAGAAACCCTCCAAACTGGAGACATGTAAATG
hide sequence
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RefSeq Acc Id: |
XR_005495719 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 17 | 7,736,565 - 7,802,314 (-) | NCBI | mRatBN7.2 | 17 | 7,731,249 - 7,796,392 (-) | NCBI |
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RefSeq Acc Id: |
XR_005495720 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 17 | 7,744,284 - 7,801,866 (-) | NCBI | mRatBN7.2 | 17 | 7,738,975 - 7,796,388 (-) | NCBI |
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RefSeq Acc Id: |
XR_005495721 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 17 | 7,744,284 - 7,802,299 (-) | NCBI | mRatBN7.2 | 17 | 7,738,975 - 7,796,391 (-) | NCBI |
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RefSeq Acc Id: |
XR_005495722 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 17 | 7,755,208 - 7,802,278 (-) | NCBI | mRatBN7.2 | 17 | 7,749,897 - 7,796,389 (-) | NCBI |
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RefSeq Acc Id: |
XR_005495724 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 17 | 7,755,208 - 7,802,286 (-) | NCBI | mRatBN7.2 | 17 | 7,749,897 - 7,796,390 (-) | NCBI |
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Additional Information
Nomenclature History
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2021-03-09 |
LOC102555284 |
uncharacterized LOC102555284 |
LOC108348499 |
uncharacterized LOC108348499 |
Data merged from RGD:11401173 |
737654 |
PROVISIONAL |
2016-08-02 |
LOC108348499 |
uncharacterized LOC108348499 |
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Symbol and Name status set to provisional |
70820 |
PROVISIONAL |
2013-12-18 |
LOC102555284 |
uncharacterized LOC102555284 |
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Symbol and Name status set to provisional |
70820 |
PROVISIONAL |
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