LOC102547275 (60S ribosomal protein L21-like) - Rat Genome Database

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Gene: LOC102547275 (60S ribosomal protein L21-like) Rattus norvegicus
Analyze
Symbol: LOC102547275
Name: 60S ribosomal protein L21-like
RGD ID: 7722198
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: large ribosomal subunit protein eL21-like
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X146,706,145 - 146,706,453 (-)NCBIGRCr8
mRatBN7.2X141,669,916 - 141,670,224 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X146,403,176 - 146,403,484 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X146,422,296 - 146,422,795 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
CeleraX137,650,176 - 137,650,484 (-)NCBICelera
Cytogenetic MapXq36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Variants

.
Variants in LOC102547275
1 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
738025Stresp3Stress response QTL 34.610.0066stress-related behavior trait (VT:0010451)defensive burying - approachX100567703150256146Rat
1598809Memor15Memory QTL 154.4exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X103312877148312877Rat
1598856Memor1Memory QTL 11.9exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)X103312877148312877Rat
10059603Bw174Body weight QTL 1743.40.025body mass (VT:0001259)body weight (CMO:0000012)X113937816152453651Rat
634346Insul4Insulin level QTL 40blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)X126975089152453651Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_008773584   ⟹   XP_008771806
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X146,706,145 - 146,706,453 (-)NCBI
mRatBN7.2X141,669,916 - 141,670,224 (-)NCBI
Rnor_6.0X146,403,176 - 146,403,484 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008771806 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_008771806   ⟸   XM_008773584
- Sequence:


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-846 BioCyc
NCBI Gene LOC102547275 ENTREZGENE
PhenoGen LOC102547275 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-12-18 LOC102547275  60S ribosomal protein L21-like      Symbol and Name status set to provisional 70820 PROVISIONAL