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Gene: Vcpkmt (valosin containing protein lysine methyltransferase) Rattus norvegicus
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Symbol: Vcpkmt
Name: valosin containing protein lysine methyltransferase
Description: Predicted to have ATPase binding activity and protein-lysine N-methyltransferase activity. Predicted to be involved in negative regulation of ATPase activity and peptidyl-lysine trimethylation. Predicted to localize to the cytosol and protein-containing complex. Orthologous to human VCPKMT (valosin containing protein lysine methyltransferase); INTERACTS WITH flutamide; indole-3-methanol; (-)-epigallocatechin 3-gallate (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC102548559; LOC362748; methyltransferase like 21D; methyltransferase-like protein 21D; Mettl21d; protein-lysine methyltransferase METTL21D; protein-lysine methyltransferase METTL21D-like; RGD1306228; similar to chromosome 14 open reading frame 138; valosin containing protein lysine (K) methyltransferase
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0691,880,342 - 91,884,336 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.06101,330,561 - 101,336,079 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4691,602,980 - 91,610,509 (-)NCBIRGSC3.4rn4RGSC3.4
Celera686,533,202 - 86,537,196 (-)NCBICelera
Cytogenetic Map6q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Expression


Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Vcpkmt
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 7565188
Created: 2013-12-17
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.